BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001364-TA|BGIBMGA001364-PA|IPR007234|Vps53-like,
N-terminal
(801 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-727|AAF51022.2| 887|Drosophila melanogaster CG3338-PA ... 681 0.0
AY058579-1|AAL13808.1| 683|Drosophila melanogaster LD27356p pro... 575 e-164
AY051614-1|AAK93038.1| 798|Drosophila melanogaster GH25973p pro... 32 2.7
AE014297-2779|AAN13827.1| 625|Drosophila melanogaster CG5077-PD... 32 2.7
AE014297-2778|AAN13826.3| 800|Drosophila melanogaster CG5077-PC... 32 2.7
AE014297-2777|AAN13825.2| 799|Drosophila melanogaster CG5077-PB... 32 2.7
AE014297-2776|AAG22160.2| 816|Drosophila melanogaster CG5077-PA... 32 2.7
BT003800-1|AAO41483.1| 625|Drosophila melanogaster AT23163p pro... 32 3.6
AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-P... 31 4.8
AF346730-1|AAK50884.1| 942|Drosophila melanogaster cannonball p... 31 8.3
AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P... 31 8.3
AE014296-1810|AAF50162.1| 942|Drosophila melanogaster CG6577-PA... 31 8.3
>AE014134-727|AAF51022.2| 887|Drosophila melanogaster CG3338-PA
protein.
Length = 887
Score = 681 bits (1682), Expect = 0.0
Identities = 359/802 (44%), Positives = 497/802 (61%), Gaps = 36/802 (4%)
Query: 17 QINFPSSVMSRIEELMGGTEQFDSDDFDAVAYINRVFPTEQSLSGVESAVARCEFRLSGV 76
+I+F V I++++ + D+ DF+ V YIN++FP EQSL+G++ + + + +S +
Sbjct: 19 KIHFSKEVKQVIDKVLKTDDPMDAPDFNTVDYINQLFPNEQSLAGIDETIQKMQCEVSLI 78
Query: 77 EQDIRRLVXXXXXXXXXXXXXLTEAQRCIAELALQVADINKKAERSESMVREITCEIKQL 136
+ +IR +V L EAQ+ I+ L + D+ +AER+E MV+EIT +IKQL
Sbjct: 79 DDNIRSVVRGQTNTGQDGQLALCEAQKVISSLFSHIIDVKTRAERTEEMVKEITRDIKQL 138
Query: 137 DCAKCNLTAAITALNHLHMLAGGVDTLTTMTKNRQYKEIALPMQAIMEVLQHFECYRDIR 196
DCAK NLTAAIT LNHLHML GG+++L + + R Y EI P+QAI EV QHF+ + DI
Sbjct: 139 DCAKRNLTAAITTLNHLHMLVGGIESLNKLIERRSYGEILNPLQAITEVNQHFQQFSDIE 198
Query: 197 ELSVLRDQVHSIRHDLGNQILADFKQAFTGGSKSNITHRT----LSEACGVVDILDPKVK 252
E+ L V I+ L QI DFK+AF+ S HR L++AC V+ +LDPKVK
Sbjct: 199 EIKNLSQSVDKIQVTLAQQITEDFKEAFSAKPSSQNQHRLGLNQLADACKVMSVLDPKVK 258
Query: 253 QDLLKWFISMQLQEYQHLYSSEQECAWLTHIERRYAWLKKHLLTFEDTLGNIFPYQWALS 312
++LLKWFI+ QL+EY HL+ Q+ AWL I++RYAWLK+HLL FED G +FP W +S
Sbjct: 259 KELLKWFIAQQLEEYTHLFHENQDIAWLDKIDKRYAWLKRHLLDFEDKYGPVFPLDWEVS 318
Query: 313 ENIARQFCKITSTELSNLMAARRNELDVKLLLYAIQNTYNFELLLHKRFTGTDLKPDNVD 372
E I +FC+ T +L+ +MA R NE+DV+LLL+AI T FE LL KRFTG L
Sbjct: 319 ERITVEFCRQTREQLAQIMAKRTNEIDVRLLLFAINKTQAFEQLLSKRFTGVTL------ 372
Query: 373 TNSKQPFDN-ETKDNTADSDGQQAEGSSSSWVGLIGSCFEPXXXXXXXXXXXXXXXXXER 431
QP D +DG A G + + IG CF+P ++
Sbjct: 373 --GAQPTDKARVLAEPTTTDG--AVGLTV-FHDQIGQCFKPHLDIYIRSIDRNLSELMDK 427
Query: 432 FVQDAKTSPSEANMTASGEGAVISSCADLFLFYKKCLVQCARLTTGEPMLELAGVFQKYL 491
FV+ ++ E A + V S DLF+FYKKC+VQC +L+ +PM +LA VF+KYL
Sbjct: 428 FVEMSR----EPYKFAEAKTTVYPSSGDLFVFYKKCMVQCNQLSNEQPMYDLALVFKKYL 483
Query: 492 REYASSVLQAALPRTNP-TXXXXXXXXGNTVPSIVTNLHTLLRD------EAGNVSRYTK 544
REYAS VL+ + P+ P T + + + NL T + G+ R+ +
Sbjct: 484 REYASKVLEGSTPKLVPATTSSSIGKSVSLLTRDMQNLSTAAGQVFHNFLKEGDTQRFAR 543
Query: 545 QEISKITSVITTSEYCLETTIHLEQKLKEKVSPKLSDKIDLTPEQDLFHKIISNCIQMLV 604
++ +I V+TT EYCLET LE KLKEKV+ KID++ E+D+FH+IISNCIQ+LV
Sbjct: 544 DDLVRICCVLTTGEYCLETVQQLEDKLKEKVTSAYVSKIDMSEEKDVFHRIISNCIQLLV 603
Query: 605 QDLETACEPALQSMTKISWLSFDNVGDQSSYVTQIIMHLKNTVPNLRDNLSSSRKYFTQF 664
QDLE CE +LQ+M K+ W +NVGDQS++++ + + K TVP +RD L+SSRKYFTQF
Sbjct: 604 QDLEAGCEASLQAMAKVQWQHINNVGDQSAFISSLCGNFKQTVPTIRDTLASSRKYFTQF 663
Query: 665 CIRFANSFIPKFIQNVYKCK------PISTVGSEQLLLDTHMLKTALLELPSIGSEVKRA 718
C RF +FIPKFI +Y+CK + +G EQLLLDTH LKTALLELPS+GS V R
Sbjct: 664 CHRFVAAFIPKFINVLYRCKLTLSDGSNNVLGCEQLLLDTHSLKTALLELPSVGSSVNRK 723
Query: 719 APATYTKVVLKLMTKAEMVLKLVMAPLEGNLEGFVTQFVKLLPDCSLAEFHKVLDMKGAK 778
AP +YTKVV+K MT+AEM++K+VM P++ F Q +KLLPD ++AE+ K+LDMK K
Sbjct: 724 APTSYTKVVVKDMTRAEMIIKVVMTPVQPPAH-FTQQVLKLLPDITIAEYQKILDMKAVK 782
Query: 779 LSKTQMSNLDAVFKNACKSADV 800
+ L +FK+ +A V
Sbjct: 783 --RVDQLQLIDLFKHTASAAAV 802
>AY058579-1|AAL13808.1| 683|Drosophila melanogaster LD27356p
protein.
Length = 683
Score = 575 bits (1420), Expect = e-164
Identities = 298/679 (43%), Positives = 416/679 (61%), Gaps = 27/679 (3%)
Query: 17 QINFPSSVMSRIEELMGGTEQFDSDDFDAVAYINRVFPTEQSLSGVESAVARCEFRLSGV 76
+I+F V I++++ + D+ DF+ V YIN++FP EQSL+G++ + + + +S +
Sbjct: 19 KIHFSKEVKQVIDKVLKTDDPMDAPDFNTVDYINQLFPNEQSLAGIDETIQKMQCEVSLI 78
Query: 77 EQDIRRLVXXXXXXXXXXXXXLTEAQRCIAELALQVADINKKAERSESMVREITCEIKQL 136
+ +IR +V L EAQ+ I+ L + D+ +AER+E MV+EIT +IKQL
Sbjct: 79 DDNIRSVVRGQTNTGQDGQLALCEAQKVISSLFSHIIDVKTRAERTEEMVKEITRDIKQL 138
Query: 137 DCAKCNLTAAITALNHLHMLAGGVDTLTTMTKNRQYKEIALPMQAIMEVLQHFECYRDIR 196
DCAK NLTAAIT LNHLHML GG+++L + + R Y EI P+QAI EV QHF+ + DI
Sbjct: 139 DCAKRNLTAAITTLNHLHMLVGGIESLNKLIERRSYGEILNPLQAITEVNQHFQQFSDIE 198
Query: 197 ELSVLRDQVHSIRHDLGNQILADFKQAFTGGSKSNITHR----TLSEACGVVDILDPKVK 252
E+ L V I+ L QI DFK+AF+ S HR L++AC V+ +LDPKVK
Sbjct: 199 EIKNLSQSVDKIQVTLAQQITEDFKEAFSAKPSSQNQHRLGLNQLADACKVMSVLDPKVK 258
Query: 253 QDLLKWFISMQLQEYQHLYSSEQECAWLTHIERRYAWLKKHLLTFEDTLGNIFPYQWALS 312
++LLKWFI+ QL+EY HL+ Q+ AWL I++RYAWLK+HLL FED G +FP W +S
Sbjct: 259 KELLKWFIAQQLEEYTHLFHENQDIAWLDKIDKRYAWLKRHLLDFEDKYGPVFPLDWEVS 318
Query: 313 ENIARQFCKITSTELSNLMAARRNELDVKLLLYAIQNTYNFELLLHKRFTGTDLKPDNVD 372
E I +FC+ T +L+ +MA R NE+DV+LLL+AI T FE LL KRFTG L
Sbjct: 319 ERITVEFCRQTREQLAQIMAKRTNEIDVRLLLFAINKTQAFEQLLSKRFTGVTL------ 372
Query: 373 TNSKQPFDN-ETKDNTADSDGQQAEGSSSSWVGLIGSCFEPXXXXXXXXXXXXXXXXXER 431
QP D +DG A G + + IG CF+P ++
Sbjct: 373 --GAQPTDKARVLAEPTTTDG--AVG-LTVFHDQIGQCFKPHLDIYIRSIDRNLSELMDK 427
Query: 432 FVQDAKTSPSEANMTASGEGAVISSCADLFLFYKKCLVQCARLTTGEPMLELAGVFQKYL 491
FV+ ++ E A + V S DLF+FYKKC+VQC +L+ +PM +LA VF+KYL
Sbjct: 428 FVEMSR----EPYKFAEAKTTVYPSSGDLFVFYKKCMVQCNQLSNEQPMYDLALVFKKYL 483
Query: 492 REYASSVLQAALPRTNP-TXXXXXXXXGNTVPSIVTNLHTLLRD------EAGNVSRYTK 544
REYAS VL+ + P+ P T + + + NL T + G+ R+ +
Sbjct: 484 REYASKVLEGSTPKLVPATTSSSIGKSVSLLTRDMQNLSTAAGQVFHNFLKEGDTQRFAR 543
Query: 545 QEISKITSVITTSEYCLETTIHLEQKLKEKVSPKLSDKIDLTPEQDLFHKIISNCIQMLV 604
++ +I V+TT EYCLET LE KLKEKV+ KID++ E+D+FH+IISNCIQ+LV
Sbjct: 544 DDLVRICCVLTTGEYCLETVQQLEDKLKEKVTSAYVSKIDMSEEKDVFHRIISNCIQLLV 603
Query: 605 QDLETACEPALQSMTKISWLSFDNVGDQSSYVTQIIMHLKNTVPNLRDNLSSSRKYFTQF 664
QDLE CE +LQ+M K+ W +NVGDQS++++ + + K TVP +RD L+SSRKYFTQF
Sbjct: 604 QDLEAGCEASLQAMAKVQWQHINNVGDQSAFISSLCGNFKQTVPTIRDTLASSRKYFTQF 663
Query: 665 CIRFANSFIPKFIQNVYKC 683
C RF +FIPKFI +Y+C
Sbjct: 664 CHRFVAAFIPKFINVLYRC 682
>AY051614-1|AAK93038.1| 798|Drosophila melanogaster GH25973p
protein.
Length = 798
Score = 32.3 bits (70), Expect = 2.7
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 105 IAELALQVADINKKAERSESMVREITCEIKQLDCAKCNLTAAITALNHLHMLAGGVDTLT 164
I +LAL V +N+ E+ + EI+ ++L+ + + + + + LHML GGV + +
Sbjct: 719 IKQLALAVDQVNRVLEQHTRQLNEIS---QRLERMQYSPPPSSMSAHSLHMLGGGV-SQS 774
Query: 165 TMTKNRQYKEIALPMQAIMEVL 186
T+ K+ Y I L I+ L
Sbjct: 775 TVIKSLIYALIGLAFSLILRWL 796
>AE014297-2779|AAN13827.1| 625|Drosophila melanogaster CG5077-PD,
isoform D protein.
Length = 625
Score = 32.3 bits (70), Expect = 2.7
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 105 IAELALQVADINKKAERSESMVREITCEIKQLDCAKCNLTAAITALNHLHMLAGGVDTLT 164
I +LAL V +N+ E+ + EI+ ++L+ + + + + + LHML GGV + +
Sbjct: 546 IKQLALAVDQVNRVLEQHTRQLNEIS---QRLERMQYSPPPSSMSAHSLHMLGGGV-SQS 601
Query: 165 TMTKNRQYKEIALPMQAIMEVL 186
T+ K+ Y I L I+ L
Sbjct: 602 TVIKSLIYALIGLAFSLILRWL 623
>AE014297-2778|AAN13826.3| 800|Drosophila melanogaster CG5077-PC,
isoform C protein.
Length = 800
Score = 32.3 bits (70), Expect = 2.7
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 105 IAELALQVADINKKAERSESMVREITCEIKQLDCAKCNLTAAITALNHLHMLAGGVDTLT 164
I +LAL V +N+ E+ + EI+ ++L+ + + + + + LHML GGV + +
Sbjct: 721 IKQLALAVDQVNRVLEQHTRQLNEIS---QRLERMQYSPPPSSMSAHSLHMLGGGV-SQS 776
Query: 165 TMTKNRQYKEIALPMQAIMEVL 186
T+ K+ Y I L I+ L
Sbjct: 777 TVIKSLIYALIGLAFSLILRWL 798
>AE014297-2777|AAN13825.2| 799|Drosophila melanogaster CG5077-PB,
isoform B protein.
Length = 799
Score = 32.3 bits (70), Expect = 2.7
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 105 IAELALQVADINKKAERSESMVREITCEIKQLDCAKCNLTAAITALNHLHMLAGGVDTLT 164
I +LAL V +N+ E+ + EI+ ++L+ + + + + + LHML GGV + +
Sbjct: 720 IKQLALAVDQVNRVLEQHTRQLNEIS---QRLERMQYSPPPSSMSAHSLHMLGGGV-SQS 775
Query: 165 TMTKNRQYKEIALPMQAIMEVL 186
T+ K+ Y I L I+ L
Sbjct: 776 TVIKSLIYALIGLAFSLILRWL 797
>AE014297-2776|AAG22160.2| 816|Drosophila melanogaster CG5077-PA,
isoform A protein.
Length = 816
Score = 32.3 bits (70), Expect = 2.7
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 105 IAELALQVADINKKAERSESMVREITCEIKQLDCAKCNLTAAITALNHLHMLAGGVDTLT 164
I +LAL V +N+ E+ + EI+ ++L+ + + + + + LHML GGV + +
Sbjct: 737 IKQLALAVDQVNRVLEQHTRQLNEIS---QRLERMQYSPPPSSMSAHSLHMLGGGV-SQS 792
Query: 165 TMTKNRQYKEIALPMQAIMEVL 186
T+ K+ Y I L I+ L
Sbjct: 793 TVIKSLIYALIGLAFSLILRWL 814
>BT003800-1|AAO41483.1| 625|Drosophila melanogaster AT23163p
protein.
Length = 625
Score = 31.9 bits (69), Expect = 3.6
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 105 IAELALQVADINKKAERSESMVREITCEIKQLDCAKCNLTAAITALNHLHMLAGGVDTLT 164
I +LAL V +N+ E+ + EI+ ++L+ + + + + + LHML GGV + +
Sbjct: 546 IKQLALAVDQVNRVLEQHTRQLNEIS---QRLERMQYSPPPSSMSAHSLHMLGGGV-SQS 601
Query: 165 TMTKNRQYKEIALPMQAIMEVL 186
T+ K+ Y I L ++ L
Sbjct: 602 TVIKSLIYALIGLAFSLVLRWL 623
>AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-PH,
isoform H protein.
Length = 8805
Score = 31.5 bits (68), Expect = 4.8
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 506 TNPTXXXXXXXXGNTVPSIVTNLHTLLRDEAGNVSRYT----KQEISKITSVITTSEYCL 561
T T GN P +V ++ T ++++ V T K E+SKIT ITT
Sbjct: 3014 TTITTSSTTTETGNLEPVVVEDVSTTVKEDKVVVKPSTVPEDKTEVSKITETITT--VTS 3071
Query: 562 ETTIHLEQKLKEKVSPKLSDKIDLTPEQD 590
T + +K+ +K + + S K D +D
Sbjct: 3072 NETDTVPEKISQKSASEESAKKDPVVTKD 3100
>AF346730-1|AAK50884.1| 942|Drosophila melanogaster cannonball
protein.
Length = 942
Score = 30.7 bits (66), Expect = 8.3
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 369 DNVDTNSKQPFDNETKDNTADSDGQQAEGSSSSWVGLI 406
D++D + + + + D +DSD ++GS + W+ I
Sbjct: 83 DDIDDRNSEIWSSSESDKISDSDDSNSDGSPTEWINRI 120
>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
protein.
Length = 1333
Score = 30.7 bits (66), Expect = 8.3
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 6/126 (4%)
Query: 534 DEAGNVSRYTKQEISKITSVITTS-EYCLETTIHLEQKLKEKVSPKLSDKIDLTPEQDLF 592
+ + ++S K +SKI +I + C E +K K +V K+ D E D
Sbjct: 94 ESSNDLSTNLKNILSKIKKIIVKAFNSCCENLRGTIEKAKREVEKKVKDIEIKYEEMDTE 153
Query: 593 HKIISNCIQMLVQDLETACEPALQSMTKISWLSFDNVGDQSSYVTQIIMHLKNTVPNLRD 652
S+ I+ V+ LE E S+ K+ N G T LK + L
Sbjct: 154 RSKRSDGIRKKVKQLERRIEAVKSSLDKLQKKMDTNDGK-----TNCGEELKEQISVLGS 208
Query: 653 NLSSSR 658
N+S+S+
Sbjct: 209 NISTSK 214
>AE014296-1810|AAF50162.1| 942|Drosophila melanogaster CG6577-PA
protein.
Length = 942
Score = 30.7 bits (66), Expect = 8.3
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 369 DNVDTNSKQPFDNETKDNTADSDGQQAEGSSSSWVGLI 406
D++D + + + + D +DSD ++GS + W+ I
Sbjct: 83 DDIDDRNSEIWSSSESDKISDSDDSNSDGSPTEWINRI 120
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.318 0.131 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,867,304
Number of Sequences: 52641
Number of extensions: 1373619
Number of successful extensions: 3806
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3792
Number of HSP's gapped (non-prelim): 18
length of query: 801
length of database: 24,830,863
effective HSP length: 91
effective length of query: 710
effective length of database: 20,040,532
effective search space: 14228777720
effective search space used: 14228777720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)
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