Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001369-TA|BGIBMGA001369-PA|IPR001254|Peptidase S1 and
S6, chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine
         (284 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   3.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   6.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   6.0  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 158 FSTKASVFDRNPPETDVLTAVLWKTVAA 185
           F T  ++ D +    +VLT ++WKT  A
Sbjct: 62  FITHLALADLSVGLINVLTDIIWKTTVA 89


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 245 KIVGVLAVKPRDCDTKYAIFTNVSFYR 271
           KI GV+ V      T Y+I+   ++YR
Sbjct: 44  KIQGVVLVSIIAAGTAYSIYVRHTYYR 70


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 245 KIVGVLAVKPRDCDTKYAIFTNVSFYR 271
           KI GV+ V      T Y+I+   ++YR
Sbjct: 44  KIQGVVLVSIIAAGTAYSIYVRHTYYR 70


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.136    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,335
Number of Sequences: 317
Number of extensions: 2837
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 3
length of query: 284
length of database: 114,650
effective HSP length: 56
effective length of query: 228
effective length of database: 96,898
effective search space: 22092744
effective search space used: 22092744
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)