SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001366-TA|BGIBMGA001366-PA|undefined
         (242 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041118-1|AAH41118.1|  345|Homo sapiens KIAA1826 protein.             38   0.032
AL834523-1|CAD39179.1|  345|Homo sapiens hypothetical protein pr...    38   0.032
AB058729-1|BAB47455.1|  380|Homo sapiens KIAA1826 protein protein.     38   0.032
BC044311-1|AAH44311.2|  399|Homo sapiens hypothetical protein LO...    35   0.30 
D86964-1|BAA13200.1| 1842|Homo sapiens KIAA0209 protein.               33   1.2  
BC113457-1|AAI13458.1| 1830|Homo sapiens dedicator of cytokinesi...    33   1.2  
BC104900-1|AAI04901.1| 1830|Homo sapiens dedicator of cytokinesi...    33   1.2  
BC126343-1|AAI26344.1|  514|Homo sapiens t-SNARE domain containi...    31   2.8  
BC113556-1|AAI13557.1|  513|Homo sapiens t-SNARE domain containi...    31   2.8  
BC033617-1|AAH33617.1|  519|Homo sapiens t-complex 11 (mouse)-li...    31   2.8  
AK055726-1|BAB70997.1|  513|Homo sapiens protein ( Homo sapiens ...    31   2.8  
X95712-1|CAA65016.1| 1442|Homo sapiens FMI protein protein.            31   3.6  
BC041696-1|AAH41696.1|  509|Homo sapiens t-complex 11 (mouse)-li...    30   8.4  
AL121926-3|CAC48254.1|  509|Homo sapiens dJ85M6.3 (similar to te...    30   8.4  
AK002198-1|BAA92131.1|  509|Homo sapiens protein ( Homo sapiens ...    30   8.4  

>BC041118-1|AAH41118.1|  345|Homo sapiens KIAA1826 protein.
          Length = 345

 Score = 37.9 bits (84), Expect = 0.032
 Identities = 21/71 (29%), Positives = 36/71 (50%)

Query: 13 SRKHLEILVKYMEKYPVLALSCARSREEVIEARKIWEKIAQSLNKVDEKVYKTGCKWSRY 72
          S +  + L+K + K   +  S   +    +  R  WE+IAQ +N V E   +TG +  R 
Sbjct: 13 SVQETQTLLKEITKRKEVIFSKQLNTTINVMKRMAWEEIAQCVNAVGEGEQRTGTEVKRR 72

Query: 73 WADWKFKIRRK 83
          + DW+  ++RK
Sbjct: 73 YLDWRALMKRK 83


>AL834523-1|CAD39179.1|  345|Homo sapiens hypothetical protein
          protein.
          Length = 345

 Score = 37.9 bits (84), Expect = 0.032
 Identities = 21/71 (29%), Positives = 36/71 (50%)

Query: 13 SRKHLEILVKYMEKYPVLALSCARSREEVIEARKIWEKIAQSLNKVDEKVYKTGCKWSRY 72
          S +  + L+K + K   +  S   +    +  R  WE+IAQ +N V E   +TG +  R 
Sbjct: 13 SVQETQTLLKEITKRKEVIFSKQLNTTINVMKRMAWEEIAQCVNAVGEGEQRTGTEVKRR 72

Query: 73 WADWKFKIRRK 83
          + DW+  ++RK
Sbjct: 73 YLDWRALMKRK 83


>AB058729-1|BAB47455.1|  380|Homo sapiens KIAA1826 protein protein.
          Length = 380

 Score = 37.9 bits (84), Expect = 0.032
 Identities = 21/71 (29%), Positives = 36/71 (50%)

Query: 13  SRKHLEILVKYMEKYPVLALSCARSREEVIEARKIWEKIAQSLNKVDEKVYKTGCKWSRY 72
           S +  + L+K + K   +  S   +    +  R  WE+IAQ +N V E   +TG +  R 
Sbjct: 48  SVQETQTLLKEITKRKEVIFSKQLNTTINVMKRMAWEEIAQCVNAVGEGEQRTGTEVKRR 107

Query: 73  WADWKFKIRRK 83
           + DW+  ++RK
Sbjct: 108 YLDWRALMKRK 118


>BC044311-1|AAH44311.2|  399|Homo sapiens hypothetical protein
           LOC339344 protein.
          Length = 399

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 4/97 (4%)

Query: 18  EILVKYMEK-YPVLALSCARSREEVIEARKIWEKIAQSLNKVDEKVYKTGCKWSRYWADW 76
           +IL++ +   YP L  + +R R  V E R++W+ IA  +N +     +TG +  + W D+
Sbjct: 26  QILIREVRAHYPQLYGAQSR-RVSVAERRRVWDGIAAKINGI-TSWKRTGQEVQKRWNDF 83

Query: 77  KFKIRRKYICL-KKCQSNGVACSVRLSPYEQKVIKIL 112
           K + + K   +    Q  G A     S  E+ +  IL
Sbjct: 84  KRRTKEKLARVPHSTQGAGPAAEDAFSAEEETIFAIL 120


>D86964-1|BAA13200.1| 1842|Homo sapiens KIAA0209 protein.
          Length = 1842

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 104 YEQKVIK---ILTDEEGNLLSPSALSHISLFQESEGARSKST 142
           Y  K+++   I+ DE+GN+L P   S ISLF   E A  K T
Sbjct: 166 YGNKILELDLIVRDEDGNILDPDNTSVISLFHAHEEATDKIT 207


>BC113457-1|AAI13458.1| 1830|Homo sapiens dedicator of cytokinesis 2
           protein.
          Length = 1830

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 104 YEQKVIK---ILTDEEGNLLSPSALSHISLFQESEGARSKST 142
           Y  K+++   I+ DE+GN+L P   S ISLF   E A  K T
Sbjct: 154 YGNKILELDLIVRDEDGNILDPDNTSVISLFHAHEEATDKIT 195


>BC104900-1|AAI04901.1| 1830|Homo sapiens dedicator of cytokinesis 2
           protein.
          Length = 1830

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 104 YEQKVIK---ILTDEEGNLLSPSALSHISLFQESEGARSKST 142
           Y  K+++   I+ DE+GN+L P   S ISLF   E A  K T
Sbjct: 154 YGNKILELDLIVRDEDGNILDPDNTSVISLFHAHEEATDKIT 195


>BC126343-1|AAI26344.1|  514|Homo sapiens t-SNARE domain containing
           1 protein.
          Length = 514

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 31/135 (22%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 18  EILVKYMEKYPVLALSCARSREEVIEARKIWEKIAQSLNKVDEKVYKTGCKWSRYWADWK 77
           E+LV  + K+  L       + E     ++W +I Q++N +     +        W D +
Sbjct: 134 EVLVSKVSKHHQLLFGTGLLKAEPTRRYRVWSRILQAVNALG-YCRRDVVDLKHKWRDLR 192

Query: 78  FKIRRKYICLKKC-----QSNGVACSVRLSPYEQKVIKILT----DEEGNLLSPSALSHI 128
             +RRK   L+K        +G   ++ L+P EQ V K  +      EG  L P   + +
Sbjct: 193 AVVRRKLGDLRKAAHGPSPGSGKPQALALTPVEQVVAKTFSCQALPSEGFSLEPPRATQV 252

Query: 129 SLFQESEGARSKSTN 143
                 E  +  S N
Sbjct: 253 DPCNLQELFQEMSAN 267


>BC113556-1|AAI13557.1|  513|Homo sapiens t-SNARE domain containing
           1 protein.
          Length = 513

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 31/135 (22%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 18  EILVKYMEKYPVLALSCARSREEVIEARKIWEKIAQSLNKVDEKVYKTGCKWSRYWADWK 77
           E+LV  + K+  L       + E     ++W +I Q++N +     +        W D +
Sbjct: 134 EVLVSKVSKHHQLLFGTGLLKAEPTRRYRVWSRILQAVNALG-YCRRDVVDLKHKWRDLR 192

Query: 78  FKIRRKYICLKKC-----QSNGVACSVRLSPYEQKVIKILT----DEEGNLLSPSALSHI 128
             +RRK   L+K        +G   ++ L+P EQ V K  +      EG  L P   + +
Sbjct: 193 AVVRRKLGDLRKAAHGPSPGSGKPQALALTPVEQVVAKTFSCQALPSEGFSLEPPRATQV 252

Query: 129 SLFQESEGARSKSTN 143
                 E  +  S N
Sbjct: 253 DPCNLQELFQEMSAN 267


>BC033617-1|AAH33617.1|  519|Homo sapiens t-complex 11 (mouse)-like
           2 protein.
          Length = 519

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 159 LANNNEEIIHIEYADIKPN-LSQDPIELDHDRKSLEELRRDLLKF 202
           LA   + I+H  + D+  + L+ DP E +H  K  EE+R  LL F
Sbjct: 99  LAGRVKHIVHQAFWDVLDSELNADPPEFEHAIKLFEEIREILLSF 143


>AK055726-1|BAB70997.1|  513|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31164 fis, clone KIDNE1000104, weakly similar to
           SYNTAXIN 7. ).
          Length = 513

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 31/135 (22%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 18  EILVKYMEKYPVLALSCARSREEVIEARKIWEKIAQSLNKVDEKVYKTGCKWSRYWADWK 77
           E+LV  + K+  L       + E     ++W +I Q++N +     +        W D +
Sbjct: 134 EVLVSKVSKHHQLLFGTGLLKAEPTRRYRVWSRILQAVNALG-YCRRDVVDLKHKWRDLR 192

Query: 78  FKIRRKYICLKKC-----QSNGVACSVRLSPYEQKVIKILT----DEEGNLLSPSALSHI 128
             +RRK   L+K        +G   ++ L+P EQ V K  +      EG  L P   + +
Sbjct: 193 AVVRRKLGDLRKAAHGPSPGSGKPQALALTPVEQVVAKTFSCQALPSEGFSLEPPRATQV 252

Query: 129 SLFQESEGARSKSTN 143
                 E  +  S N
Sbjct: 253 DPCNLQELFQEMSAN 267


>X95712-1|CAA65016.1| 1442|Homo sapiens FMI protein protein.
          Length = 1442

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 45   RKIWEKIAQSLNKVDEKVYKTGCKWSRYWAD 75
            R +W++   S+  + + V   GCK SRYW +
Sbjct: 971  RMVWQEHCSSIVMITKLVEVAGCKCSRYWPE 1001


>BC041696-1|AAH41696.1|  509|Homo sapiens t-complex 11 (mouse)-like
           1 protein.
          Length = 509

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 164 EEIIHIEYAD-IKPNLSQDPIELDHDRKSLEELRRDLLKFEL 204
           +EI+H  + D +   LS+DP   DH  K + E++  LL F L
Sbjct: 105 KEIVHKAFWDCLSVQLSEDPPAYDHAIKLVGEIKETLLSFLL 146


>AL121926-3|CAC48254.1|  509|Homo sapiens dJ85M6.3 (similar to
           testis-specific protein PBS13) protein.
          Length = 509

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 164 EEIIHIEYAD-IKPNLSQDPIELDHDRKSLEELRRDLLKFEL 204
           +EI+H  + D +   LS+DP   DH  K + E++  LL F L
Sbjct: 105 KEIVHKAFWDCLSVQLSEDPPAYDHAIKLVGEIKETLLSFLL 146


>AK002198-1|BAA92131.1|  509|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11336 fis, clone PLACE1010661, weakly similar to
           TESTIS-SPECIFIC PROTEIN PBS13. ).
          Length = 509

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 164 EEIIHIEYAD-IKPNLSQDPIELDHDRKSLEELRRDLLKFEL 204
           +EI+H  + D +   LS+DP   DH  K + E++  LL F L
Sbjct: 105 KEIVHKAFWDCLSVQLSEDPPAYDHAIKLVGEIKETLLSFLL 146


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.318    0.134    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,837,369
Number of Sequences: 224733
Number of extensions: 1076883
Number of successful extensions: 2887
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2877
Number of HSP's gapped (non-prelim): 18
length of query: 242
length of database: 73,234,838
effective HSP length: 88
effective length of query: 154
effective length of database: 53,458,334
effective search space: 8232583436
effective search space used: 8232583436
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)

- SilkBase 1999-2023 -