Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001370-TA|BGIBMGA001370-PA|IPR000299|Band 4.1
(1027 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g42500.2 68415.m05259 serine/threonine protein phosphatase PP... 34 0.42
At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacu... 33 0.74
At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacu... 33 0.74
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 33 0.74
At1g51900.1 68414.m05850 hypothetical protein 33 0.74
At2g44200.1 68415.m05500 expressed protein 33 0.98
At1g74890.1 68414.m08681 two-component responsive regulator / re... 33 1.3
At1g56100.1 68414.m06442 pectinesterase inhibitor domain-contain... 33 1.3
At5g63550.1 68418.m07976 expressed protein 32 1.7
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 31 3.9
At3g49670.1 68416.m05429 leucine-rich repeat transmembrane prote... 31 5.2
At3g21290.1 68416.m02690 dentin sialophosphoprotein-related cont... 31 5.2
At3g21230.1 68416.m02683 4-coumarate--CoA ligase, putative / 4-c... 31 5.2
At5g44570.1 68418.m05461 hypothetical protein 30 6.9
At3g49500.1 68416.m05410 RNA-dependent RNA polymerase (SDE1) ide... 30 6.9
At4g12400.1 68417.m01960 stress-inducible protein, putative simi... 30 9.1
>At2g42500.2 68415.m05259 serine/threonine protein phosphatase
PP2A-3 catalytic subunit (PP2A3) identical to SP|Q07100
Serine/threonine protein phosphatase PP2A-3 catalytic
subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains
Pfam profile PF00149: Ser/Thr protein phosphatase
Length = 266
Score = 34.3 bits (75), Expect = 0.42
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 294 VTKDSVLRLDEKTKEILQTWPLTTVRRWCASPNTFTLDFGDYSDQ-YYSVQT 344
+ D+ + LDE+ +++Q PL+ + C P+T L GDY D+ YYSV+T
Sbjct: 6 IPTDATIDLDEQISQLMQCKPLS--EQQC--PDTNYLFMGDYVDRGYYSVET 53
>At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacum,
EMBL:AB009883
Length = 918
Score = 33.5 bits (73), Expect = 0.74
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 81 EYGLVREEQKEEPDPCEKPNYGTLTLKRKHQEKERDAKMEQLRKKLRTDDE 131
EY ++++ EPD CEK T K K +E++ D++ E+ K+ R ++
Sbjct: 455 EYVAPEQKKQNEPDNCEKDERET---KEKRRERDGDSEAERAEKRSRISEK 502
>At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacum,
EMBL:AB009883
Length = 918
Score = 33.5 bits (73), Expect = 0.74
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 81 EYGLVREEQKEEPDPCEKPNYGTLTLKRKHQEKERDAKMEQLRKKLRTDDE 131
EY ++++ EPD CEK T K K +E++ D++ E+ K+ R ++
Sbjct: 455 EYVAPEQKKQNEPDNCEKDERET---KEKRRERDGDSEAERAEKRSRISEK 502
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 33.5 bits (73), Expect = 0.74
Identities = 36/179 (20%), Positives = 75/179 (41%), Gaps = 10/179 (5%)
Query: 450 AASQVQQTKVTSILTEPQRALLTTITSGREIIKQTEEGLSRTTLPELGGDASSVKWKQST 509
+A + T++T+++ E + + + + S I + L T+ + DA + K+
Sbjct: 339 SAIEELNTRITTLVAEKE-SYIQKLDS----ISKDYSALKLTSETQAAADAELISRKEQE 393
Query: 510 LDTNKQAVSSQIAAMNAATAQVVTLTAGPTEEVDHTAVGAAITTITSNLPEVTRGVRMIA 569
+ + + + +N + +V LT E + +TT+ + E+ + +
Sbjct: 394 IQQLNENLDRALDDVNKSKDKVADLTE--KYEDSKRMLDIELTTVKNLRHELEGTKKTLQ 451
Query: 570 ALMDDSDNGDRLLDATRKLCTAFTDLLKAAEPETKEPRQNL---LNAASRVGEASTSVL 625
A D + + +LD +R LC+ L E KE ++ L+A + E S S L
Sbjct: 452 ASRDRVSDLETMLDESRALCSKLESELAIVHEEWKEAKERYERNLDAEKQKNEISASEL 510
>At1g51900.1 68414.m05850 hypothetical protein
Length = 774
Score = 33.5 bits (73), Expect = 0.74
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 918 VKKSEKYYTSSDGSDRKTEILNNSEGQLRPKTEIRIVYNPTF--RVRGGHDRGARPCSSP 975
V K ++ + + S+ K + +S L P TE R + + T+ R +G H R R +SP
Sbjct: 590 VGKDQRVFRFRESSEEKRK---SSSSPLSPLTEFRDMESLTYYMRQKGMHRRRRRSSTSP 646
Query: 976 RCCQH 980
CC +
Sbjct: 647 HCCHN 651
>At2g44200.1 68415.m05500 expressed protein
Length = 493
Score = 33.1 bits (72), Expect = 0.98
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 78 NYDEYGLVREEQKEEPDPCEKPN-YGTLTLK--RKHQEKERDAKMEQLRKKLRTDDEVNW 134
N YG +++K E KPN Y K K E+ER A+++Q++ +E W
Sbjct: 366 NLKSYGQEDKKRKAEDLDSGKPNEYQNRRRKGGSKLSEEERAARLKQMQMDAEVHEEQRW 425
Query: 135 VEGSLTLREQGVEAGETLLLRRKLFYSDRN 164
VEA + + K F D N
Sbjct: 426 TRLKKADETDAVEADKNKVSTGKSFLDDAN 455
>At1g74890.1 68414.m08681 two-component responsive regulator /
response regulator 15 (ARR15) identical to response
regulator 15 GI:11870065 from [Arabidopsis thaliana];
contains Pfam profile: PF00072 response regulator
receiver domain
Length = 206
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 348 EQILQVIAGYIDIIVRKQRAKEHLGIEGDEGSAMLEDSVSPSKANIIQHDTFKSGKVNTE 407
E++L++ A + + RA ++LG++GD GS+ L+D K N+I D G E
Sbjct: 34 ERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKD----LKVNLIVTDYSMPGLTGYE 89
Query: 408 SVAK 411
+ K
Sbjct: 90 LLKK 93
>At1g56100.1 68414.m06442 pectinesterase inhibitor domain-containing
protein contains TIGRFAM TIGR01614: pectinesterase
inhibitor domain; contains weak hit to Pfam PF04043:
Plant invertase/pectin methylesterase inhibitor
Length = 232
Score = 32.7 bits (71), Expect = 1.3
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 58 DDSQIVANLMVVICTKIGITNYDEYGLVREEQKEEPDPCEKPNYGTLTLKRKHQEKERDA 117
DD++ + VV T I N E L +E+ +E EKP K+K Q K R
Sbjct: 129 DDAEKEGIIDVVNATSEAIENETEVDL-KEKDGDEEAKSEKPK------KKKEQRKSRFK 181
Query: 118 KMEQLRKKLRTDDEVNWVEGSLTLREQGVE 147
KME L ++VN L ++ G+E
Sbjct: 182 KMESLSSITMKSEDVN--HDQLPSKQSGLE 209
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 80 DEYGLVREEQKE-EPDPCEKPNYGTLTLKRKHQEKERDAKMEQLRKKLRTDD 130
+E +V +E+KE E + + P G ++K E+E +AK +L +K + DD
Sbjct: 19 EEIDVVPKEEKEVEKEKVDSPRIGEAEEEKKEDEEEGEAKEGELGEKDKEDD 70
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 1102
Score = 31.1 bits (67), Expect = 3.9
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 85 VREEQKEEPDPCEKPNYGTLTLKRKHQEKERDAKMEQ--LRKKLRTDDEVNWVEGSLTLR 142
V +E EP P + L +++ + K+++ EQ L RT +V+W +G++ R
Sbjct: 411 VSKEPVHEPWPLHRKKIRKLVIRKDKKVKKKEESFEQALLVVNSRTRVDVSWQDGTIECR 470
Query: 143 EQGV 146
+ +
Sbjct: 471 REAI 474
>At3g49670.1 68416.m05429 leucine-rich repeat transmembrane protein
kinase, putative CLAVATA1 receptor kinase, Arabidopsis
thaliana, EMBL:ATU96879
Length = 1002
Score = 30.7 bits (66), Expect = 5.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 421 GAKPFAVGHVTGAQLTTVSGQVVTGHAPPAASQVQQ 456
G+ P A+G+++G Q + G +G PP ++QQ
Sbjct: 470 GSLPAAIGNLSGVQKLLLDGNKFSGSIPPEIGRLQQ 505
>At3g21290.1 68416.m02690 dentin sialophosphoprotein-related contains
weak similarity to Dentin sialophosphoprotein precursor
(Swiss-Prot:Q9NZW4) [Homo sapiens]
Length = 1192
Score = 30.7 bits (66), Expect = 5.2
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 838 DINDRFNRYKDKKIECHSIRNDVTKSGPDVSVAGALNLKILNPDRYNRVL-TTKETFYEE 896
+ ND+++ Y S RND K G D+ A K + +RYN+++ KE++ +
Sbjct: 1103 EYNDKYDSYHSINKILESHRNDFQKLGQDLGFA-----KGRDVERYNKIVEQIKESYCKY 1157
Query: 897 SEASFTKTSLSKLKNDRFENFVKKSEKYYTSSDGSD 932
E + + ++ ++ +K+ + Y SS G D
Sbjct: 1158 GERHKRLKKVFVVLHEELKH-LKQRMRDYASSHGKD 1192
>At3g21230.1 68416.m02683 4-coumarate--CoA ligase, putative /
4-coumaroyl-CoA synthase, putative (4CL) similar to 4CL2
[gi:12229665] and 4CL1 [gi:12229649] from [Arabidopsis
thaliana], 4CL1 [gi:12229631] from Nicotiana tabacum
Length = 570
Score = 30.7 bits (66), Expect = 5.2
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 567 MIAALMDDSDNGDRLLDATRKLCTAFTDLLKAAEPETKEPR 607
+I L DD DNG ++ ++ C +FT+L +A E E +P+
Sbjct: 168 LIVCLDDDGDNG--VVSSSDDGCVSFTELTQADETELLKPK 206
>At5g44570.1 68418.m05461 hypothetical protein
Length = 133
Score = 30.3 bits (65), Expect = 6.9
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 512 TNKQAVSSQIAAMNAATAQVVTLTAGPTEEVDHTAVGAA-ITTITSNLPEVTRGVRMIA 569
T K++ S I + +AA A T P E HT+ AA +TT N +T ++
Sbjct: 39 TIKKSKRSSIQSTDAACAAATTTAPAPDAECSHTSPNAAVVTTAAENACIITAATNALS 97
>At3g49500.1 68416.m05410 RNA-dependent RNA polymerase (SDE1)
identical to RNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|8248473|gb|AAF74208
Length = 1196
Score = 30.3 bits (65), Expect = 6.9
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 222 DLKEFLPASYVKVKGIEKKVFREH-KKHVGLSELDAKVLYTKTA 264
+LKE L SY +K +KVF E H LSE + +LY K A
Sbjct: 1082 ELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKA 1125
>At4g12400.1 68417.m01960 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 530
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/64 (23%), Positives = 36/64 (56%)
Query: 55 LLVDDSQIVANLMVVICTKIGITNYDEYGLVREEQKEEPDPCEKPNYGTLTLKRKHQEKE 114
L + D +++ L V++ K G ++ ++ + ++++EP+P +P T ++K + KE
Sbjct: 169 LYMKDKRVMKALGVLLNVKFGGSSGEDTEMKEADERKEPEPEMEPMELTEEERQKKERKE 228
Query: 115 RDAK 118
+ K
Sbjct: 229 KALK 232
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.131 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,495,777
Number of Sequences: 28952
Number of extensions: 992340
Number of successful extensions: 2398
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2388
Number of HSP's gapped (non-prelim): 21
length of query: 1027
length of database: 12,070,560
effective HSP length: 88
effective length of query: 939
effective length of database: 9,522,784
effective search space: 8941894176
effective search space used: 8941894176
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 64 (29.9 bits)
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