GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001363-TA|BGIBMGA001363-PA|IPR001931|Ribosomal protein
S21e
         (81 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   2.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   2.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   2.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   2.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   2.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    20   2.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    20   2.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    20   2.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    20   2.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    20   2.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    20   2.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    20   2.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    20   2.9  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           19   5.1  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)

Query: 56  CGAIRRMGESDDCIVRLTKKD 76
           CG++R + E  DC    ++K+
Sbjct: 413 CGSLREIKEVSDCDSSESRKE 433


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 11  LYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAAD 48
           ++C     AS  +        +Q+ ++ VDPAT +  D
Sbjct: 298 VFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEID 335


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 11  LYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAAD 48
           ++C     AS  +        +Q+ ++ VDPAT +  D
Sbjct: 298 VFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEID 335


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory
          receptor candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 7/33 (21%)

Query: 13 CP---RKCSASNRLIHA----KDHASVQLVIAD 38
          CP   RKC+ SN  +H+    +  AS+Q+ I D
Sbjct: 12 CPVKKRKCTVSNVSLHSLKNKRSGASLQVGILD 44


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 11  LYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAAD 48
           ++C     AS  +        +Q+ ++ VDPAT +  D
Sbjct: 298 VFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEID 335


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 1   MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAA 47
           +Q   G++  L   R  S   +  + + H S     AD   +TG A+
Sbjct: 66  LQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 1   MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAA 47
           +Q   G++  L   R  S   +  + + H S     AD   +TG A+
Sbjct: 66  LQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 1   MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAA 47
           +Q   G++  L   R  S   +  + + H S     AD   +TG A+
Sbjct: 66  LQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 1   MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAA 47
           +Q   G++  L   R  S   +  + + H S     AD   +TG A+
Sbjct: 66  LQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 1   MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAA 47
           +Q   G++  L   R  S   +  + + H S     AD   +TG A+
Sbjct: 66  LQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
          protein.
          Length = 268

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 1  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAA 47
          +Q   G++  L   R  S   +  + + H S     AD   +TG A+
Sbjct: 22 LQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 68


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 1   MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAA 47
           +Q   G++  L   R  S   +  + + H S     AD   +TG A+
Sbjct: 66  LQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 1   MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAA 47
           +Q   G++  L   R  S   +  + + H S     AD   +TG A+
Sbjct: 66  LQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)

Query: 30  ASVQLVIADVDPATGRAA 47
           ASV    A   P+TGR A
Sbjct: 114 ASVAAAFAPQGPSTGRGA 131


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.134    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,140
Number of Sequences: 317
Number of extensions: 454
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of query: 81
length of database: 114,650
effective HSP length: 46
effective length of query: 35
effective length of database: 100,068
effective search space:  3502380
effective search space used:  3502380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.6 bits)
S2: 36 (18.6 bits)