Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001370-TA|BGIBMGA001370-PA|IPR000299|Band 4.1
(1027 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1509 - 34074206-34074398,34074506-34074777,34075411-340756... 42 0.002
07_03_0163 + 14588041-14588266,14588835-14589001,14589880-145900... 35 0.39
02_05_0968 + 33156585-33156941,33158510-33159902,33160035-331601... 33 0.89
06_03_1450 + 30246702-30247346,30248603-30248689,30248789-302489... 33 1.2
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 32 2.7
03_02_0542 - 9348126-9349585,9352433-9352655 31 3.6
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409... 31 4.7
12_01_0715 - 6230393-6231559,6233234-6234553 31 6.3
11_01_0768 - 6442332-6443792 30 8.3
03_05_0674 + 26619579-26619658,26620020-26620746,26620999-266214... 30 8.3
02_01_0462 + 3332464-3332470,3333606-3335806 30 8.3
>04_04_1509 -
34074206-34074398,34074506-34074777,34075411-34075608,
34076092-34076187,34076318-34076500,34076597-34076799,
34076887-34077013,34077098-34077292,34077400-34077540,
34077669-34077812,34077876-34078040,34078776-34078976,
34079049-34079195,34079275-34079427,34079731-34079833,
34079954-34080069,34080168-34080349,34080442-34080541,
34081200-34081527,34081605-34081834,34081979-34082110,
34082787-34082859,34083274-34083338
Length = 1248
Score = 42.3 bits (95), Expect = 0.002
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 16/224 (7%)
Query: 152 LLLRRKLFY-SDRNVDSRDPVQLTLLYVQARDAILAGAHPTTQEKACEFAGIQCQIQFGD 210
L+ +++LF SD + DP+ + L YVQ + + G +P ++ A + + +Q ++ G
Sbjct: 344 LVFKKRLFRESDEAIT--DPMFVQLSYVQLQHDYILGNYPVGRDDAAQLSALQILVEIGF 401
Query: 211 HREDKHTPGFLDLKE-FLP--ASYVKVK-GIEKKVFREHKKHVGLSELDAKVLYTKTARD 266
+ ++ L E FLP + + K E + ++ LS+ DA+ + + R
Sbjct: 402 VDNPESCVEWISLLERFLPRQVAITRAKRDWELDIVSRYQLMEHLSKDDARQQFLRILRT 461
Query: 267 LKTYGVAFFLVKEKMKGKNKLVPR--LLGVTKDSVLRLDEKTKEILQTWPLTTVRRWCAS 324
L YG + F K+ L+P +LG+ K V KE L + L + ++ S
Sbjct: 462 L-PYGNSVFFSVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQF-GS 519
Query: 325 PNT---FTLDFGDYSDQYYSVQTTEAEQILQVIAGYI-DIIVRK 364
NT F + + +T + E+I + +I D+++R+
Sbjct: 520 SNTAVFFKMRVAGVL-HIFQFETKQGEEICVALQTHINDVMLRR 562
>07_03_0163 +
14588041-14588266,14588835-14589001,14589880-14590068,
14590193-14590315,14590531-14590793,14590882-14590976,
14591529-14591965,14592461-14592481
Length = 506
Score = 34.7 bits (76), Expect = 0.39
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Query: 832 NNIDKNDINDRFNRYKDKKIECHSIRNDVTKSGPDVSVAGALNLKILNPDRYNRVLTTKE 891
NN +D+ Y+D++ +R KSG ++ G+ + L+P R + K+
Sbjct: 48 NNYGSSDVGSYEYDYEDEEDYKEELRVPGNKSGSNMGARGSSHPTPLHPHREEKEGREKK 107
Query: 892 TFYEESEASFTKTSLSK--LKNDRFENFVKKS-EKYYTSSDGSDRKTEILNNSEGQLRPK 948
EE E + L N +K++ YY+SS +D I N S+ + RP+
Sbjct: 108 RGVEEEEDVPPSPPFLEPPLHGTNIINMLKRTLLTYYSSSSNTDPSASIENLSQPK-RPR 166
Query: 949 TE 950
E
Sbjct: 167 AE 168
>02_05_0968 +
33156585-33156941,33158510-33159902,33160035-33160118,
33160216-33160265
Length = 627
Score = 33.5 bits (73), Expect = 0.89
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 9/146 (6%)
Query: 404 VNTESVAKPAVHRPGAEGAKPFAVGHVTGAQLTTVS--GQVVTGHAPPAASQVQQTKVTS 461
++ E P RP GA V VTG TT + +V +GH A + +
Sbjct: 169 LSQEPPPPPTSERPTTAGAGSHRVARVTGGGATTTAPKPRVFSGHRSSTAKEHGSSSAKG 228
Query: 462 ILTEPQ--RALLTTITSGREIIKQTEEGLSRTTLPELGGDASSVKWKQSTL--DTNKQAV 517
T+P+ R+L +SG ++ +E + T + A S +Q+T+ +T +
Sbjct: 229 GTTKPKPPRSLPRRSSSGG--LENLKEAVLSNTCAAV-APAQSCSTEQATVHGETGNASP 285
Query: 518 SSQIAAMNAATAQVVTLTAGPTEEVD 543
S A AA A+ + + E VD
Sbjct: 286 PSPFAGAAAANARAASPDSDCGEAVD 311
>06_03_1450 +
30246702-30247346,30248603-30248689,30248789-30248920,
30249016-30249162,30250375-30250440,30250519-30250629,
30251551-30251584,30251667-30251743,30251829-30251906
Length = 458
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 271 GVAFFLVKEKMKGKNKLVPRLLGVTKDSVLRLDEKTKEILQTWPLTTVRRW 321
GV F VK +G + L V D + LD T L+ +PL TV RW
Sbjct: 193 GVQKFRVKLLPEGAGSPMDVLCQVGLDGIRMLDPNTSRTLRIYPLETVTRW 243
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 31.9 bits (69), Expect = 2.7
Identities = 45/216 (20%), Positives = 86/216 (39%), Gaps = 16/216 (7%)
Query: 452 SQVQQTKVTSILTEPQRALLTTITSGREIIKQTEEGLSRTT-----LPELGGD----ASS 502
S + K + T+ + L + + S +E I++ E L+ + L EL + A+
Sbjct: 151 SLADKDKELADATQSLKELGSELESSKERIQEIEAELAASADKLHKLEELKDERSLHAAQ 210
Query: 503 VKWKQSTLDTNKQAVSSQIAAMNAATAQVVTLTAGPTEE-VDHTAVGAAITTITSNLPEV 561
+ S LD + + M A + + G ++ +DH V ++ + S L V
Sbjct: 211 EAKRASELDKTLETAQLNMKEMEAQISSLQEEIKGHQDKAIDHQQVEESLRSTLSELKMV 270
Query: 562 TRGVRMIAALMDDSDNGDRLLDATRKLCTAFTDLLKAAEPETKEPRQNLLNAASRVGEAS 621
+ + + +DD + DA T L +++E KE L N S E
Sbjct: 271 QEALELSKSQVDDLEQKLASQDANISHLTEELSLHRSSEESLKEKTLKLENELSSAHEEL 330
Query: 622 TSVLYTIG------EETEEDKQTQVTEPDKKKKSFL 651
+ + + EE ++KQT +K+++ L
Sbjct: 331 QAKILNLQEMEIKLEEQAKEKQTWEATLEKQQEQIL 366
>03_02_0542 - 9348126-9349585,9352433-9352655
Length = 560
Score = 31.5 bits (68), Expect = 3.6
Identities = 23/127 (18%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 812 SVNLHRRTKNDILRQRFFLSNNIDKNDINDRFNRYKDKKIECHSIRNDVTKSGPDVSVAG 871
SV + R T + RQ+ + ++ ++ + N + ++ + ++ +G + G
Sbjct: 429 SVLIPRNTTIPVSRQKMYTTHYDNETAVLINVNEGEGRRTKDNNPLGKFVLTGIPPAPRG 488
Query: 872 ALNLKILNPDRYNRVL--TTKETFYEESEASFTKTSLSKLKNDRFENFVKKSEKYYTSSD 929
+ + YN ++ + ++ S + K+ +L + E VKK+EKY +
Sbjct: 489 VPQINVTFSIDYNGIMNVSAEDKTTGRSNSITIKSDKGRLSKEEIERMVKKAEKYKAEDE 548
Query: 930 GSDRKTE 936
+K E
Sbjct: 549 EEMKKAE 555
>09_03_0218 +
13539481-13540082,13540171-13540276,13540645-13540960,
13541187-13541263,13541269-13541895,13542783-13543112,
13543442-13543747,13543824-13543896,13544004-13544089,
13544219-13544396,13545311-13545756
Length = 1048
Score = 31.1 bits (67), Expect = 4.7
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 540 EEVDHTAVGAAITTITSNLPEVTRGVRMIAALMDDSDNGDRLLDA 584
EE D V AA + TS +P ++ + L D D G RLL A
Sbjct: 924 EETDGAVVSAAARSCTSRIPVLSTAAVELHLLERDDDGGRRLLGA 968
>12_01_0715 - 6230393-6231559,6233234-6234553
Length = 828
Score = 30.7 bits (66), Expect = 6.3
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 369 EHLGIEGDEGSAMLEDSV--SPSKANIIQHDTFKSGKVNTESVAKPAVHRPGAEGAKPFA 426
++LGI G+ ++ DS S S +N T N S+ + A+ G G P +
Sbjct: 315 KNLGISGNLPTSFSGDSSLQSLSVSNTNFSGTIPGSISNLRSLKELALGASGFSGVLPSS 374
Query: 427 VGHVTGAQLTTVSGQVVTGHAPPAASQVQQTKV 459
+G + L VSG + G P S + V
Sbjct: 375 IGQLKSLSLLEVSGLELVGSIPSWISNLTSLTV 407
>11_01_0768 - 6442332-6443792
Length = 486
Score = 30.3 bits (65), Expect = 8.3
Identities = 36/177 (20%), Positives = 60/177 (33%), Gaps = 3/177 (1%)
Query: 383 EDSVSPSKANIIQHDTFKSGKVNTESVAKPAVHRPGAEGAKPFAVGHVTGAQLTTVSGQV 442
+ SP+ + T + + PA A+ A A G T + T+++ +
Sbjct: 305 DKETSPAAESTADTATSAAAGPTADKETSPAAEST-ADTATSAAAGS-TADKETSLAAEP 362
Query: 443 VTGHAPPAASQVQQTKVTSILTEPQRALLTTITSGREIIKQTEEGLSRTTLPELGGDASS 502
A A + K TS EP T+ +G K+T T A S
Sbjct: 363 TADTATSAVAGSTADKETSPAAEPTADTATSAAAGSTADKETSPAAESTVDTATSAAAGS 422
Query: 503 VKWKQSTLDTNKQAVSSQIAAMNAATAQVVTLTAGPTEEVDHTAVGAAITTITSNLP 559
K+ T + V + +A+ +TA T A + T+ A + P
Sbjct: 423 TADKE-TSPAAESTVDKETSAVAGSTADKNTYPAAGSAAEKETSSAAGSAPVVDTAP 478
>03_05_0674 +
26619579-26619658,26620020-26620746,26620999-26621486,
26621746-26621902,26621975-26621998
Length = 491
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/69 (27%), Positives = 30/69 (43%)
Query: 527 ATAQVVTLTAGPTEEVDHTAVGAAITTITSNLPEVTRGVRMIAALMDDSDNGDRLLDATR 586
AT + + D+TA+ A+TT+ LPE R + L+D G RL
Sbjct: 161 ATLNAIETLSNYQPSSDNTAIKIALTTLIVTLPEAVRFRPIRYRLLDGWFTGTRLTSHLA 220
Query: 587 KLCTAFTDL 595
K ++ D+
Sbjct: 221 KEVVSWRDM 229
>02_01_0462 + 3332464-3332470,3333606-3335806
Length = 735
Score = 30.3 bits (65), Expect = 8.3
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
Query: 369 EHLGIEGDEGSAMLEDSVSPSKANIIQ--------HDTFKSGKVNTESVAKPAVHRPGAE 420
EHL + G+ S + DS+ N+ H + + + + +HR
Sbjct: 180 EHLDLSGNAFSGPIPDSLPEIAPNLRHLDLSYNGFHGSIPHSLSRLQKLRELYLHRNNLT 239
Query: 421 GAKPFAVGHVTGAQLTTVSGQVVTGHAPPAASQVQQTKVTSI 462
A P +G++T + +S + G PP+ +++QQ +I
Sbjct: 240 RAIPEELGNLTNLEELVLSSNRLVGSLPPSFARMQQLSFFAI 281
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.131 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,274,162
Number of Sequences: 37544
Number of extensions: 1157011
Number of successful extensions: 2571
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2565
Number of HSP's gapped (non-prelim): 14
length of query: 1027
length of database: 14,793,348
effective HSP length: 89
effective length of query: 938
effective length of database: 11,451,932
effective search space: 10741912216
effective search space used: 10741912216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 65 (30.3 bits)
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