GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001363-TA|BGIBMGA001363-PA|IPR001931|Ribosomal protein
S21e
         (81 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    22   3.1  
L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    21   7.1  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    21   7.1  
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    21   7.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    21   7.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    20   9.3  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
          gambiae putativetubulin alpha chain mRNA, complete cds.
          ).
          Length = 91

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 14/50 (28%), Positives = 20/50 (40%)

Query: 19 ASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDC 68
          ASNR +        + V+    P++ R A  S   V C +I     S  C
Sbjct: 29 ASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78


>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier
          protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)

Query: 67 DCIVRLTKKDGI 78
          DC VR+ K+ GI
Sbjct: 58 DCFVRIPKEQGI 69


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier
          protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)

Query: 67 DCIVRLTKKDGI 78
          DC VR+ K+ GI
Sbjct: 58 DCFVRIPKEQGI 69


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
          protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)

Query: 67 DCIVRLTKKDGI 78
          DC VR+ K+ GI
Sbjct: 58 DCFVRIPKEQGI 69


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 8   FVDLYCPRKCSASNR 22
           F+ L CP  C+ +NR
Sbjct: 677 FMHLGCPHGCNDANR 691


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 15/48 (31%), Positives = 20/48 (41%)

Query: 18   SASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGES 65
            S+S+      D  S   V+AD   +T     TS      G I+R G S
Sbjct: 973  SSSSTADRNGDTKSRSPVVADGHNSTNVIKSTSSADETGGVIKRSGSS 1020


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.134    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,010
Number of Sequences: 2123
Number of extensions: 2527
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 81
length of database: 516,269
effective HSP length: 53
effective length of query: 28
effective length of database: 403,750
effective search space: 11305000
effective search space used: 11305000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 40 (20.2 bits)