BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001365-TA|BGIBMGA001365-PA|IPR001173|Glycosyl
transferase, family 2, IPR000772|Ricin B lectin, IPR008997|Ricin
B-related lectin
(1098 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 28 0.36
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 27 0.63
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 27 0.84
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 27 0.84
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 27 0.84
AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex det... 27 0.84
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 27 0.84
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 26 1.9
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 25 3.4
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 25 3.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 4.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 4.5
DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein. 24 7.8
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 28.3 bits (60), Expect = 0.36
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 1019 PAADVRSDVTKTSNKRIDKHKDLSNYDRSRIRHVSGDGNIDQRQEDSFED-DNVLRG 1074
P D R N+ +DKH + + R + SG+G I + + + D VL G
Sbjct: 371 PCGDARIFSPHEENESVDKHPNRRARGQLRTKIESGEGTIPVKSSEGIQTWDGVLMG 427
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 27.5 bits (58), Expect = 0.63
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 1014 VDDQRPAADVRSDVTKTSNKRIDKHKDLSNYDRSRIRHVSGDGNIDQRQEDS-FEDDNVL 1072
+ + R V + ++ K K+ SN RSR R + R EDS ED N
Sbjct: 186 ITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDGNSY 245
Query: 1073 RGGGK 1077
R G+
Sbjct: 246 RNDGE 250
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.84
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 1014 VDDQRPAADVRSDVTKTSNKRIDKHKDLSNYDRSRIRHVSGDGNIDQRQEDS-FEDDNVL 1072
+ + R V + ++ K K+ SN RSR R + R EDS ED N
Sbjct: 186 ITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSY 245
Query: 1073 RGGGK 1077
R G+
Sbjct: 246 RNDGE 250
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.84
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 1014 VDDQRPAADVRSDVTKTSNKRIDKHKDLSNYDRSRIRHVSGDGNIDQRQEDS-FEDDNVL 1072
+ + R V + ++ K K+ SN RSR R + R EDS ED N
Sbjct: 186 ITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSY 245
Query: 1073 RGGGK 1077
R G+
Sbjct: 246 RNDGE 250
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.84
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 1014 VDDQRPAADVRSDVTKTSNKRIDKHKDLSNYDRSRIRHVSGDGNIDQRQEDS-FEDDNVL 1072
+ + R V + ++ K K+ SN RSR R + R EDS ED N
Sbjct: 186 ITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSY 245
Query: 1073 RGGGK 1077
R G+
Sbjct: 246 RNDGE 250
>AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 27.1 bits (57), Expect = 0.84
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 1014 VDDQRPAADVRSDVTKTSNKRIDKHKDLSNYDRSRIRHVSGDGNIDQRQEDS-FEDDNVL 1072
+ + R V + ++ K K+ SN RSR R + R EDS ED N
Sbjct: 186 ITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSY 245
Query: 1073 RGGGK 1077
R G+
Sbjct: 246 RNDGE 250
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.84
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 1014 VDDQRPAADVRSDVTKTSNKRIDKHKDLSNYDRSRIRHVSGDGNIDQRQEDS-FEDDNVL 1072
+ + R V + ++ K K+ SN RSR R + R EDS ED N
Sbjct: 186 ITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSY 245
Query: 1073 RGGGK 1077
R G+
Sbjct: 246 RNDGE 250
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 25.8 bits (54), Expect = 1.9
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 743 GGVTVLRD-AEIKKMKIKSHDDIDDVTT---SKPSHKKFKTTPSVKRI 786
G V VLR +E+K+ + + D+I+ +TT K HK ++R+
Sbjct: 9 GAVAVLRGTSEVKEAQTSTSDEIEKITTVEEEKICHKAITPLDRLQRV 56
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 25.0 bits (52), Expect = 3.4
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 370 KVGGFTFTGHFTWIDVPEREKKRRGS--DIAPTWSP--TMAGGLFAINRAYFWELGAYDE 425
K GG GH W+ + ++ K + + +SP + G L + A W +
Sbjct: 501 KTGGVNLKGHAHWLTLHFKDPKVESAFHNAEEAFSPLSLLGGPLVMVCSAPVWRFQPWGP 560
Query: 426 QMAGWGGENLEMSFRIWQCGGT 447
WGG + + F + G T
Sbjct: 561 --FTWGGIGVVVLFAVVLAGAT 580
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 25.0 bits (52), Expect = 3.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 524 KCKDFQWYLDNVYEDKFVPVRDVY 547
K KD+ ++D V +DK P++D Y
Sbjct: 144 KYKDYYIWVDPVKDDKGNPIKDKY 167
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 4.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 555 DVNDDTARRVLMTSCHGKQRGQKWKYIPSTSQ 586
+ N ++ RVLM + GK++ + Y PST +
Sbjct: 367 ETNRYSSGRVLMRTVRGKEKTCYYPYHPSTQE 398
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 4.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 555 DVNDDTARRVLMTSCHGKQRGQKWKYIPSTSQ 586
+ N ++ RVLM + GK++ + Y PST +
Sbjct: 367 ETNRYSSGRVLMRTVRGKEKTCYYPYHPSTQE 398
>DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein.
Length = 135
Score = 23.8 bits (49), Expect = 7.8
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 1057 NIDQRQEDSFEDDNV 1071
+IDQ++ED F D N+
Sbjct: 38 SIDQQKEDDFRDGNI 52
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.135 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,640
Number of Sequences: 429
Number of extensions: 12337
Number of successful extensions: 30
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 13
length of query: 1098
length of database: 140,377
effective HSP length: 65
effective length of query: 1033
effective length of database: 112,492
effective search space: 116204236
effective search space used: 116204236
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)
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