GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001365-TA|BGIBMGA001365-PA|IPR001173|Glycosyl
transferase, family 2, IPR000772|Ricin B lectin, IPR008997|Ricin
B-related lectin
         (1098 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    28   1.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    28   1.5  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              27   2.7  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 8/65 (12%)

Query: 70  GVAAYLTGEDKRLGEESEKKLAMNVHLSDRIAYN--------RTLKDYRNPACQRVVYDA 121
           G A       K LG   +  L    H+ D +A          RT  ++RNP C + VY+ 
Sbjct: 835 GTAVNRQNHAKDLGVLLDSSLNFKQHIDDVVARGNQLLGVVIRTTNEFRNPMCIKAVYNC 894

Query: 122 ELPSV 126
            + SV
Sbjct: 895 IVRSV 899


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query: 1009 NPGILVDDQRPAADVRSDVTKTSNKRIDKHKDLSNY 1044
            +PGIL DDQ P +   S+ +  + K +   K +SN+
Sbjct: 1479 SPGILSDDQPPESPCDSNDSDETTKNLPWLKSVSNF 1514


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 15/28 (53%), Positives = 16/28 (57%)

Query: 177 PGQDPTSSLVYLKEIILVDDNSTLPELK 204
           PGQ+ T   V LK    VDDN T  ELK
Sbjct: 392 PGQNETFESVSLKIRKAVDDNGTHKELK 419


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.135    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,061,260
Number of Sequences: 2123
Number of extensions: 44319
Number of successful extensions: 59
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55
Number of HSP's gapped (non-prelim): 4
length of query: 1098
length of database: 516,269
effective HSP length: 71
effective length of query: 1027
effective length of database: 365,536
effective search space: 375405472
effective search space used: 375405472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)