Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001369-TA|BGIBMGA001369-PA|IPR001254|Peptidase S1 and
S6, chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine
(284 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 41 0.001
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.005
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 38 0.009
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 37 0.022
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 35 0.087
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.20
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 33 0.27
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.35
SB_29461| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_37495| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_32915| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 31 0.81
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.4
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.4
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 31 1.4
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 30 1.9
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.9
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.9
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.5
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.3
SB_30609| Best HMM Match : Filamin (HMM E-Value=0.032) 29 4.3
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 28 7.6
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 28 7.6
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 41.1 bits (92), Expect = 0.001
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 14/207 (6%)
Query: 84 SCFASVILVKWIVTSAHCVKRDTKHRLLL-FHDYTKNYSHTYPVLYWKLHQKYNVSKPTL 142
+C A++I W +T+AHCV R K+ +++ H + + ++++ S
Sbjct: 352 TCGATLIRPGWAITAAHCVMRPDKYTVIVGSHSRDASEPSAQNIKVRRVYRHRGFSMANY 411
Query: 143 RHDVAVAKLNVD-FYPFSTKASVFDRNPPETDVLTAVL-WKTVAAIDKKMYLTNDFDKIE 200
D+A+ +L + P+ + + W + ++ + LT + +
Sbjct: 412 VDDIALLELERSAVINDKVSTACLPSGEPKVGAICYIAGWGRLQSLG-DVALT--LQQAK 468
Query: 201 VQITSYNRCFESYGVDL-DASLICIDL-TE--YEECFVHEFGPLYYEDKIVGVL---AVK 253
V I S C +YG + S IC+ TE C GPL E++ VL
Sbjct: 469 VPIVSKEDCKRAYGAIIRPYSHICVGFNTENAASSCQGDSGGPLVCEEEGRWVLHGATSF 528
Query: 254 PRDCDTK-YAIFTNVSFYRDWILKSTG 279
+ C K Y+++T V+ Y WI G
Sbjct: 529 GKSCSPKHYSVYTRVNSYMKWIFDRIG 555
Score = 35.1 bits (77), Expect = 0.066
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 203 ITSYNRCFESY-GVDLDASLICIDLTEYEE--CFVHEFGPLYYEDK----IVGVLAVKPR 255
I S+N C Y GV A L + C GPL ED + G ++
Sbjct: 230 IASHNDCKNKYYGVSSTAHLCAGEARSGASGGCNGDSGGPLVCEDNGRWYLHGAVSYGKL 289
Query: 256 DCDTKY-AIFTNVSFYRDWILKSTGTTC 282
C T Y +F V+ Y DWI + TG C
Sbjct: 290 HCPTTYYTVFARVASYTDWIKQVTGPIC 317
Score = 29.1 bits (62), Expect = 4.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 84 SCFASVILVKWIVTSAHCVKRDTK 107
SC ++I +W+VT++HCV ++ +
Sbjct: 55 SCGGTLISDRWVVTASHCVHKNPR 78
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 38.7 bits (86), Expect = 0.005
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 72 AVVANTSGIWSFSCFASVILVKWIVTSAHCV--KRDTKHRLLL-FHDYTKNYSHTYPVLY 128
A + +TSG + F C S+I +W++T+ HCV +R T + L H+ N +
Sbjct: 679 AQLRSTSG-FPF-CGGSLIHPQWVLTATHCVSSRRPTDLNIRLGAHNRRANLGMEQDIKV 736
Query: 129 WKLHQKYNVSKPT-LRHDVAVAKL----NVDFYPFS-TKASVFDRNPP 170
K+ KP L HD+A+ KL N++ +P S T ASV N P
Sbjct: 737 EKIIMHPGYRKPVGLAHDIALIKLLKPANLNRFPTSTTSASVDQTNIP 784
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 82 SFSCFASVILVKWIVTSAHCV--KRDTKHRLLLFHDYTKN----YSHTYPVLYWKLHQKY 135
SF C S++ W+VT+AHC+ T ++ ++ +N T+ V H Y
Sbjct: 90 SFICGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPTY 149
Query: 136 NVSKPTLRHDVAVAKLN 152
N P L +D+A+ +L+
Sbjct: 150 N--SPQLSNDIALIELS 164
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/90 (24%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 67 FPYVGAVVANTSGIWSFSCFASVILVKWIVTSAHCVKRD---TKHRLLL-FHD-YTKNYS 121
+P+ ++ + W+ C ++I +W+VT+AHCV ++ + +++ L HD + +
Sbjct: 296 WPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHCVFQNIEPSNYKIKLGAHDRESSEGA 355
Query: 122 HTYPVLYWKLHQKYNVSKPTLRHDVAVAKL 151
T PV +H ++ ++ + +D+A+ KL
Sbjct: 356 LTIPVTAIHMHTRF-MTDGSYGYDIAIMKL 384
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 65 ERFPYVGAVVANTSGIWSFSCFASVILVKWIVTSAHCV--KRDTKHRLLLFHDYTKNY-- 120
+ +P+ ++ + G + C ++I +W+VT+AHCV + D H ++ D+ ++
Sbjct: 53 QSWPWQVHLLQSRDGSFLHKCGGALIDREWVVTAAHCVFQEPDVSHYKVILGDFNRDIKE 112
Query: 121 --SHTYPVLYWKLHQKYNVSKPTLRHDVAVAKLN 152
+ V LHQ++ K +D+A+ KL+
Sbjct: 113 PTEQEFDVSTLHLHQRFLTDK-GYGYDIALLKLS 145
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 36.7 bits (81), Expect = 0.022
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 34/223 (15%)
Query: 85 CFASVILVKWIVTSAHCVKRD----TKHRLLLFHD----------YTKNYS-HTYPVLYW 129
C S++ +WIVT+AHCV +++ + F D Y + S P+
Sbjct: 1809 CGGSIVNSQWIVTAAHCVTTKPPGASRYTMYAFSDLNVTLGEHQLYQLDGSEQNIPIEGI 1868
Query: 130 KLHQKYNVSKPTLRHDVAVAKLNVDFYPFSTKASVFDRNPPETDVL--TAVLWKTVAAID 187
+H YN L +D+A+ KL P + A V P+ +L T I
Sbjct: 1869 VVHPSYN----DLDYDIALLKLR---QPITFNAYVSQVCLPQAALLAGTPCYVSGWGRIG 1921
Query: 188 KKMYLTNDFDKIEVQITSYNRCFESYG--VDLDASLICIDL--TEYEECFVHEFGPLYYE 243
+ +N + + + C E Y + A + C + T C GPL E
Sbjct: 1922 ESSPGSNVLQEASIPLVDQRACEEQYRNLKPITARMRCAGIYGTPKGTCKGDSGGPLVCE 1981
Query: 244 DK----IVGVLAVKPRDC-DTKYA-IFTNVSFYRDWILKSTGT 280
K ++GV + C D+ YA ++ +V +++DWI ++ +
Sbjct: 1982 SKGRWVLMGVTSWSYNGCADSGYAGVYADVVYFKDWIRQTVSS 2024
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 35.9 bits (79), Expect = 0.038
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 82 SFSCFASVILVKWIVTSAHCVKRDTK--HRLLLFHDYTKNYSH-TYPVLYWK---LHQKY 135
+F C S++ W+VT+AHCV R + ++ ++ +N + T L K H +Y
Sbjct: 499 NFICGGSLVSSTWVVTAAHCVARSSNPAQYQIIVGEHNRNVNEVTEETLNVKKVIAHPQY 558
Query: 136 NVSKPTLRHDVAVAKL 151
N P L +D+A+ +L
Sbjct: 559 N--NPRLSNDIALIEL 572
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 34.7 bits (76), Expect = 0.087
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 186 IDKKMYLTNDFDKIEVQITSYNRCFESYGVDLDA-SLICIDLTEYEE---CFVHEFGPLY 241
+D L + + + I S+ C YG + + + +C + C GPL
Sbjct: 77 VDSSGPLPDILQQARIPIASHEDCKRKYGSGIYSYTHLCAGEAKPNAAGACQGDSGGPLV 136
Query: 242 YEDK----IVGVLAVKPRDCD-TKYAIFTNVSFYRDWILKSTGT 280
E + GV++ +C+ T Y ++T VS Y DWI K G+
Sbjct: 137 CERNGQWTLYGVVSFGAGNCEVTSYTVYTKVSNYLDWITKRAGS 180
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.9 bits (74), Expect = 0.15
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 203 ITSYNRCFESYGVDLDASLICIDLTEYEE---CFVHEFGPLYYEDK----IVGVLAVKPR 255
I S+ C YG + +C + C GPL ED + G ++ R
Sbjct: 585 IASHENCRRKYGDVSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHGAVSYGLR 644
Query: 256 DCDTK-YAIFTNVSFYRDWILKST 278
+C T Y +F V+ Y DWI + T
Sbjct: 645 NCPTTHYTVFARVASYTDWIKRMT 668
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 84 SCFASVILVKWIVTSAHCVKRD 105
+C S+I +W+VT+AHC+ R+
Sbjct: 131 TCGGSLISDRWVVTAAHCIHRN 152
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 238 GPLYYEDK----IVGVLAVKPRDCDTK-YAIFTNVSFYRDWILKST 278
GPL ED + G ++ R+C T Y +F V+ Y DWI + T
Sbjct: 289 GPLVCEDNGSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWIKRMT 334
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 85 CFASVILVKWIVTSAHCVKRDTKHRLLLFHDYTKNYSHTYPVLYWKLHQKYNVSKPTLRH 144
C S+I +W++T+AHCV+ D H H + + KL + + S L++
Sbjct: 106 CGGSLITPEWVLTAAHCVE-DFPHPSA--HRIKERSAIQQEFRLTKLFKHKDFSMSHLKN 162
Query: 145 DVAVAKLNVDFYP 157
DVA+ KL+ P
Sbjct: 163 DVALLKLDNPIQP 175
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 85 CFASVILVKWIVTSAHCVKRDTKHRLLL-----FHDYTKNYSHTYPVLYWKLHQKYNVSK 139
C S+I +WI+T+ HCV+R +++ T Y V H Y+ K
Sbjct: 37 CGGSLIAPQWILTATHCVERKQASSIVIRLGARRRVATVGTEKDYIVTKVITHPSYHKPK 96
Query: 140 PTLRHDVAVAKLN 152
T HD+A+ KL+
Sbjct: 97 -TYSHDIALLKLD 108
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 32.7 bits (71), Expect = 0.35
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 85 CFASVILVKWIVTSAHC--VKRDTKHRLLLF--HDY--TKNYSHTYPVLYWKLHQKYNVS 138
C SV+ +WIVT+AHC +D K + HD T Y V LH KY
Sbjct: 135 CGGSVVAPEWIVTAAHCFAYSKDAKDYTIAVGEHDLNATDGYEQRPDVERIILHPKY--- 191
Query: 139 KPTLRHDVAVAKLNV 153
P HD VA + +
Sbjct: 192 APHNNHDYDVALIKL 206
>SB_29461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 31.9 bits (69), Expect = 0.61
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 173 DVLTAVL-WKTVAAIDKKMYLTNDFDKI---EVQITSYNRCFESYGVDLDASLICIDLTE 228
DVL ++ W V D + Y F ++ +V + RCF Y D+ S+
Sbjct: 43 DVLGSMFYWVRVFLPDVRWYFYQMFYRVFLPDVLSGIFTRCFIGYLPDVLGSMFPFYRVF 102
Query: 229 YEECFVHEFGPLYYEDKIVGVLAV 252
+ CF+ F P++Y + VL+V
Sbjct: 103 FTRCFIGYFYPVFYRVFLPDVLSV 126
>SB_37495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 31.9 bits (69), Expect = 0.61
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 173 DVLTAVL-WKTVAAIDKKMYLTNDFDKI---EVQITSYNRCFESYGVDLDASLICIDLTE 228
DVL ++ W V D + Y F ++ +V + RCF Y D+ S+
Sbjct: 43 DVLGSMFYWVRVFLPDVRWYFYQMFYRVFLPDVLSGIFTRCFIGYLPDVLGSMFPFYRVF 102
Query: 229 YEECFVHEFGPLYYEDKIVGVLAV 252
+ CF+ F P++Y + VL+V
Sbjct: 103 FTRCFIGYFYPVFYRVFLPDVLSV 126
>SB_32915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 31.9 bits (69), Expect = 0.61
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 173 DVLTAVL-WKTVAAIDKKMYLTNDFDKI---EVQITSYNRCFESYGVDLDASLICIDLTE 228
DVL ++ W V D + Y F ++ +V + RCF Y D+ S+
Sbjct: 47 DVLGSMFYWVRVFLPDVRWYFYQMFYRVFLPDVLSGIFTRCFIGYLPDVLGSMFPFYRVF 106
Query: 229 YEECFVHEFGPLYYEDKIVGVLAV 252
+ CF+ F P++Y + VL+V
Sbjct: 107 FTRCFIGYFYPVFYRVFLPDVLSV 130
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 31.5 bits (68), Expect = 0.81
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 82 SFSCFASVILVKWIVTSAHCVKRDTKHR----LLLFHDYTKNYSHTYPVLYWKLHQKYNV 137
S C S++ W++T+AHCV R ++ H + + ++K H+KY V
Sbjct: 53 SHICGGSLLSPLWLLTAAHCVIRSNNSADYTVIVGAHKRVLDGTEHKLSTFYK-HEKY-V 110
Query: 138 SKPTLRHDVAVAKLNVDFYPFSTKAS 163
+HD+A+ KL FSTK S
Sbjct: 111 GGKDKKHDLALIKL-AKPATFSTKVS 135
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 31.5 bits (68), Expect = 0.81
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 203 ITSYNRCFESYGVDLDASLICIDLTEYEE---CFVHEFGPLYYEDK----IVGVLAVKPR 255
I S+ C YG + +C + C GPL ED + G ++ +
Sbjct: 915 IASHENCRRKYGDVSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHGAVSYGMK 974
Query: 256 DCDTK-YAIFTNVSFYRDWILKST 278
C T Y +F V+ Y DWI + T
Sbjct: 975 YCPTTHYTVFARVASYTDWIKRMT 998
Score = 28.7 bits (61), Expect = 5.7
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 10/111 (9%)
Query: 174 VLTAVLWKTVAAIDKKMYLTNDFDKIE---VQITSYNRCFESYGVDLDASLICID--LTE 228
V TA L A+ K Y+T ++ + I ++ C + Y VD A + +
Sbjct: 611 VNTACLPTGEIAVGSKCYITGTQGTLQQAMLPIAEHSLCRKQYRVDRTAHPCAGEARVGA 670
Query: 229 YEECFVHEFGPLYYEDKIVGVL--AVK--PRDCDTKY-AIFTNVSFYRDWI 274
C GPL E V VL AV R C T Y +FT VS Y WI
Sbjct: 671 AGGCNGDSGGPLVCEQSGVWVLHGAVSYGARWCPTDYYTVFTRVSSYVAWI 721
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 85 CFASVILVKWIVTSAHCVKRDTKHR 109
C S+I +W+VT+AHC+ R+ R
Sbjct: 460 CGGSLINREWVVTAAHCIDRNNPSR 484
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 83 FSCFASVILVKWIVTSAHCVKRD--TKHRLLL---FHDYTKNYSHTYPVLYWKLHQKYNV 137
F C S+I +W++T+ HC+ + K+R++L D T+ + V H Y+
Sbjct: 86 FVCGGSLIAPQWVLTAGHCILTEDPEKYRVVLGDVDRDTTEGSEQIFHVRRIIKHPHYSR 145
Query: 138 SKPTLRHDVAVAKLN 152
P +DVA+ +L+
Sbjct: 146 DVP-YDNDVALLQLS 159
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 30.7 bits (66), Expect = 1.4
Identities = 46/212 (21%), Positives = 84/212 (39%), Gaps = 23/212 (10%)
Query: 85 CFASVILVKWIVTSAHCVKR--DTKHRLLLFHDYTKNYSHT-YPVLYWKLHQKYNVSKPT 141
C S++ W++T+AHCV R +T ++ + + T + + + H+KY V
Sbjct: 340 CGGSLLSSTWVLTAAHCVIRSHNTSDYTVIVGAHKRVLDGTEHKLSAFYKHEKY-VGGKD 398
Query: 142 LRHDVAVAKLNVDFYPFSTKASVFDRNPPETDVL------TAVLWKTVAAIDKKMYLTND 195
+HD+A+ +L FS K S P + D+L W V+ ++
Sbjct: 399 KKHDLALIRL-AKPAAFSAKVSPVCL-PKQGDLLGNEKNCYTTGWGRVSG-SMMFFMATK 455
Query: 196 FDKIEVQITSYNRC---FESYGVDLDASLICIDLTEYEECFVHEFGPLYYEDKIVGVL-- 250
+ + + C + + D ++IC + C GPL + VL
Sbjct: 456 LQQARTPVVDHETCAIKLDKFAAD-KTTMICAGGSGSSACSGDSGGPLVCHEGGTWVLRG 514
Query: 251 AVK---PRDCDTK-YAIFTNVSFYRDWILKST 278
AV C + + + +S + DWI + T
Sbjct: 515 AVSWGTSHSCPGRMFVAYARISSHIDWIERIT 546
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 82 SFSCFASVILVKWIVTSAHCVKRDTK---HRLLLFHDYTKNYSHTYPVLYWKLHQKYNVS 138
S +C AS++ W +T+AHCV+R + + L N +H + ++ S
Sbjct: 108 SHNCGASLLSPGWALTAAHCVQRSSNPADYTLAAGAHRRVNDAHAQVLRVSQVISHKEFS 167
Query: 139 KPTLRHDVAVAKLN 152
LR+DV + +L+
Sbjct: 168 MGHLRNDVTLLRLS 181
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 85 CFASVILVKWIVTSAHCVKRD 105
C S+I W+VT+AHCV R+
Sbjct: 57 CGGSLIAKDWVVTAAHCVDRN 77
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 84 SCFASVILVKWIVTSAHCV 102
SC ++I KW++T+AHCV
Sbjct: 501 SCGGALISSKWVITAAHCV 519
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 82 SFSCFASVILVKWIVTSAHCVKRDTK 107
SF C ++I W+VT+AHC D K
Sbjct: 746 SFRCGGALIARDWVVTAAHCFYYDGK 771
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 73 VVANTSGIWSFSCFASVILVKWIVTSAHCV 102
V N +G W C S+I W+VT+ HCV
Sbjct: 1 VTVNNTGHW---CGGSIIDPHWVVTAGHCV 27
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 67 FPYVGAVVANTSGIWSFSCFASVILVKWIVTSAHC 101
+P+ ++ T + + C S+I WI+TS+HC
Sbjct: 257 WPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHC 291
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/32 (34%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 83 FSCFASVILVKWIVTSAHCVKRD--TKHRLLL 112
F C S++ W++T+AHC+ D +K++++L
Sbjct: 56 FICGGSLVAPGWVLTAAHCILSDDASKYKVVL 87
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 63 NAER--FPYVGAVVANTSGIWSFSCFASVILVKWIVTSAHCV--KRDTKHRLLLFHDYTK 118
NAE +P+ ++ N+S + C +VI W++T+AHCV +R + +L +
Sbjct: 551 NAEHGEWPWQVSMKLNSSSL-PHICGGNVISPWWVLTAAHCVQDERASNIKLTMGEWRLF 609
Query: 119 NYSHTYPVL-YWKLHQKYNVSKPTLRHDVAVAKL 151
N T V+ ++ N S T+ +D A+ KL
Sbjct: 610 NVDGTEQVIPVERIISHANYSYNTVDYDYALLKL 643
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 84 SCFASVILVKWIVTSAHCV 102
+C S+I KW++T+AHCV
Sbjct: 132 ACGGSLISEKWVLTAAHCV 150
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 12/94 (12%)
Query: 65 ERFPYVGAVVANTSGIWSFSCFASVILVKWIVTSAHCVKRD-TKHRLLLFHDYTKNYSHT 123
E+ P++ A++ +++ +C S++ WIVT+AHC + + R++ +D +T
Sbjct: 50 EQHPWMVAMMLDSAQ----ACGGSLVPEDWIVTAAHCFDSNRLRWRVVAGNDMPSKAVNT 105
Query: 124 YPV-LYWKLHQKYNVSKPTLR-----HDVAVAKL 151
V W+ H +Y + +L +DVA+ KL
Sbjct: 106 TGVSAIWR-HPQYKSNIASLESGPCDYDVALVKL 138
>SB_30609| Best HMM Match : Filamin (HMM E-Value=0.032)
Length = 244
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 107 KHRLLLFHDYTKNYSHTYPVLYWKLHQKYNVSKPTLRHDVAVAKLNVDFY--PFSTKASV 164
K+RL ++ DYT T P W + S + + + +LN FY PF+ +V
Sbjct: 144 KYRLAIYLDYTLCQGLTDPPFNWFI---IGNSHGKFQEEGVIGRLNRFFYHEPFNLTITV 200
Query: 165 FDRNPPETDV 174
+R PE +
Sbjct: 201 PERRLPEVSI 210
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 85 CFASVILVKWIVTSAHCVKR 104
C SVI +W+VT+AHC +
Sbjct: 53 CGGSVIKSQWVVTAAHCFSK 72
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 63 NAERFPYVGAVVANTSGIWSFSCFASVILVKWIVTSAHCV 102
NA + + + T+G C S+I +W++T+AHCV
Sbjct: 43 NAPQHAWPWQISLRTNG--QHICGGSLITPEWVLTAAHCV 80
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 85 CFASVILVKWIVTSAHCVK 103
C S+I +WI+T+ HC K
Sbjct: 79 CAGSLIEARWIITAGHCFK 97
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 82 SFSCFASVILVKWIVTSAHCV 102
+F C ++I W++T+AHCV
Sbjct: 1189 TFHCGGTLIAEDWVLTAAHCV 1209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.136 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,364,745
Number of Sequences: 59808
Number of extensions: 377006
Number of successful extensions: 780
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 745
Number of HSP's gapped (non-prelim): 43
length of query: 284
length of database: 16,821,457
effective HSP length: 81
effective length of query: 203
effective length of database: 11,977,009
effective search space: 2431332827
effective search space used: 2431332827
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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