Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001367-TA|BGIBMGA001367-PA|IPR001395|Aldo/keto reductase
         (331 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.5  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   9.5  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 88  IKKKIAEGVVKREDLFVTT-KLWNTNHKKEAVLPALRKSLKNLDLDY 133
           ++ KI E +    DL V   ++    H   A L A+  SLKNL+ D+
Sbjct: 181 VRSKIIEYMNHLVDLGVAGFRVDAAKHMWPADLEAIYASLKNLNTDH 227


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 198 VLQVEINLNLQQPALLDY-CKAQGIVVVAYTPFGNLFNRQPSAPAPRADDQRL 249
           ++QV  +L  Q   LL+Y  K +G  VV Y      + +      P   DQRL
Sbjct: 614 IIQVANSLR-QYEDLLEYEAKEEGPKVVCYMTNWAFYRKAEGKFVPEHIDQRL 665


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 100 EDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVDLYLIH 140
           ED F   +LW  +  K+ +L +   ++K      V   + H
Sbjct: 125 EDTFYDIRLWGVSFSKKQILRSDDLAVKTTSKSLVPTPVTH 165


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)

Query: 308 DNGYRTLSP-LFWAHSPYFPFESKN 331
           D  + +L P L W H  YF F S N
Sbjct: 66  DGIHTSLYPVLVWIHGGYFIFGSGN 90


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.136    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,150
Number of Sequences: 317
Number of extensions: 3378
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 5
length of query: 331
length of database: 114,650
effective HSP length: 57
effective length of query: 274
effective length of database: 96,581
effective search space: 26463194
effective search space used: 26463194
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)