SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001364-TA|BGIBMGA001364-PA|IPR007234|Vps53-like,
N-terminal
         (801 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-727|AAF51022.2|  887|Drosophila melanogaster CG3338-PA ...   681   0.0  
AY058579-1|AAL13808.1|  683|Drosophila melanogaster LD27356p pro...   575   e-164
AY051614-1|AAK93038.1|  798|Drosophila melanogaster GH25973p pro...    32   2.7  
AE014297-2779|AAN13827.1|  625|Drosophila melanogaster CG5077-PD...    32   2.7  
AE014297-2778|AAN13826.3|  800|Drosophila melanogaster CG5077-PC...    32   2.7  
AE014297-2777|AAN13825.2|  799|Drosophila melanogaster CG5077-PB...    32   2.7  
AE014297-2776|AAG22160.2|  816|Drosophila melanogaster CG5077-PA...    32   2.7  
BT003800-1|AAO41483.1|  625|Drosophila melanogaster AT23163p pro...    32   3.6  
AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-P...    31   4.8  
AF346730-1|AAK50884.1|  942|Drosophila melanogaster cannonball p...    31   8.3  
AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    31   8.3  
AE014296-1810|AAF50162.1|  942|Drosophila melanogaster CG6577-PA...    31   8.3  

>AE014134-727|AAF51022.2|  887|Drosophila melanogaster CG3338-PA
           protein.
          Length = 887

 Score =  681 bits (1682), Expect = 0.0
 Identities = 359/802 (44%), Positives = 497/802 (61%), Gaps = 36/802 (4%)

Query: 17  QINFPSSVMSRIEELMGGTEQFDSDDFDAVAYINRVFPTEQSLSGVESAVARCEFRLSGV 76
           +I+F   V   I++++   +  D+ DF+ V YIN++FP EQSL+G++  + + +  +S +
Sbjct: 19  KIHFSKEVKQVIDKVLKTDDPMDAPDFNTVDYINQLFPNEQSLAGIDETIQKMQCEVSLI 78

Query: 77  EQDIRRLVXXXXXXXXXXXXXLTEAQRCIAELALQVADINKKAERSESMVREITCEIKQL 136
           + +IR +V             L EAQ+ I+ L   + D+  +AER+E MV+EIT +IKQL
Sbjct: 79  DDNIRSVVRGQTNTGQDGQLALCEAQKVISSLFSHIIDVKTRAERTEEMVKEITRDIKQL 138

Query: 137 DCAKCNLTAAITALNHLHMLAGGVDTLTTMTKNRQYKEIALPMQAIMEVLQHFECYRDIR 196
           DCAK NLTAAIT LNHLHML GG+++L  + + R Y EI  P+QAI EV QHF+ + DI 
Sbjct: 139 DCAKRNLTAAITTLNHLHMLVGGIESLNKLIERRSYGEILNPLQAITEVNQHFQQFSDIE 198

Query: 197 ELSVLRDQVHSIRHDLGNQILADFKQAFTGGSKSNITHRT----LSEACGVVDILDPKVK 252
           E+  L   V  I+  L  QI  DFK+AF+    S   HR     L++AC V+ +LDPKVK
Sbjct: 199 EIKNLSQSVDKIQVTLAQQITEDFKEAFSAKPSSQNQHRLGLNQLADACKVMSVLDPKVK 258

Query: 253 QDLLKWFISMQLQEYQHLYSSEQECAWLTHIERRYAWLKKHLLTFEDTLGNIFPYQWALS 312
           ++LLKWFI+ QL+EY HL+   Q+ AWL  I++RYAWLK+HLL FED  G +FP  W +S
Sbjct: 259 KELLKWFIAQQLEEYTHLFHENQDIAWLDKIDKRYAWLKRHLLDFEDKYGPVFPLDWEVS 318

Query: 313 ENIARQFCKITSTELSNLMAARRNELDVKLLLYAIQNTYNFELLLHKRFTGTDLKPDNVD 372
           E I  +FC+ T  +L+ +MA R NE+DV+LLL+AI  T  FE LL KRFTG  L      
Sbjct: 319 ERITVEFCRQTREQLAQIMAKRTNEIDVRLLLFAINKTQAFEQLLSKRFTGVTL------ 372

Query: 373 TNSKQPFDN-ETKDNTADSDGQQAEGSSSSWVGLIGSCFEPXXXXXXXXXXXXXXXXXER 431
               QP D          +DG  A G +  +   IG CF+P                 ++
Sbjct: 373 --GAQPTDKARVLAEPTTTDG--AVGLTV-FHDQIGQCFKPHLDIYIRSIDRNLSELMDK 427

Query: 432 FVQDAKTSPSEANMTASGEGAVISSCADLFLFYKKCLVQCARLTTGEPMLELAGVFQKYL 491
           FV+ ++    E    A  +  V  S  DLF+FYKKC+VQC +L+  +PM +LA VF+KYL
Sbjct: 428 FVEMSR----EPYKFAEAKTTVYPSSGDLFVFYKKCMVQCNQLSNEQPMYDLALVFKKYL 483

Query: 492 REYASSVLQAALPRTNP-TXXXXXXXXGNTVPSIVTNLHTLLRD------EAGNVSRYTK 544
           REYAS VL+ + P+  P T         + +   + NL T          + G+  R+ +
Sbjct: 484 REYASKVLEGSTPKLVPATTSSSIGKSVSLLTRDMQNLSTAAGQVFHNFLKEGDTQRFAR 543

Query: 545 QEISKITSVITTSEYCLETTIHLEQKLKEKVSPKLSDKIDLTPEQDLFHKIISNCIQMLV 604
            ++ +I  V+TT EYCLET   LE KLKEKV+     KID++ E+D+FH+IISNCIQ+LV
Sbjct: 544 DDLVRICCVLTTGEYCLETVQQLEDKLKEKVTSAYVSKIDMSEEKDVFHRIISNCIQLLV 603

Query: 605 QDLETACEPALQSMTKISWLSFDNVGDQSSYVTQIIMHLKNTVPNLRDNLSSSRKYFTQF 664
           QDLE  CE +LQ+M K+ W   +NVGDQS++++ +  + K TVP +RD L+SSRKYFTQF
Sbjct: 604 QDLEAGCEASLQAMAKVQWQHINNVGDQSAFISSLCGNFKQTVPTIRDTLASSRKYFTQF 663

Query: 665 CIRFANSFIPKFIQNVYKCK------PISTVGSEQLLLDTHMLKTALLELPSIGSEVKRA 718
           C RF  +FIPKFI  +Y+CK        + +G EQLLLDTH LKTALLELPS+GS V R 
Sbjct: 664 CHRFVAAFIPKFINVLYRCKLTLSDGSNNVLGCEQLLLDTHSLKTALLELPSVGSSVNRK 723

Query: 719 APATYTKVVLKLMTKAEMVLKLVMAPLEGNLEGFVTQFVKLLPDCSLAEFHKVLDMKGAK 778
           AP +YTKVV+K MT+AEM++K+VM P++     F  Q +KLLPD ++AE+ K+LDMK  K
Sbjct: 724 APTSYTKVVVKDMTRAEMIIKVVMTPVQPPAH-FTQQVLKLLPDITIAEYQKILDMKAVK 782

Query: 779 LSKTQMSNLDAVFKNACKSADV 800
             +     L  +FK+   +A V
Sbjct: 783 --RVDQLQLIDLFKHTASAAAV 802


>AY058579-1|AAL13808.1|  683|Drosophila melanogaster LD27356p
           protein.
          Length = 683

 Score =  575 bits (1420), Expect = e-164
 Identities = 298/679 (43%), Positives = 416/679 (61%), Gaps = 27/679 (3%)

Query: 17  QINFPSSVMSRIEELMGGTEQFDSDDFDAVAYINRVFPTEQSLSGVESAVARCEFRLSGV 76
           +I+F   V   I++++   +  D+ DF+ V YIN++FP EQSL+G++  + + +  +S +
Sbjct: 19  KIHFSKEVKQVIDKVLKTDDPMDAPDFNTVDYINQLFPNEQSLAGIDETIQKMQCEVSLI 78

Query: 77  EQDIRRLVXXXXXXXXXXXXXLTEAQRCIAELALQVADINKKAERSESMVREITCEIKQL 136
           + +IR +V             L EAQ+ I+ L   + D+  +AER+E MV+EIT +IKQL
Sbjct: 79  DDNIRSVVRGQTNTGQDGQLALCEAQKVISSLFSHIIDVKTRAERTEEMVKEITRDIKQL 138

Query: 137 DCAKCNLTAAITALNHLHMLAGGVDTLTTMTKNRQYKEIALPMQAIMEVLQHFECYRDIR 196
           DCAK NLTAAIT LNHLHML GG+++L  + + R Y EI  P+QAI EV QHF+ + DI 
Sbjct: 139 DCAKRNLTAAITTLNHLHMLVGGIESLNKLIERRSYGEILNPLQAITEVNQHFQQFSDIE 198

Query: 197 ELSVLRDQVHSIRHDLGNQILADFKQAFTGGSKSNITHR----TLSEACGVVDILDPKVK 252
           E+  L   V  I+  L  QI  DFK+AF+    S   HR     L++AC V+ +LDPKVK
Sbjct: 199 EIKNLSQSVDKIQVTLAQQITEDFKEAFSAKPSSQNQHRLGLNQLADACKVMSVLDPKVK 258

Query: 253 QDLLKWFISMQLQEYQHLYSSEQECAWLTHIERRYAWLKKHLLTFEDTLGNIFPYQWALS 312
           ++LLKWFI+ QL+EY HL+   Q+ AWL  I++RYAWLK+HLL FED  G +FP  W +S
Sbjct: 259 KELLKWFIAQQLEEYTHLFHENQDIAWLDKIDKRYAWLKRHLLDFEDKYGPVFPLDWEVS 318

Query: 313 ENIARQFCKITSTELSNLMAARRNELDVKLLLYAIQNTYNFELLLHKRFTGTDLKPDNVD 372
           E I  +FC+ T  +L+ +MA R NE+DV+LLL+AI  T  FE LL KRFTG  L      
Sbjct: 319 ERITVEFCRQTREQLAQIMAKRTNEIDVRLLLFAINKTQAFEQLLSKRFTGVTL------ 372

Query: 373 TNSKQPFDN-ETKDNTADSDGQQAEGSSSSWVGLIGSCFEPXXXXXXXXXXXXXXXXXER 431
               QP D          +DG  A G  + +   IG CF+P                 ++
Sbjct: 373 --GAQPTDKARVLAEPTTTDG--AVG-LTVFHDQIGQCFKPHLDIYIRSIDRNLSELMDK 427

Query: 432 FVQDAKTSPSEANMTASGEGAVISSCADLFLFYKKCLVQCARLTTGEPMLELAGVFQKYL 491
           FV+ ++    E    A  +  V  S  DLF+FYKKC+VQC +L+  +PM +LA VF+KYL
Sbjct: 428 FVEMSR----EPYKFAEAKTTVYPSSGDLFVFYKKCMVQCNQLSNEQPMYDLALVFKKYL 483

Query: 492 REYASSVLQAALPRTNP-TXXXXXXXXGNTVPSIVTNLHTLLRD------EAGNVSRYTK 544
           REYAS VL+ + P+  P T         + +   + NL T          + G+  R+ +
Sbjct: 484 REYASKVLEGSTPKLVPATTSSSIGKSVSLLTRDMQNLSTAAGQVFHNFLKEGDTQRFAR 543

Query: 545 QEISKITSVITTSEYCLETTIHLEQKLKEKVSPKLSDKIDLTPEQDLFHKIISNCIQMLV 604
            ++ +I  V+TT EYCLET   LE KLKEKV+     KID++ E+D+FH+IISNCIQ+LV
Sbjct: 544 DDLVRICCVLTTGEYCLETVQQLEDKLKEKVTSAYVSKIDMSEEKDVFHRIISNCIQLLV 603

Query: 605 QDLETACEPALQSMTKISWLSFDNVGDQSSYVTQIIMHLKNTVPNLRDNLSSSRKYFTQF 664
           QDLE  CE +LQ+M K+ W   +NVGDQS++++ +  + K TVP +RD L+SSRKYFTQF
Sbjct: 604 QDLEAGCEASLQAMAKVQWQHINNVGDQSAFISSLCGNFKQTVPTIRDTLASSRKYFTQF 663

Query: 665 CIRFANSFIPKFIQNVYKC 683
           C RF  +FIPKFI  +Y+C
Sbjct: 664 CHRFVAAFIPKFINVLYRC 682


>AY051614-1|AAK93038.1|  798|Drosophila melanogaster GH25973p
           protein.
          Length = 798

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 105 IAELALQVADINKKAERSESMVREITCEIKQLDCAKCNLTAAITALNHLHMLAGGVDTLT 164
           I +LAL V  +N+  E+    + EI+   ++L+  + +   +  + + LHML GGV + +
Sbjct: 719 IKQLALAVDQVNRVLEQHTRQLNEIS---QRLERMQYSPPPSSMSAHSLHMLGGGV-SQS 774

Query: 165 TMTKNRQYKEIALPMQAIMEVL 186
           T+ K+  Y  I L    I+  L
Sbjct: 775 TVIKSLIYALIGLAFSLILRWL 796


>AE014297-2779|AAN13827.1|  625|Drosophila melanogaster CG5077-PD,
           isoform D protein.
          Length = 625

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 105 IAELALQVADINKKAERSESMVREITCEIKQLDCAKCNLTAAITALNHLHMLAGGVDTLT 164
           I +LAL V  +N+  E+    + EI+   ++L+  + +   +  + + LHML GGV + +
Sbjct: 546 IKQLALAVDQVNRVLEQHTRQLNEIS---QRLERMQYSPPPSSMSAHSLHMLGGGV-SQS 601

Query: 165 TMTKNRQYKEIALPMQAIMEVL 186
           T+ K+  Y  I L    I+  L
Sbjct: 602 TVIKSLIYALIGLAFSLILRWL 623


>AE014297-2778|AAN13826.3|  800|Drosophila melanogaster CG5077-PC,
           isoform C protein.
          Length = 800

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 105 IAELALQVADINKKAERSESMVREITCEIKQLDCAKCNLTAAITALNHLHMLAGGVDTLT 164
           I +LAL V  +N+  E+    + EI+   ++L+  + +   +  + + LHML GGV + +
Sbjct: 721 IKQLALAVDQVNRVLEQHTRQLNEIS---QRLERMQYSPPPSSMSAHSLHMLGGGV-SQS 776

Query: 165 TMTKNRQYKEIALPMQAIMEVL 186
           T+ K+  Y  I L    I+  L
Sbjct: 777 TVIKSLIYALIGLAFSLILRWL 798


>AE014297-2777|AAN13825.2|  799|Drosophila melanogaster CG5077-PB,
           isoform B protein.
          Length = 799

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 105 IAELALQVADINKKAERSESMVREITCEIKQLDCAKCNLTAAITALNHLHMLAGGVDTLT 164
           I +LAL V  +N+  E+    + EI+   ++L+  + +   +  + + LHML GGV + +
Sbjct: 720 IKQLALAVDQVNRVLEQHTRQLNEIS---QRLERMQYSPPPSSMSAHSLHMLGGGV-SQS 775

Query: 165 TMTKNRQYKEIALPMQAIMEVL 186
           T+ K+  Y  I L    I+  L
Sbjct: 776 TVIKSLIYALIGLAFSLILRWL 797


>AE014297-2776|AAG22160.2|  816|Drosophila melanogaster CG5077-PA,
           isoform A protein.
          Length = 816

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 105 IAELALQVADINKKAERSESMVREITCEIKQLDCAKCNLTAAITALNHLHMLAGGVDTLT 164
           I +LAL V  +N+  E+    + EI+   ++L+  + +   +  + + LHML GGV + +
Sbjct: 737 IKQLALAVDQVNRVLEQHTRQLNEIS---QRLERMQYSPPPSSMSAHSLHMLGGGV-SQS 792

Query: 165 TMTKNRQYKEIALPMQAIMEVL 186
           T+ K+  Y  I L    I+  L
Sbjct: 793 TVIKSLIYALIGLAFSLILRWL 814


>BT003800-1|AAO41483.1|  625|Drosophila melanogaster AT23163p
           protein.
          Length = 625

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 105 IAELALQVADINKKAERSESMVREITCEIKQLDCAKCNLTAAITALNHLHMLAGGVDTLT 164
           I +LAL V  +N+  E+    + EI+   ++L+  + +   +  + + LHML GGV + +
Sbjct: 546 IKQLALAVDQVNRVLEQHTRQLNEIS---QRLERMQYSPPPSSMSAHSLHMLGGGV-SQS 601

Query: 165 TMTKNRQYKEIALPMQAIMEVL 186
           T+ K+  Y  I L    ++  L
Sbjct: 602 TVIKSLIYALIGLAFSLVLRWL 623


>AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-PH,
            isoform H protein.
          Length = 8805

 Score = 31.5 bits (68), Expect = 4.8
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 6/89 (6%)

Query: 506  TNPTXXXXXXXXGNTVPSIVTNLHTLLRDEAGNVSRYT----KQEISKITSVITTSEYCL 561
            T  T        GN  P +V ++ T ++++   V   T    K E+SKIT  ITT     
Sbjct: 3014 TTITTSSTTTETGNLEPVVVEDVSTTVKEDKVVVKPSTVPEDKTEVSKITETITT--VTS 3071

Query: 562  ETTIHLEQKLKEKVSPKLSDKIDLTPEQD 590
              T  + +K+ +K + + S K D    +D
Sbjct: 3072 NETDTVPEKISQKSASEESAKKDPVVTKD 3100


>AF346730-1|AAK50884.1|  942|Drosophila melanogaster cannonball
           protein.
          Length = 942

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 369 DNVDTNSKQPFDNETKDNTADSDGQQAEGSSSSWVGLI 406
           D++D  + + + +   D  +DSD   ++GS + W+  I
Sbjct: 83  DDIDDRNSEIWSSSESDKISDSDDSNSDGSPTEWINRI 120


>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
           protein.
          Length = 1333

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 6/126 (4%)

Query: 534 DEAGNVSRYTKQEISKITSVITTS-EYCLETTIHLEQKLKEKVSPKLSDKIDLTPEQDLF 592
           + + ++S   K  +SKI  +I  +   C E      +K K +V  K+ D      E D  
Sbjct: 94  ESSNDLSTNLKNILSKIKKIIVKAFNSCCENLRGTIEKAKREVEKKVKDIEIKYEEMDTE 153

Query: 593 HKIISNCIQMLVQDLETACEPALQSMTKISWLSFDNVGDQSSYVTQIIMHLKNTVPNLRD 652
               S+ I+  V+ LE   E    S+ K+      N G      T     LK  +  L  
Sbjct: 154 RSKRSDGIRKKVKQLERRIEAVKSSLDKLQKKMDTNDGK-----TNCGEELKEQISVLGS 208

Query: 653 NLSSSR 658
           N+S+S+
Sbjct: 209 NISTSK 214


>AE014296-1810|AAF50162.1|  942|Drosophila melanogaster CG6577-PA
           protein.
          Length = 942

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 369 DNVDTNSKQPFDNETKDNTADSDGQQAEGSSSSWVGLI 406
           D++D  + + + +   D  +DSD   ++GS + W+  I
Sbjct: 83  DDIDDRNSEIWSSSESDKISDSDDSNSDGSPTEWINRI 120


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.318    0.131    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,867,304
Number of Sequences: 52641
Number of extensions: 1373619
Number of successful extensions: 3806
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3792
Number of HSP's gapped (non-prelim): 18
length of query: 801
length of database: 24,830,863
effective HSP length: 91
effective length of query: 710
effective length of database: 20,040,532
effective search space: 14228777720
effective search space used: 14228777720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)

- SilkBase 1999-2023 -