BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001367-TA|BGIBMGA001367-PA|IPR001395|Aldo/keto reductase
(331 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 220 1e-57
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 182 3e-46
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 151 1e-36
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 117 2e-26
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 1e-25
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 67 2e-11
SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 6e-06
SB_5128| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 38 0.011
SB_53822| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_51365| Best HMM Match : ig (HMM E-Value=0.00037) 30 2.3
SB_49241| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_58629| Best HMM Match : Homeobox (HMM E-Value=0.05) 29 7.0
SB_40519| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_21610| Best HMM Match : HSF_DNA-bind (HMM E-Value=0.32) 29 7.0
SB_20867| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_34777| Best HMM Match : VWA (HMM E-Value=0) 28 9.2
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 220 bits (538), Expect = 1e-57
Identities = 114/302 (37%), Positives = 182/302 (60%), Gaps = 19/302 (6%)
Query: 28 LKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTEDQVGRA 87
+KLNNG E+P G+GTW + K +V+ +V++AI GYRHID A Y E +VG A
Sbjct: 4 VKLNNGLEMPVLGLGTW------KSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDA 57
Query: 88 IKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVDLYLIHWPIALHD 147
+++ + VV+R+DLF+T+KLWNT H + V SLK+L LDY+DLYLIHWP++ D
Sbjct: 58 LRELLGS-VVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLSFRD 116
Query: 148 -----------NASISQTDYVETWQAMTDVLNQGLTKSIGVSNFNIQQLERLKSEGGVTP 196
N + D +TW+AM ++++GL K+IG+SNFN +Q++ + + + P
Sbjct: 117 GDEFFPKDEQGNVLYAYHDPCDTWKAMEKLVDEGLVKAIGLSNFNSKQVDDICAIARIKP 176
Query: 197 SVLQVEINLNLQQPALLDYCKAQGIVVVAYTPFGNLFNRQPSAPAPRA-DDQRLVAIAQK 255
QVE + L Q L+D+ K I +AY+P G+L P D +VA+A +
Sbjct: 177 VANQVECHPLLNQAKLIDHHKKHNIQTIAYSPLGSLDRPWAKPDDPHVMRDPTMVAMADR 236
Query: 256 YKKTVPQIVLRYLVELGVIPIPKSLHKDRVEENIQIYDFSLTPDEIQLLKSFDNGYRTLS 315
Y +TV QI +R+ ++ GV+ IPKS+ +R++ N Q++DF L+ +++ ++ + +R
Sbjct: 237 YSRTVAQICIRFQIQRGVLVIPKSVTPERIKSNFQVFDFELSAEDMATIEGLNRDWRACL 296
Query: 316 PL 317
P+
Sbjct: 297 PM 298
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 182 bits (444), Expect = 3e-46
Identities = 103/284 (36%), Positives = 166/284 (58%), Gaps = 31/284 (10%)
Query: 30 LNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTEDQVGRAIK 89
+N+G++IP G+G ++++ +++V WA+++GYR IDTA+ Y E VG A++
Sbjct: 70 MNDGRKIPLLGLG------AHDIHS---KQAVLWALESGYRLIDTASRYHNEQSVGEAVR 120
Query: 90 KKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVDLYLIHWPIALHDNA 149
+ R +++V TK++ T H + + A KSL L L YVDLYLIH+P+
Sbjct: 121 CSN----IPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFPVP----- 171
Query: 150 SISQTDYVETWQAMTDVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQ 209
+ V +WQAM D+ ++GL +SIGVSNFNIQ LE L+ + GV P+V Q+E++ LQ
Sbjct: 172 ----SGVVGSWQAMIDLRSRGLIRSIGVSNFNIQHLEALRQQTGVVPAVNQIEVHPFLQM 227
Query: 210 PALLDYCKAQGIVVVAYTPFGNLFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLV 269
L YCK I + A++P + D L +A+KY KT QI++R+ +
Sbjct: 228 KELTQYCKRHNITIQAFSPL---------TKGEKLCDPILSYVAKKYNKTTAQILVRWSL 278
Query: 270 ELGVIPIPKSLHKDRVEENIQIYDFSLTPDEIQLLKSFDNGYRT 313
+ G IPKS +R++EN +++DFS+ +++L+ + YRT
Sbjct: 279 QKGYACIPKSAQLERIKENAKVFDFSIDMADMELIDGLEENYRT 322
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 151 bits (365), Expect = 1e-36
Identities = 78/177 (44%), Positives = 113/177 (63%), Gaps = 11/177 (6%)
Query: 55 DEVQKSVEWAIDAGYRHIDTAAIYSTEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHK 114
+EV +V AI+ GYRHID A IY E ++G A+ + + EG VKRE+LFVT+KLW +H
Sbjct: 65 EEVGNAVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKLWCDSHH 124
Query: 115 KEAVLPALRKSLKNLDLDYVDLYLIHWPIALHDNA----SISQ--TDYV-----ETWQAM 163
+ VLPA + +LKNL LDY+DLYLIH P+A SI++ Y TWQAM
Sbjct: 125 PDDVLPACQATLKNLQLDYLDLYLIHIPVAFKKGVRLPHSIAEGIIGYTPEGVQNTWQAM 184
Query: 164 TDVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQPALLDYCKAQG 220
++ +GL K+IGVSNF++++L +L + P+ QVE++ L Q L ++C ++G
Sbjct: 185 EGLVAKGLCKAIGVSNFSVKRLNKLLETASIVPACNQVELHPYLPQEKLKEFCDSKG 241
Score = 59.3 bits (137), Expect = 4e-09
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 214 DYCKAQGIVVVAYTPFGN---LFNRQPSAPAPRADDQRLVA-IAQKYKKTVPQIVLRYLV 269
D+C ++GI++ AY+P GN L ++ P+ ++ ++ IA K+ +V +++LR+ +
Sbjct: 283 DFCDSKGILLTAYSPLGNPGRLVPKERLEREPKVMEEPVIKEIAAKHNCSVARVLLRWGI 342
Query: 270 ELGVIPIPKSLHKDRVEENIQIYDFSLTPDEIQLLKSFDNGYRTLSP-LFWAHSPYF-PF 327
+ G +PKS +D + +N LT DE+ +KS R L+ +A Y PF
Sbjct: 343 QRGYPVLPKSTSRDHLHDNFSALGLVLTDDEMAAIKSITTRQRYLTQGWMYAEGEYVDPF 402
Query: 328 ESK 330
+ +
Sbjct: 403 DGE 405
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 117 bits (281), Expect = 2e-26
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 13/166 (7%)
Query: 63 WAIDAGYRHIDTAAIYSTEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPAL 122
+A+ GYR +DTA IY E +VG A++K +KRED++VTTKL + L
Sbjct: 52 FALKNGYRMLDTADIYQNEKEVGSAVRKS----GLKREDIYVTTKLKPSEEGHSNALKYA 107
Query: 123 RKSLKNLDLDYVDLYLIHWPIALHDNASISQTDYVETWQAMTDVLNQGLTKSIGVSNFNI 182
++S+K LD+ YVDL+LIH P + + + A+ + +GL +S+GVSNF +
Sbjct: 108 KESIKKLDIGYVDLFLIHTP---------RPGNIIAAYDALLTLKEEGLIRSVGVSNFGV 158
Query: 183 QQLERLKSEGGVTPSVLQVEINLNLQQPALLDYCKAQGIVVVAYTP 228
LE L+ G TP++ Q+EIN +Q ++ YC GI V Y P
Sbjct: 159 HHLEELRKAGCRTPAINQIEINPFWRQEEIIKYCNKHGITVEGYAP 204
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 114 bits (274), Expect = 1e-25
Identities = 82/281 (29%), Positives = 137/281 (48%), Gaps = 17/281 (6%)
Query: 30 LNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYS-TEDQVGRAI 88
L +G +P G GT G++ V+ A++ GYR IDTA Y +E QV +AI
Sbjct: 331 LASGYTMPVMGFGT-------ATLGEDTLSVVKTALETGYRLIDTAQGYPLSEPQVAKAI 383
Query: 89 KKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVDLYLIHWPIALHDN 148
A+ + R+D+F+ TKL E L ++ SL+ L DY+DL+LIH
Sbjct: 384 ----ADSGIPRKDIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIHSKTCDDFL 439
Query: 149 ASISQTD----YVETWQAMTDVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEIN 204
+ ++ + + E+W+AM ++ QG +S+GVSNFN+ +L+ L + V S +Q +
Sbjct: 440 LTCAEGEPRGTWKESWKAMEELHRQGKIRSLGVSNFNVDELQELVNFATVPVSAVQNWFD 499
Query: 205 LNLQQPALLDYCKAQGIVVVAYTPFGNLFNRQPSAPA-PRADDQRLVAIAQKYKKTVPQI 263
Q +C GI + Y+ G + P + I+ Y+ + Q+
Sbjct: 500 PFHQDRKARRFCNKHGIRYIGYSTLGTQWVYFHGLKTNPVLQSKVFSEISSHYEYVISQV 559
Query: 264 VLRYLVELGVIPIPKSLHKDRVEENIQIYDFSLTPDEIQLL 304
VLR+ + V IP+S + + N + D SL +EI+++
Sbjct: 560 VLRWAIHQNVTVIPRSRNSRNIYLNFRSLDLSLNENEIEMI 600
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 66.9 bits (156), Expect = 2e-11
Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 10/100 (10%)
Query: 30 LNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTEDQVGRAIK 89
L++G +IP FG+G + +L +++V WA++ GYR IDTAA Y+ E +VG A++
Sbjct: 3 LSDGYKIPRFGLGLY------DLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEALR 56
Query: 90 KKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNL 129
E V R ++++ TK+++T+H E + A +SL L
Sbjct: 57 ----ESAVPRSEVYLVTKVYHTDHGYEKTMKAYDRSLSAL 92
>SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 48.8 bits (111), Expect = 6e-06
Identities = 35/150 (23%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 115 KEAVLPALRKSLKNLDLDYVDLYLIHWPIALHDNASISQTDYVETWQAMTDVLNQGLTKS 174
++ V +++KS+K + +D +D+ HW S Y++ ++++ ++G +
Sbjct: 3 RKVVEASIQKSMKRMAVDKLDMVQFHW-------WDYSDKRYLDALLHLSELQSEGKIQE 55
Query: 175 IGVSNFNIQQLERLKSEGGVTPSVLQVEINL--NLQQPALLDYCKAQGIVVVAYTPF--G 230
I ++NF+ +++ + ++ G+ S Q++ +L ++ +C GI ++AY G
Sbjct: 56 ISLTNFDTNRMQEI-TDHGIKISSNQIQFSLIDRRANEKMVKFCLDHGISLLAYGTIAGG 114
Query: 231 NLFNRQPSAPAPRADDQRLVAIAQKYKKTV 260
L R P P A DQ A +KYK+ +
Sbjct: 115 FLTKRYLGKPEPTA-DQLNTASLRKYKQMI 143
>SB_5128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2102
Score = 48.0 bits (109), Expect = 1e-05
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 208 QQPALLDYCKAQGIVVVAYTPFGNLFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRY 267
Q A YCK I + Y+ G ++ R+ P ++ L I + TV Q+VL++
Sbjct: 1331 QDKATRQYCKENNIKYMGYSTLGGMYVREGFDKNPVQNNFELQRIGGVFDATVSQVVLKW 1390
Query: 268 LVELGVIPIPKSLHKDRVEENIQIYDFSLTPDEIQLLKSFDNGY 311
+E V+ IP+S + + N + L ++ S D Y
Sbjct: 1391 ALEQDVLVIPQSRTPNHIRTNFHLDHVQLDSKQMAYFDSLDGLY 1434
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 101 DLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVDLYLIHWPIALHDNASISQTDYVETW 160
+L +K+ N + ++ + KSL+ L +D +DLYL+HW + ET
Sbjct: 27 ELGTLSKVRPENASEMKMMLSCEKSLERLGIDRIDLYLLHWE---------GRVPLEETV 77
Query: 161 QAMTDVLNQGLTKSIGVSNFNI 182
A +++++G+ GVSN ++
Sbjct: 78 DAFRELVDEGMIARWGVSNLDL 99
>SB_53822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 258
Score = 31.5 bits (68), Expect = 0.99
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 142 PIALHDNASISQTDYVETWQAMTDVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQV 201
P+AL + T E W+ V++ G + +G + + +L+ L S+ ++ V +
Sbjct: 74 PLALEALDWLRNTVSKEAWKETHLVISGGYDERVGENKQHYLELQALASKYNLSEKVTFI 133
Query: 202 EINLNLQQPALLDYCKAQGIVVVAYTPFGNLFNRQP 237
Q+ ALLD+C + YTP F P
Sbjct: 134 RSFSENQKLALLDFC-----CCLLYTPSNEHFGLVP 164
>SB_51365| Best HMM Match : ig (HMM E-Value=0.00037)
Length = 498
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 114 KKEAVLPALRKSLKNLDLDYVDLYLIHWPIALHDNASISQTDYVETWQAMTDVLNQGLTK 173
K + VL + SLK + D VD++ +H P D+ +T E+ +A+ + +G K
Sbjct: 335 KFDRVLEQMNTSLKRMKRDKVDIFYLHAP----DH----KTPIEESLKAVDQLHKEGKFK 386
Query: 174 SIGVSNF 180
G+SN+
Sbjct: 387 EFGLSNY 393
>SB_49241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 80 TEDQVGRAIKKKI--AEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVDLY 137
+E++V RA K+++ A +RE L N N + +++ LK ++L+ V++
Sbjct: 74 SEEKVSRAQKRRVKKASKENEREQRIAAADLENVNSARNVEAMKIKQRLKEINLEIVEIK 133
Query: 138 LIHWPIALHDNASISQTDYV 157
++ D S D++
Sbjct: 134 MLSLRQQTADYMSSHSEDFL 153
>SB_58629| Best HMM Match : Homeobox (HMM E-Value=0.05)
Length = 466
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 107 KLWNTNHKKEAVLPALRKSLKNLDLDYVDL 136
+L+ N K +P LRK+ + LDLD D+
Sbjct: 410 QLYAKNRLKSLAIPMLRKAFETLDLDISDI 439
>SB_40519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 28.7 bits (61), Expect = 7.0
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 141 WPIALHDNASISQTDYVETWQAMTDVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQ 200
WP L D+ S T Y D N T +S ++ E + S +
Sbjct: 655 WPPRLRDHLSTFATVYTLGTTFRLD--NNKTTLRTELSEKTMENEEDSDFNLKIEESRFE 712
Query: 201 VEINLNLQQPALLDYCKAQGI 221
+ LNL + +LLDY +++GI
Sbjct: 713 IVKRLNLDRTSLLDYLRSKGI 733
>SB_21610| Best HMM Match : HSF_DNA-bind (HMM E-Value=0.32)
Length = 425
Score = 28.7 bits (61), Expect = 7.0
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 45 LGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTEDQVG-RAIKKKIAEGVVKREDLF 103
L T S E KG E + + A R + A S + G A K I GV KR
Sbjct: 54 LETKSEECKGLESRVDQYKVLLA--RAENRLAQLSLQSGKGPHAAKGIITPGVNKR---- 107
Query: 104 VTTKLWNTNHK-KEAVLPALRKSLKNLDLDYVDLYLIHWPIALHDNASISQTDYVETWQA 162
V L N K K A+ L++ K++DL +L L + +AL D+ + T+ E A
Sbjct: 108 VVEGLTRQNTKLKIALSNLLKRGPKSVDLAEENLDLTNMVVALKDDLEKAFTENKELRDA 167
Query: 163 MTDVLNQGLTK-SIGVSNFNIQQLERLKSEGGV 194
+ V N K V+N + +QL ++ G+
Sbjct: 168 LLAVENDDTQKLQQQVANLSAKQLSTERTLRGL 200
>SB_20867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 1 MVVYKYSFVFVFAAVIHLSPSAGLAPVLKLNNGKEIPGFGIGTWLG 46
+++YK + F FAA+ L P G L L + ++P + +G LG
Sbjct: 56 LLIYKVFYFFYFAAIGSLQPYFG----LYLKHSVQLPAYLVGIILG 97
>SB_34777| Best HMM Match : VWA (HMM E-Value=0)
Length = 1268
Score = 28.3 bits (60), Expect = 9.2
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Query: 47 TNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTEDQV---GRAIKKKIAEGVVKREDLF 103
T++N+ K DE +V D + + S +V G+ K A+G K +
Sbjct: 285 TDTNQKKQDEESPTVTVTSDGEHTTVKVLDAQSPTPKVTINGKTNDGKSADGNTKSQQ-- 342
Query: 104 VTTKLWNTNHKKEAVLPALRKSLKNLD 130
NT H +V P+L LKNLD
Sbjct: 343 ------NTTHDITSVDPSLSNKLKNLD 363
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.136 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,070,124
Number of Sequences: 59808
Number of extensions: 463282
Number of successful extensions: 969
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 941
Number of HSP's gapped (non-prelim): 19
length of query: 331
length of database: 16,821,457
effective HSP length: 82
effective length of query: 249
effective length of database: 11,917,201
effective search space: 2967383049
effective search space used: 2967383049
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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