Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001371-TA|BGIBMGA001371-PA|IPR002558|I/LWEQ
(697 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g03790.2 68416.m00389 ankyrin repeat family protein / regulat... 36 0.091
At3g03790.1 68416.m00388 ankyrin repeat family protein / regulat... 36 0.091
At3g02930.1 68416.m00288 expressed protein ; expression support... 34 0.28
At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR... 34 0.37
At5g51850.1 68418.m06428 expressed protein similar to unknown pr... 33 0.85
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 33 0.85
At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyo... 33 0.85
At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) si... 31 3.4
At1g50620.1 68414.m05688 PHD finger family protein contains Pfam... 31 3.4
At1g08540.1 68414.m00946 RNA polymerase sigma subunit SigB (sigB... 31 3.4
At1g25330.1 68414.m03143 basic helix-loop-helix (bHLH) family pr... 30 4.5
At4g14310.2 68417.m02205 peroxisomal membrane protein-related co... 30 6.0
At4g14310.1 68417.m02204 peroxisomal membrane protein-related co... 30 6.0
At1g33500.1 68414.m04146 hypothetical protein 30 6.0
At1g15690.1 68414.m01883 pyrophosphate-energized vacuolar membra... 30 6.0
At1g12830.1 68414.m01490 expressed protein 30 6.0
At1g04920.1 68414.m00489 sucrose-phosphate synthase, putative si... 30 6.0
At4g32180.1 68417.m04580 eukaryotic pantothenate kinase family p... 29 7.9
At4g04780.1 68417.m00700 expressed protein very low similarity t... 29 7.9
At4g02460.1 68417.m00333 DNA mismatch repair protein, putative s... 29 7.9
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 29 7.9
At1g16760.1 68414.m02013 protein kinase family protein contains ... 29 7.9
>At3g03790.2 68416.m00389 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1081
Score = 35.9 bits (79), Expect = 0.091
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Query: 165 ARQLGHATALLITNIKTEAEESPSDSQRXXXXXXXXXXDATARMVEAARQCASSPQDREK 224
+R L TA I +E EES SD R +++ Q
Sbjct: 650 SRPLPTPTATFPVVIDSEEEESESDILRTRDSHVKHFSSIGGTRMDSFLQPEDELTQHNS 709
Query: 225 QEV--LRKAAEELRFITADYAQGQDIVGSQVARLQE 258
+EV LRK +++ + A ++GQ + G Q+A+LQ+
Sbjct: 710 KEVRALRKKLQQIEILEAKQSRGQLLDGQQIAKLQK 745
>At3g03790.1 68416.m00388 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1078
Score = 35.9 bits (79), Expect = 0.091
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Query: 165 ARQLGHATALLITNIKTEAEESPSDSQRXXXXXXXXXXDATARMVEAARQCASSPQDREK 224
+R L TA I +E EES SD R +++ Q
Sbjct: 647 SRPLPTPTATFPVVIDSEEEESESDILRTRDSHVKHFSSIGGTRMDSFLQPEDELTQHNS 706
Query: 225 QEV--LRKAAEELRFITADYAQGQDIVGSQVARLQE 258
+EV LRK +++ + A ++GQ + G Q+A+LQ+
Sbjct: 707 KEVRALRKKLQQIEILEAKQSRGQLLDGQQIAKLQK 742
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 34.3 bits (75), Expect = 0.28
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 17/216 (7%)
Query: 209 VEAARQCASSPQDREKQEVLRKAAEELRFITADYAQGQDIVGSQVARLQESARQATSSAT 268
+ A R S PQ + +E L+KA E + + + A+ D Q+ ++ A +A+
Sbjct: 77 IRAVRVSESQPQSVQIKEDLKKANELIASLENEKAKALD----QLKEARKEAEEASEKLD 132
Query: 269 QLITSAQNATQ-YNTNRYS-QETLLEECKVLNEHLPRMVEAVNVSNVKPTQAAARLDLIS 326
+ + + + + + + ++ E +E + E L + +E NV N +++A L +
Sbjct: 133 EALEAQKKSLENFEIEKFEVVEAGIEAVQRKEEELKKELE--NVKNQHASESATLLLVTQ 190
Query: 327 ASEAFLQPSGHVISAARGALPTVSEPS--AAKHLADNTQLYTSSCADLRSAVSRAR---- 380
E Q + A AL + S AA H A+ ++ +S L++ + R
Sbjct: 191 ELENVNQELANAKDAKSKALCRADDASKMAAIH-AEKVEILSSELIRLKALLDSTREKEI 249
Query: 381 ISCKGLELDAAAEII--KSLQEELDELEEAVRAFDL 414
IS + L AEI+ K E LE V+ ++
Sbjct: 250 ISKNEIALKLGAEIVDLKRDLENARSLEAKVKELEM 285
>At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR
class), putative similar to zinc finger protein
(GI:15811367) [Arabidopsis thaliana]; similar to
TIR-NBS-LRR (GI:27466164) [Arabidopsis thaliana]; similar
to disease resistance protein RPP1-WsB (GI:3860165)
[Arabidopsis thaliana]
Length = 1996
Score = 33.9 bits (74), Expect = 0.37
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 222 REKQEVLRKAAEELRFITADYAQGQDIVGSQVARLQESARQATSSATQLITSAQNATQYN 281
++ V+ K +L+ + + D G+++ RL+++AR+A+ A + + + AT+
Sbjct: 1723 KKSNGVINKEMTKLQSQIKNLKEKCDNQGTEIQRLKKTAREASDLAVKHSSKHKAATEV- 1781
Query: 282 TNRYSQETLLEECKVLNEHLPRMVEAVNVSNVKPTQAAARLDLISASEAFL 332
+++ E + L E LP V +QA A L+ ASE+ L
Sbjct: 1782 -----MKSVAEHLRELKEKLPPEVSRCEAFESMNSQAEAYLNASEASESCL 1827
>At5g51850.1 68418.m06428 expressed protein similar to unknown
protein (emb|CAB81354.1)
Length = 590
Score = 32.7 bits (71), Expect = 0.85
Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 6/159 (3%)
Query: 255 RLQESARQATSSATQLITSAQNATQYNTNRYSQETLLEECKV-LNEHLPRMVEAVNVSNV 313
++ E R ++ A + +S+ + T+ N+ + ++ ++ +N ++ +N++ +
Sbjct: 385 QINERERLISNEAASIRSSSMHKTEKNSPQVARNHKFDDAATEINSEQDYIIRIMNLAGI 444
Query: 314 KP-TQAAARLDLISASEAFLQ-PSGHV-ISAARGALPTVSEPSAAKHLADNTQLYTSS-- 368
K +QA L + E F PSG + + R L + + +A Y S
Sbjct: 445 KSDSQAMLDLSIFRKLEHFGDYPSGTLALGCNRRLLFDLVNEILIETVAKRRGNYQGSEL 504
Query: 369 CADLRSAVSRARISCKGLELDAAAEIIKSLQEELDELEE 407
++L SAV+R C + + A +K L E+ +LEE
Sbjct: 505 ISELCSAVARYSTKCYPVPEEIALVDVKRLLEKKKKLEE 543
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 32.7 bits (71), Expect = 0.85
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 203 DATARMVEAARQCASSPQDREKQEVLRKAAE-ELRFITADYAQGQDI-VGSQVARLQESA 260
+A R +A R SSP ++ +++RK + L +TA+ + + I + + R Q+ A
Sbjct: 73 EALERAAKALRDINSSPHSKQVFDLMRKQEKTRLAELTAETSHYEAIQAHNDIGRQQKLA 132
Query: 261 R-QATSSATQLITSAQNAT-QYNTNRYSQETLLEECKVLNEHLPRMVEAVNVSNVK 314
Q TQ T AQN + R Q+T E + N L +M EA ++ K
Sbjct: 133 EDQRNLLQTQAQTKAQNLRYEDELARKRQQTDHEAQRHHNVELVKMQEASSIRKEK 188
>At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyosin
1 [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae};
similar to enterophilin-2L (GI:12718845) [Cavia
porcellus]; similar to latent nuclear antigen
(GI:5669894) [Human herpesvirus 8]; similar to multiple
ligand-binding protein 1 (GI:1403575) [Streptococcus
sp.]
Length = 326
Score = 32.7 bits (71), Expect = 0.85
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 368 SCADLRSAVSRARISCKGLELDAAAEIIKSLQEELDELEEAVRAF--DLKPLPGQTAEW 424
SCA + +++S G EL+ + E L+++L+ +EEA ++K L QT +W
Sbjct: 197 SCAKAKEDEIASKVSQIGEELEESNETTAKLKKKLESVEEAKETLEAEMKKLKVQTEQW 255
>At5g04890.1 68418.m00513 small heat shock-like protein (RTM2)
similar to 17.9 kDa heat-shock protein [Helianthus
annuus] GI:11990130; contains Pfam profile PF00011:
Hsp20/alpha crystallin family; supporting cDNA
gi|7407072|gb|AF208051.1|AF208051; identical to cDNA
small heat shock-like protein (RTM2) GI:7407072, small
heat shock-like protein [Arabidopsis thaliana]
GI:7407073
Length = 366
Score = 30.7 bits (66), Expect = 3.4
Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%)
Query: 207 RMVEAARQCASSPQDREKQEVLRKAAEELR-FITADYAQGQDIVGSQVARLQESARQATS 265
R++E +R+ ++ E +++ ++ EE I + + +++ +LQE A+
Sbjct: 133 RLLEESRR--KEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAKEEAEMRKLQEEAKAKEE 190
Query: 266 SATQLITSAQNATQYNTNRYSQETLLEECKVLNEHLPRMVEAVNVSNVKPTQAAARLDLI 325
+A + + A + R +E LEE K+ + L + + K + + I
Sbjct: 191 AAAKKLQEEIEAKEKLEERKLEERRLEERKLEDMKLAEEAKLKKIQERKSVDESGEKEKI 250
Query: 326 SASEAFLQPSGHV 338
E SGHV
Sbjct: 251 LKPEVVYTKSGHV 263
>At1g50620.1 68414.m05688 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 629
Score = 30.7 bits (66), Expect = 3.4
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 218 SPQDREKQEVLRKAAEELRFITAD-YAQGQDIVGSQVARLQESARQATSSATQLITSAQN 276
+P + EK+EV+RK A E R ++AD + I+ + + SA Q +S TQ +Q+
Sbjct: 531 NPPELEKKEVMRKDATE-RSVSADCQDKNSKIIAESSLQEEISASQTENSPTQ--PPSQS 587
Query: 277 ATQYNTNRYSQETLLEE 293
T ++ + + + EE
Sbjct: 588 DTDHSQQQKTTPNVEEE 604
>At1g08540.1 68414.m00946 RNA polymerase sigma subunit SigB (sigB) /
sigma factor 2 (SIG2) identical to sigma factor SigB
[Arabidopsis thaliana] GI:5478446, plastid RNA
polymerase sigma-subunit [Arabidopsis thaliana]
GI:2879922, sigma factor [Arabidopsis thaliana]
GI:2597831, sigma factor 2 (SIG2) [Arabidopsis thaliana]
GI:2353173; contains Pfam profiles PF04545: Sigma-70,
region 4, PF04539: Sigma-70 region 3, PF04542: Sigma-70
region 2
Length = 572
Score = 30.7 bits (66), Expect = 3.4
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 311 SNVKPTQAAARLDLISASEAFL-QPSGHVISAARGALPTVSEPSAAKHLADNTQLYTSSC 369
+ K +A A L+++ EA + + ++ AR A+ + + K+ ++NT L TSS
Sbjct: 86 TEAKYLEALASETLLTSDEAVVVAAAAEAVALARAAVKVAKDATLFKN-SNNTNLLTSST 144
Query: 370 ADLRS 374
AD RS
Sbjct: 145 ADKRS 149
>At1g25330.1 68414.m03143 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 223
Score = 30.3 bits (65), Expect = 4.5
Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Query: 559 LADSSHSFGQAFNNLLGVGMEMAGQTEDRETQSLMVNSMKSVTVNSSKLLGTAKSVSQDL 618
L D++H+ F NLL G E+ ++ S + +N + V
Sbjct: 47 LVDANHNNSHFFPNLLHGNTRRKGNKEESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRA 106
Query: 619 SRPNAKNQLTAAARAVTDSINKLVDACTQAAPG-HKACGAA 658
R A + + A R + IN+ + PG +KA G A
Sbjct: 107 KRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMA 147
>At4g14310.2 68417.m02205 peroxisomal membrane protein-related
contains weak similarity to Peroxisomal membrane protein
2 (22 kDa peroxisomal membrane protein)
(Swiss-Prot:P42925) [Mus musculus]
Length = 965
Score = 29.9 bits (64), Expect = 6.0
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 445 VISSGRQVLYSSLTLVETVKKQISSSEQVDSAALASIAKDITHGLEQTMEAVPSHTELDL 504
V S G V TVKKQ++SS QV ++ T+ L + + P H+ +
Sbjct: 829 VSSRGDSVFLGCTNQKSTVKKQMASSSQVQQFSIRKQRLVSTYSLPDS-NSHPHHSAITQ 887
Query: 505 AMENINETLNILNMGEF 521
N N + MG F
Sbjct: 888 VWGNSNFVMATSGMGLF 904
>At4g14310.1 68417.m02204 peroxisomal membrane protein-related
contains weak similarity to Peroxisomal membrane protein
2 (22 kDa peroxisomal membrane protein)
(Swiss-Prot:P42925) [Mus musculus]
Length = 1087
Score = 29.9 bits (64), Expect = 6.0
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 445 VISSGRQVLYSSLTLVETVKKQISSSEQVDSAALASIAKDITHGLEQTMEAVPSHTELDL 504
V S G V TVKKQ++SS QV ++ T+ L + + P H+ +
Sbjct: 802 VSSRGDSVFLGCTNQKSTVKKQMASSSQVQQFSIRKQRLVSTYSLPDS-NSHPHHSAITQ 860
Query: 505 AMENINETLNILNMGEF 521
N N + MG F
Sbjct: 861 VWGNSNFVMATSGMGLF 877
>At1g33500.1 68414.m04146 hypothetical protein
Length = 254
Score = 29.9 bits (64), Expect = 6.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 451 QVLYSSLTLVETVKKQISSSEQVDSAALASIAKDITHGLEQT 492
+ L S +T VE ++S EQ+ ++++ KD+ H L +T
Sbjct: 9 KTLRSQMTDVEDHAAKVSVEEQMQVTTISTLEKDLEHALSET 50
>At1g15690.1 68414.m01883 pyrophosphate-energized vacuolar membrane
proton pump / pyrophosphate-energized inorganic
pyrophosphatase (AVP-3) identical to
pyrophosphate-energized vacuolar membrane proton pump
(pyrophosphate-energized inorganic pyrophosphatase)
SP:P31414 from [Arabidopsis thaliana]
Length = 770
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 554 DDPRTLADSSHSFGQAFNNLLGVGMEMAGQTEDRETQSLMVNSMKSVTVN 603
DDPR A + + G ++ G+G ++ G + +L+V S+ S +N
Sbjct: 273 DDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAEASCAALVVASISSFGIN 322
>At1g12830.1 68414.m01490 expressed protein
Length = 213
Score = 29.9 bits (64), Expect = 6.0
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 242 YAQGQDIVGSQVARLQESARQATSSATQLITSAQNATQYNTNRYSQETLLEECKVLNEHL 301
+ Q QD V ++ +L S A S + T+ + N N ++ET+ E VL+E
Sbjct: 21 FCQDQDNVTNKAQKLNPSLNSADSESKDGETNGSGQIE-NLNSSTEETIGAESSVLSEKA 79
Query: 302 PRMVEAVNVSNV 313
VE+ + +V
Sbjct: 80 AEEVESGVIGDV 91
>At1g04920.1 68414.m00489 sucrose-phosphate synthase, putative
similar to GB:Y11795 from [Craterostigma plantagineum]
Length = 1062
Score = 29.9 bits (64), Expect = 6.0
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 378 RARISCKGLELDAAAEIIKSLQEELDELEEAVRAFDLK 415
+ RI + L LDAA +I S ++E+DE FD+K
Sbjct: 368 KRRIEAEELSLDAAELVITSTRQEIDEQWGLYDGFDVK 405
>At4g32180.1 68417.m04580 eukaryotic pantothenate kinase family
protein similar to pantothenate kinase [Emericella
nidulans] GI:4191500; contains Pfam profiles PF03630:
Fumble, PF01937: Protein of unknown function
Length = 901
Score = 29.5 bits (63), Expect = 7.9
Identities = 38/121 (31%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 295 KVLNEHLPRMVEAVNVSNVKPTQAAARLDLISASEAFLQPSGHVISAARGALPTVSEPSA 354
KVL+EHLP +V+ S A R D + + AF S H+ AR + EP+A
Sbjct: 552 KVLSEHLPDLVDTAVASEGGTEDAKRRGD--AFARAF---SAHL---AR----LMEEPAA 599
Query: 355 AKHLA-DNTQLYTSSCADLRSAVSRARISCKGLELDAAAEIIKSLQEELDELEEAVRAFD 413
L N C V R S K E +A+ ++ L EELD + E R
Sbjct: 600 YGKLGLANLLELREECLREFQFVDAYR-SIKQRENEASLAVLPDLLEELDSMSEEARLLT 658
Query: 414 L 414
L
Sbjct: 659 L 659
>At4g04780.1 68417.m00700 expressed protein very low similarity to
SP|Q13503 RNA polymerase II holoenzyme component SRB7
(RNAPII complex component SRB7) {Homo sapiens}
Length = 381
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 284 RYSQETLLEECKVLNEHLPRMVEAVNVSNVKPTQAAARLDLISASEAFLQPSGHVISAAR 343
++ E LL+E K++NE R+VE N+S+++ A ++L++ + Q +I
Sbjct: 64 KWVDEALLDEIKMVNEKCKRVVE--NISDLR-MNVMANMELLNKNAK--QMEEELIKKME 118
Query: 344 GALPTVSE 351
G L T+ E
Sbjct: 119 GELLTMKE 126
>At4g02460.1 68417.m00333 DNA mismatch repair protein, putative
similar to SP|P54278 PMS1 protein homolog 2 (DNA
mismatch repair protein PMS2) {Homo sapiens}; contains
Pfam profiles PF02518: ATPase, histidine kinase-, DNA
gyrase B-, and HSP90-like domain protein, PF01119: DNA
mismatch repair protein, C-terminal domain
Length = 923
Score = 29.5 bits (63), Expect = 7.9
Identities = 23/87 (26%), Positives = 37/87 (42%)
Query: 446 ISSGRQVLYSSLTLVETVKKQISSSEQVDSAALASIAKDITHGLEQTMEAVPSHTELDLA 505
+ G +YSS V + +SEQ D A ++S K E + V S T L A
Sbjct: 340 LREGLNEIYSSSNASYIVNRFEENSEQPDKAGVSSFQKKSNLLSEGIVLDVSSKTRLGEA 399
Query: 506 MENINETLNILNMGEFPPTDSSYGELQ 532
+E N +L + + P + E++
Sbjct: 400 IEKENPSLREVEIDNSSPMEKFKFEIK 426
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 29.5 bits (63), Expect = 7.9
Identities = 48/260 (18%), Positives = 99/260 (38%), Gaps = 17/260 (6%)
Query: 157 GPADMLRHARQLGHATALLITNIKTEAEESP-----SDSQRXXXXXXXXXXDATARMVEA 211
G D H Q L+ +K EE P S++ ++T R++E
Sbjct: 183 GITDWKSHRMQAVERRKLIEEELKKIHEEIPEYKTHSETAEAAKLQVLKELESTKRLIEQ 242
Query: 212 ARQCASSPQDREKQEVLRKAAEELRFITADYAQGQDIVGSQVARLQESARQATSSATQLI 271
+ Q E+Q +LR + +D+ + A+L+ + + T++ T+L
Sbjct: 243 LKLNLDKAQTEEQQAKQDSELAKLRVEEMEQGIAEDVSVAAKAQLEVAKARHTTAITELS 302
Query: 272 TSAQNA----TQYNTNRYSQETL---LEECKVLNEHLPRMVEAVNVSNVKPTQAAARLDL 324
+ + +Y+ ++ +EE + ++ + + VE + + + T+ +
Sbjct: 303 SVKEELETLHKEYDALVQDKDVAVKKVEEAMLASKEVEKTVEELTIELI-ATKESLESAH 361
Query: 325 ISASEAFLQPSGHVISAARGALPTVSEPSAAKHLADNTQLYTSSCADLRSAVSRARISCK 384
S EA Q G ++ + E A+ S DL+S + A
Sbjct: 362 ASHLEAEEQRIGAAMARDQDTHRWEKELKQAEEELQRLNQQIHSSKDLKSKLDTA----S 417
Query: 385 GLELDAAAEIIKSLQEELDE 404
L LD AE++ ++ +L +
Sbjct: 418 ALLLDLKAELVAYMESKLKQ 437
>At1g16760.1 68414.m02013 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 758
Score = 29.5 bits (63), Expect = 7.9
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 243 AQGQDIVGSQVARLQESARQA----TSSATQLITSAQNATQYNTNRYSQETLLEECKVLN 298
+Q + V +Q+ RL+ +Q +S+ + +T+ AT+ R +E LEE K+
Sbjct: 319 SQSLNDVEAQMKRLRLELKQTMDMYSSACREALTARNEATELQKLRTEEERRLEELKMTE 378
Query: 299 EHLPRMVEAVNVSNVKPTQAAARLDLISASEA 330
E +VE +AA + ++ EA
Sbjct: 379 ETAMSIVENERAKAKTALEAAEAANRLAEVEA 410
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.123 0.331
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,194,274
Number of Sequences: 28952
Number of extensions: 346036
Number of successful extensions: 974
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 969
Number of HSP's gapped (non-prelim): 22
length of query: 697
length of database: 12,070,560
effective HSP length: 86
effective length of query: 611
effective length of database: 9,580,688
effective search space: 5853800368
effective search space used: 5853800368
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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