Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001366-TA|BGIBMGA001366-PA|undefined
         (242 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.53 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.53 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   2.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.8  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    22   4.9  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    22   4.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.6  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 29  VLALSCARSREEVIEARKIWEKIA 52
           +L L C R R EV++   + +KIA
Sbjct: 305 ILILQCGRVRSEVVKILNVLKKIA 328


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 29  VLALSCARSREEVIEARKIWEKIA 52
           +L L C R R EV++   + +KIA
Sbjct: 231 ILILQCGRVRSEVVKILNVLKKIA 254


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 17  LEILVKYMEKYPVLALSCAR 36
           L +LV YM+K   L  +C R
Sbjct: 171 LHLLVDYMKKNKTLGAACGR 190


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 17  LEILVKYMEKYPVLALSCAR 36
           L +LV YM+K   L  +C R
Sbjct: 485 LHLLVDYMKKNKTLGAACGR 504


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 17  LEILVKYMEKYPVLALSCAR 36
           L +LV YM+K   L  +C R
Sbjct: 718 LHLLVDYMKKNKTLGAACGR 737


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 17  LEILVKYMEKYPVLALSCAR 36
           L +LV YM+K   L  +C R
Sbjct: 718 LHLLVDYMKKNKTLGAACGR 737


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 166 IIHIEYADIKPNLSQDPIELDHDRKSLEELRR 197
           IIHI      P++  DP + D DR   E +++
Sbjct: 88  IIHIYDLHHNPDIYPDPEKFDPDRFLPENVQK 119


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 159 LANNNEEIIHIEYADIKPNLSQDPIELDHDRKSLEELRR 197
           L   +  IIHI       ++  DP +LD DR   E +++
Sbjct: 81  LPKESNAIIHIYDVHRNADIYPDPEKLDPDRFLPENVQK 119


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/15 (40%), Positives = 12/15 (80%)

Query: 18  EILVKYMEKYPVLAL 32
           ++L+K++E YP+  L
Sbjct: 149 QLLIKFVEVYPLFVL 163


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.134    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,346
Number of Sequences: 317
Number of extensions: 1862
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 9
length of query: 242
length of database: 114,650
effective HSP length: 55
effective length of query: 187
effective length of database: 97,215
effective search space: 18179205
effective search space used: 18179205
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)