GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001362-TA|BGIBMGA001362-PA|undefined
         (60 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3LS31 Cluster: Predicted protein; n=3; Saccharomycetal...    33   1.1  

>UniRef50_A3LS31 Cluster: Predicted protein; n=3;
          Saccharomycetales|Rep: Predicted protein - Pichia
          stipitis (Yeast)
          Length = 533

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 12 GTRTSSLDQLDFQERRQLIASSLSLTDFLHVGAKEVAAVAG 52
          G  T  ++++  +ERR L A+  SL  FLHV    +AA  G
Sbjct: 42 GIETRGIERVSTEERRSLAANKSSLNRFLHVFGLWIAACGG 82


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.317    0.128    0.338 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,088,325
Number of Sequences: 1657284
Number of extensions: 1205896
Number of successful extensions: 3107
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3106
Number of HSP's gapped (non-prelim): 1
length of query: 60
length of database: 575,637,011
effective HSP length: 40
effective length of query: 20
effective length of database: 509,345,651
effective search space: 10186913020
effective search space used: 10186913020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)