Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001365-TA|BGIBMGA001365-PA|IPR001173|Glycosyl
transferase, family 2, IPR000772|Ricin B lectin, IPR008997|Ricin
B-related lectin
         (1098 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    26   1.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    25   3.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   6.5  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/20 (60%), Positives = 13/20 (65%)

Query: 355 FKLEAAEYFQVVRGFKVGGF 374
           FKL A EYFQ+   F VG F
Sbjct: 427 FKLYAVEYFQMYAQFIVGTF 446


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopressin
            receptor protein.
          Length = 403

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 1026 DVTKTSNKRIDKHKDLSNYDR 1046
            D+++ S    DKH+D +N DR
Sbjct: 10   DISENSTYLFDKHEDRNNTDR 30


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 529 QWYLDNVYEDKFVP 542
           QW LDN+Y+   +P
Sbjct: 510 QWILDNIYDQLIMP 523


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.135    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,414
Number of Sequences: 317
Number of extensions: 9771
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 4
length of query: 1098
length of database: 114,650
effective HSP length: 64
effective length of query: 1034
effective length of database: 94,362
effective search space: 97570308
effective search space used: 97570308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)