Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001363-TA|BGIBMGA001363-PA|IPR001931|Ribosomal protein
S21e
         (81 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015189-1|AAT94418.1|   83|Drosophila melanogaster RH57501p pro...   140   3e-34
AJ009557-1|CAA08751.1|   83|Drosophila melanogaster ribosomal pr...   140   3e-34
AE014134-497|AAN10394.1|   83|Drosophila melanogaster CG2986-PD,...   140   3e-34
AE014134-496|AAN10393.1|   83|Drosophila melanogaster CG2986-PC,...   140   3e-34
AE014134-495|AAN10392.1|   83|Drosophila melanogaster CG2986-PB,...   140   3e-34
AE014134-494|AAF51191.1|   83|Drosophila melanogaster CG2986-PA,...   140   3e-34
BT030210-1|ABN49349.1|  158|Drosophila melanogaster IP18075p pro...    92   7e-20
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi...    26   7.2  
AF318273-1|AAK13421.1| 1220|Drosophila melanogaster metabotropic...    26   7.2  
AF145639-1|AAD38614.1| 1221|Drosophila melanogaster BcDNA.GH0731...    26   7.2  
AE014297-3037|AAF55916.1| 1221|Drosophila melanogaster CG6706-PB...    26   7.2  
AE014297-3036|AAN13882.1| 1220|Drosophila melanogaster CG6706-PA...    26   7.2  
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA...    26   7.2  
AY084143-1|AAL89881.1|  620|Drosophila melanogaster RE25260p pro...    25   9.5  
AE013599-737|AAF59028.2|  620|Drosophila melanogaster CG30349-PA...    25   9.5  

>BT015189-1|AAT94418.1|   83|Drosophila melanogaster RH57501p
          protein.
          Length = 83

 Score =  140 bits (338), Expect = 3e-34
 Identities = 64/81 (79%), Positives = 68/81 (83%)

Query: 1  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 60
          M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR  D SK Y +CG IR
Sbjct: 1  MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIR 60

Query: 61 RMGESDDCIVRLTKKDGILAK 81
          RMGESDDCIVRL KKDGI+ K
Sbjct: 61 RMGESDDCIVRLAKKDGIITK 81


>AJ009557-1|CAA08751.1|   83|Drosophila melanogaster ribosomal
          protein S21 protein.
          Length = 83

 Score =  140 bits (338), Expect = 3e-34
 Identities = 64/81 (79%), Positives = 68/81 (83%)

Query: 1  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 60
          M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR  D SK Y +CG IR
Sbjct: 1  MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIR 60

Query: 61 RMGESDDCIVRLTKKDGILAK 81
          RMGESDDCIVRL KKDGI+ K
Sbjct: 61 RMGESDDCIVRLAKKDGIITK 81


>AE014134-497|AAN10394.1|   83|Drosophila melanogaster CG2986-PD,
          isoform D protein.
          Length = 83

 Score =  140 bits (338), Expect = 3e-34
 Identities = 64/81 (79%), Positives = 68/81 (83%)

Query: 1  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 60
          M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR  D SK Y +CG IR
Sbjct: 1  MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIR 60

Query: 61 RMGESDDCIVRLTKKDGILAK 81
          RMGESDDCIVRL KKDGI+ K
Sbjct: 61 RMGESDDCIVRLAKKDGIITK 81


>AE014134-496|AAN10393.1|   83|Drosophila melanogaster CG2986-PC,
          isoform C protein.
          Length = 83

 Score =  140 bits (338), Expect = 3e-34
 Identities = 64/81 (79%), Positives = 68/81 (83%)

Query: 1  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 60
          M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR  D SK Y +CG IR
Sbjct: 1  MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIR 60

Query: 61 RMGESDDCIVRLTKKDGILAK 81
          RMGESDDCIVRL KKDGI+ K
Sbjct: 61 RMGESDDCIVRLAKKDGIITK 81


>AE014134-495|AAN10392.1|   83|Drosophila melanogaster CG2986-PB,
          isoform B protein.
          Length = 83

 Score =  140 bits (338), Expect = 3e-34
 Identities = 64/81 (79%), Positives = 68/81 (83%)

Query: 1  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 60
          M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR  D SK Y +CG IR
Sbjct: 1  MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIR 60

Query: 61 RMGESDDCIVRLTKKDGILAK 81
          RMGESDDCIVRL KKDGI+ K
Sbjct: 61 RMGESDDCIVRLAKKDGIITK 81


>AE014134-494|AAF51191.1|   83|Drosophila melanogaster CG2986-PA,
          isoform A protein.
          Length = 83

 Score =  140 bits (338), Expect = 3e-34
 Identities = 64/81 (79%), Positives = 68/81 (83%)

Query: 1  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 60
          M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR  D SK Y +CG IR
Sbjct: 1  MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIR 60

Query: 61 RMGESDDCIVRLTKKDGILAK 81
          RMGESDDCIVRL KKDGI+ K
Sbjct: 61 RMGESDDCIVRLAKKDGIITK 81


>BT030210-1|ABN49349.1|  158|Drosophila melanogaster IP18075p
          protein.
          Length = 158

 Score = 92.3 bits (219), Expect = 7e-20
 Identities = 42/55 (76%), Positives = 45/55 (81%)

Query: 1  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVV 55
          M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR  D SK Y +
Sbjct: 17 MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAI 71


>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
            ubiquitin-conjugatingenzyme protein.
          Length = 4876

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 9    VDLYCPRKCSASNRLIHAKDHASVQLVIADVDPA 42
            +D++C  + +   RL+   D  +  LV++D+ PA
Sbjct: 1779 IDIWCFDEETDCTRLVQVNDIQTKTLVLSDIQPA 1812


>AF318273-1|AAK13421.1| 1220|Drosophila melanogaster metabotropic
            GABA-B receptor subtype2 protein.
          Length = 1220

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 14/40 (35%), Positives = 18/40 (45%)

Query: 14   PRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMY 53
            PRK S S+ + HA  H S   V  D   +  R    S +Y
Sbjct: 1128 PRKVSRSSNIQHAAHHHSSPNVAPDKQRSRQRGKQDSSIY 1167


>AF145639-1|AAD38614.1| 1221|Drosophila melanogaster BcDNA.GH07312
            protein.
          Length = 1221

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 14/40 (35%), Positives = 18/40 (45%)

Query: 14   PRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMY 53
            PRK S S+ + HA  H S   V  D   +  R    S +Y
Sbjct: 1129 PRKVSRSSNIQHAAHHHSSPNVAPDKQRSRQRGKQDSSIY 1168


>AE014297-3037|AAF55916.1| 1221|Drosophila melanogaster CG6706-PB,
            isoform B protein.
          Length = 1221

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 14/40 (35%), Positives = 18/40 (45%)

Query: 14   PRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMY 53
            PRK S S+ + HA  H S   V  D   +  R    S +Y
Sbjct: 1129 PRKVSRSSNIQHAAHHHSSPNVAPDKQRSRQRGKQDSSIY 1168


>AE014297-3036|AAN13882.1| 1220|Drosophila melanogaster CG6706-PA,
            isoform A protein.
          Length = 1220

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 14/40 (35%), Positives = 18/40 (45%)

Query: 14   PRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMY 53
            PRK S S+ + HA  H S   V  D   +  R    S +Y
Sbjct: 1128 PRKVSRSSNIQHAAHHHSSPNVAPDKQRSRQRGKQDSSIY 1167


>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
            protein.
          Length = 4876

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 9    VDLYCPRKCSASNRLIHAKDHASVQLVIADVDPA 42
            +D++C  + +   RL+   D  +  LV++D+ PA
Sbjct: 1779 IDIWCFDEETDCTRLVQVNDIQTKTLVLSDIQPA 1812


>AY084143-1|AAL89881.1|  620|Drosophila melanogaster RE25260p
           protein.
          Length = 620

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 24  IHAKDHASVQLVIADVDPAT 43
           +H+KD A +Q V++  DP T
Sbjct: 435 LHSKDQAMIQAVLSTQDPET 454


>AE013599-737|AAF59028.2|  620|Drosophila melanogaster CG30349-PA
           protein.
          Length = 620

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 24  IHAKDHASVQLVIADVDPAT 43
           +H+KD A +Q V++  DP T
Sbjct: 435 LHSKDQAMIQAVLSTQDPET 454


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.134    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,685,545
Number of Sequences: 52641
Number of extensions: 112314
Number of successful extensions: 195
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 180
Number of HSP's gapped (non-prelim): 15
length of query: 81
length of database: 24,830,863
effective HSP length: 61
effective length of query: 20
effective length of database: 21,619,762
effective search space: 432395240
effective search space used: 432395240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)