Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001368-TA|BGIBMGA001368-PA|IPR001220|Legume lectin, beta
domain
(482 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 31 2.7
12_01_1031 - 10605581-10606088,10606360-10606420,10606448-106064... 30 3.6
01_05_0749 + 24890944-24891146,24891414-24891535,24891633-248917... 30 4.7
12_01_0500 + 3966456-3968556,3968640-3969087,3969524-3969718,396... 29 6.2
08_02_1082 + 24225592-24226422 29 6.2
06_01_0462 - 3285667-3288123 29 6.2
03_05_0136 + 21158917-21159939,21160183-21160241,21160259-211602... 29 6.2
08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947 29 8.2
06_01_1159 - 9852316-9852441,9852743-9852838,9852912-9852977,985... 29 8.2
03_02_0039 - 5213699-5214775,5214815-5215093,5215300-5215776,521... 29 8.2
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 30.7 bits (66), Expect = 2.7
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 206 SKAVTTSKADTTSKADTISEAATTIKSETVSKTNTTSTLEVATKSNKTSEITTVSSGGNS 265
S AV T D T S + + +S + T + SN TS++T + GN+
Sbjct: 241 STAVKTDAKDVVVATSTDSAGSVSDVKADLSNRSDTPPASGSGHSNHTSDVTVSPAKGNA 300
Query: 266 SAIGKETN 273
G +TN
Sbjct: 301 KDGGADTN 308
>12_01_1031 - 10605581-10606088,10606360-10606420,10606448-10606491,
10606664-10608382,10609848-10610791
Length = 1091
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 46 RTLNPREVRDVKDALKQIFSKRNIDPEQIKEINNYYDIETTVTVEF 91
R + P K+ +F K N+D ++++ + ++YDIE V F
Sbjct: 1012 RYIAPAFTEYAKEFAGAVFIKVNVDSDELESVTDWYDIEGIVPTFF 1057
>01_05_0749 +
24890944-24891146,24891414-24891535,24891633-24891721,
24891813-24891848,24892268-24892367,24892524-24892566,
24892645-24892739,24892978-24893036,24893114-24893613,
24893691-24893772,24893864-24894429,24894520-24894655,
24894750-24894812,24894942-24895172,24895282-24895395
Length = 812
Score = 29.9 bits (64), Expect = 4.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 42 DNDLRTLNPREVRDVKDALKQIFSKRNIDPEQIKEINNYY 81
+ LR LN ++R KD + F+ + QIKE N Y
Sbjct: 758 ETTLRPLNMEDLRKAKDEVAASFASEGVVMNQIKEWNELY 797
>12_01_0500 +
3966456-3968556,3968640-3969087,3969524-3969718,
3969891-3970119
Length = 990
Score = 29.5 bits (63), Expect = 6.2
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 211 TSKADTTSKADTISEAATTIKSETVSKTNTTSTLEVATKSNKT-SEITTVSSGGNSSA 267
T+ DT + A + ++ + + ++ + T TT+TL SN T S+ T + NS+A
Sbjct: 325 TTDDDTATGASSNNQTISDMNDDSNTTTTTTTTLAAVDSSNGTVSQTTEDDAPANSAA 382
>08_02_1082 + 24225592-24226422
Length = 276
Score = 29.5 bits (63), Expect = 6.2
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 204 TASKAVTTSKADTTSKADTISEAATTIKSETVSKTNTTSTLEVATKSNKTSEITT 258
T T+ T + AD+ ++ T SE + T+TT+T A + TSEITT
Sbjct: 146 TPEPLAATTPVLTEAAADSAAKTTTEATSEKKTTTSTTTTTPPAPDT--TSEITT 198
>06_01_0462 - 3285667-3288123
Length = 818
Score = 29.5 bits (63), Expect = 6.2
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 293 STLPKFDIEALLD-IVSNLTFDYDTNLTLV-LNETLQKYSI 331
S L KF+ L D ++ LT DYD NL L LNET +S+
Sbjct: 249 SDLFKFEASDLGDHVMRRLTLDYDGNLRLYSLNETSGNWSV 289
>03_05_0136 +
21158917-21159939,21160183-21160241,21160259-21160294,
21160345-21160387,21160582-21160698,21162090-21162179,
21162329-21162436,21162547-21162588
Length = 505
Score = 29.5 bits (63), Expect = 6.2
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Query: 205 ASKAVTTSKADTTSKADTISEAATTIKSETVSKTNTTSTL-EVATKSNKTSEITTVSSGG 263
A+ ++S + T+ AD ++E + +S+ + + L A + ++ SGG
Sbjct: 84 AASTPSSSSSVATTLADHLAEDSLDAPPAALSRQRSCTELPRFADADAEARKVVVARSGG 143
Query: 264 NSSAIGKETNIXXXXXXXXXXXXFRRTRKSTLPKFDIEALLDIVSN 309
++SAIG+ + R S L + D A D+ S+
Sbjct: 144 HASAIGRSMRLLPSTRPAGVTLTPGRVAPSDLRRLDAGA--DVASS 187
>08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947
Length = 660
Score = 29.1 bits (62), Expect = 8.2
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 205 ASKAVTTSKADTTSKADTISEAATTIKSETVSKTNTTSTLEVATKSNKTSEITTVSSGGN 264
A+ A TT+ A T+K D + T KS ++ T+ L + K S+ GG+
Sbjct: 485 AAAAATTATAAATAK-DKKARGMRTNKSRGPARNQKTAKLSETGEGTKKSDKKGGGGGGS 543
Query: 265 SSA 267
SSA
Sbjct: 544 SSA 546
>06_01_1159 -
9852316-9852441,9852743-9852838,9852912-9852977,
9853091-9853180,9853262-9853373,9853515-9853598,
9853864-9853940,9854823-9854873,9854924-9855031,
9855703-9855774,9856952-9857011,9857808-9857876,
9858005-9858088,9858212-9858295,9859106-9859198,
9859930-9860030,9861155-9861264,9863058-9863104,
9863693-9863778,9863940-9864012,9864454-9864540,
9864650-9865301,9866164-9867182,9867702-9867797
Length = 1180
Score = 29.1 bits (62), Expect = 8.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 204 TASKAVTTSKADTTSKADTISEAATTIKSETVSKTNTTSTLEVATKSNK 252
T +K TT + TS+ SE K+ T + + T ATKS K
Sbjct: 176 TGTKKTTTRRKSPTSRKKEASEDMKEEKASTKKQRKSVKTSTAATKSRK 224
>03_02_0039 -
5213699-5214775,5214815-5215093,5215300-5215776,
5216073-5216438
Length = 732
Score = 29.1 bits (62), Expect = 8.2
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 205 ASKAVTTSKADTTSKADTISEAATTIKSETVSKTN---TTSTLEVATKSNKTSEITTVSS 261
A VTT+ + TT++ + I T K TT+T VAT ++ T+ T SS
Sbjct: 184 AVSGVTTATSTTTTRTAALQIVLMRITEATARKRGTGATTATKGVATDADSTTTTTPSSS 243
Query: 262 GGNSSAI 268
+ +
Sbjct: 244 AATAGGV 250
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.130 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,318,019
Number of Sequences: 37544
Number of extensions: 373627
Number of successful extensions: 1031
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1015
Number of HSP's gapped (non-prelim): 18
length of query: 482
length of database: 14,793,348
effective HSP length: 85
effective length of query: 397
effective length of database: 11,602,108
effective search space: 4606036876
effective search space used: 4606036876
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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