GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001368-TA|BGIBMGA001368-PA|IPR001220|Legume lectin, beta
domain
         (482 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.22 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.5 bits (58), Expect = 0.22
 Identities = 17/56 (30%), Positives = 23/56 (41%)

Query: 203  DTASKAVTTSKADTTSKADTISEAATTIKSETVSKTNTTSTLEVATKSNKTSEITT 258
            DT + +      D T+K  T   + TT    T + T  T+T    T S  T   TT
Sbjct: 1022 DTGASSTEHMHPDWTTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTT 1077



 Score = 25.0 bits (52), Expect = 1.2
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 211  TSKADTTSKADTISE--AATTIKSETVSKTNTTSTLEVATKSNKTSEITTV 259
            T+K  T   + T S     TT +  T ++  TTST    T +N  ++ TT+
Sbjct: 1036 TTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTI 1086


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 351 DRKYSPVVAKCFVC 364
           ++KY P +AKC+ C
Sbjct: 36  NQKYYPSLAKCYAC 49


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.130    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,311
Number of Sequences: 317
Number of extensions: 3252
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 3
length of query: 482
length of database: 114,650
effective HSP length: 59
effective length of query: 423
effective length of database: 95,947
effective search space: 40585581
effective search space used: 40585581
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)