Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001361-TA|BGIBMGA001361-PA|IPR002557|Chitin binding
Peritrophin-A
(351 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1357 + 36632992-36633621,36634003-36635136,36635525-366361... 38 0.016
12_01_0419 - 3316866-3318172,3318249-3318360 33 0.45
11_05_0089 + 18975637-18977439 32 0.60
07_03_0908 + 22507565-22507810,22507925-22508872,22509314-225103... 31 1.4
07_01_0985 - 8297560-8297610,8297728-8297939,8298327-8298449,829... 31 1.4
06_03_1268 + 28862095-28862231,28862651-28862753,28862901-28863050 31 1.8
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230 31 1.8
09_03_0040 + 11816056-11819069,11819837-11820428 30 3.2
09_01_0029 - 490433-490591,490930-491019,491860-492608,492996-49... 30 3.2
05_07_0233 + 28559786-28559861,28560007-28560230,28560345-285603... 30 3.2
03_02_0853 + 11786022-11786105,11786509-11786592,11786915-11787925 30 3.2
01_06_1577 - 38379951-38380167,38380349-38380543,38380919-383811... 30 3.2
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 29 4.2
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 29 4.2
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 29 4.2
01_04_0120 + 16242220-16242483,16242538-16243424,16244604-162452... 29 4.2
01_01_0556 + 4090432-4090500,4091414-4092030,4092408-4092533,409... 29 4.2
12_02_0603 - 20915447-20915920 29 5.6
08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,438... 29 5.6
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763... 29 5.6
04_04_0175 - 23307507-23308688,23308962-23309647,23310662-23310680 29 5.6
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668... 29 5.6
07_01_0166 + 1164903-1165144,1165839-1166074,1166719-1166781,116... 29 7.4
02_04_0324 + 22032748-22032895,22035274-22035593,22035709-22036797 29 7.4
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 28 9.7
06_03_1186 - 28260487-28262112,28262205-28262345,28262429-282625... 28 9.7
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 28 9.7
05_07_0310 + 29135875-29136052,29136206-29136617,29136723-291368... 28 9.7
>01_06_1357 +
36632992-36633621,36634003-36635136,36635525-36636193,
36636250-36636343,36636378-36636490
Length = 879
Score = 37.5 bits (83), Expect = 0.016
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Query: 181 PLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSE 240
P K +RR+ T+ DS +E P + +QE E + +D A +E
Sbjct: 351 PPKAKTTRRRTKKNTQESDSEGEEEPPKRRGRRTRKSKQEAEQEAAEKEDEVRAASPGTE 410
Query: 241 REDYANEGEDNDGALT---RYGGKDPTCDPPVPICPIGTTKMYNMP 283
A + ED + T G+D D P +C G + +P
Sbjct: 411 DSKRAVQDEDGEAEATGSDSEDGEDSPYDWPPLVCCFGAPRWEFVP 456
>12_01_0419 - 3316866-3318172,3318249-3318360
Length = 472
Score = 32.7 bits (71), Expect = 0.45
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 205 EVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKS-EREDYANEGEDNDGALTRYGGK 261
E P+ + V P +E P+ +P K +S + EDY+ GE+ DGA R GG+
Sbjct: 367 ETPAEEQAPVQEPPAADETPAAG--EPEEQPKPRSSDSEDYSTSGEEGDGA-NRGGGR 421
>11_05_0089 + 18975637-18977439
Length = 600
Score = 32.3 bits (70), Expect = 0.60
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 178 EAVPLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKG 237
+ P ++L R G H D S R+ + +++ P R P D + + S
Sbjct: 143 QPAPDGVELDLRLGRPSLCHRDYSLRRRSAAAIDEDARPRRWRTMPPEDILFESPS---- 198
Query: 238 KSEREDYANEGEDNDGALTRYGGKDP 263
S ED+A++ ED+D L+ G KDP
Sbjct: 199 -SGEEDHADD-EDDDDVLSDDGKKDP 222
>07_03_0908 +
22507565-22507810,22507925-22508872,22509314-22510337,
22510425-22510477
Length = 756
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 305 PLGYNLNPVHLVCMPAADAGCAQWIPPSHCIFEGMYA 341
PL L PVH V PAAD AQ P H + YA
Sbjct: 24 PLVRTLRPVHAVIDPAADPRSAQLSWPGHVVLLPPYA 60
>07_01_0985 -
8297560-8297610,8297728-8297939,8298327-8298449,
8298763-8298817,8299940-8300077,8300187-8300261,
8300339-8300398,8301335-8301392,8301948-8302054,
8302484-8302558,8302643-8302838,8304222-8304301,
8308887-8309757,8310672-8310679
Length = 702
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 197 HHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDYANEGEDND 252
+H ++ Q VPST N++ P + HP D P + K ++ +D+D
Sbjct: 156 NHLENSIQPVPSTQNESTTHP-ESTSHPDDEATSPIKKSAKKVVKKCAKRRSQDDD 210
>06_03_1268 + 28862095-28862231,28862651-28862753,28862901-28863050
Length = 129
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 214 VVPPRQEEEHPSDNVKDPASTAKGKSEREDYANEGEDND 252
V+P ++++ P+ + D +G+ ER +Y +EG + D
Sbjct: 75 VIPTMEDDDDPNYHGTDFVGVGEGEDERNEYTDEGNNVD 113
>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
Length = 171
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Query: 172 IEDGKLEAVPLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDP 231
+ K E VP D E D A + D+ +EE + D DP
Sbjct: 53 LSKSKTETVPENKDDGESDDDNDEEGDDEDAENQ--GDDDAGDEDASEEEGNDEDEDGDP 110
Query: 232 ASTAKGKSEREDYANEGEDND 252
+ +G S+ +D + +D D
Sbjct: 111 EANGEGGSDDDDGGEDDDDED 131
>09_03_0040 + 11816056-11819069,11819837-11820428
Length = 1201
Score = 29.9 bits (64), Expect = 3.2
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Query: 186 LSRRQGSTPTEHHDSSARQEV-PSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDY 244
L ++ G E D++ R+EV P + + E+ +D ++ S+ E
Sbjct: 592 LKKKFGRPRKELKDTTPREEVSPEVASCKAIKHEAIEDKEDSYFEDEGNSKASYSDVEGN 651
Query: 245 ANEGEDNDGALTRYGGKDPTCDPPVPICPIGT 276
+ E AL GGK C P P GT
Sbjct: 652 SKELVRGGKALVVCGGKKELCVTLPPSAPFGT 683
>09_01_0029 -
490433-490591,490930-491019,491860-492608,492996-493047,
493175-493276,493363-493494,493882-494109,494172-494321
Length = 553
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 204 QEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDYANEGEDNDGALTRYGGKDP 263
+EV T+ + + + D ++ +G+ + +++ +E +DNDGA T G+
Sbjct: 222 EEVEDTEEDEYIDEDGDSDDDEDEGEEDDDD-EGEEDDDEHRSENDDNDGAETGRSGEQA 280
Query: 264 TCDPPVPIC 272
V C
Sbjct: 281 DAATDVTCC 289
>05_07_0233 +
28559786-28559861,28560007-28560230,28560345-28560390,
28560571-28560602,28560713-28560755,28560840-28560907,
28561532-28561576,28561640-28561708,28561901-28562113
Length = 271
Score = 29.9 bits (64), Expect = 3.2
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Query: 198 HDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSERE--DYANEGEDNDGAL 255
H S QE PST K + E +++V DP KS E + GE D
Sbjct: 120 HSSKITQENPSTVTKCMDDDSGRPEPETESV-DPVVPRHPKSYMEIMEMIQRGERPDDI- 177
Query: 256 TRYGGKDPTCDPPVPICPIGTTKMYNMPDP 285
+D DPP P PI ++M P P
Sbjct: 178 -----QDINDDPPNPYQPISESRMAPKPKP 202
>03_02_0853 + 11786022-11786105,11786509-11786592,11786915-11787925
Length = 392
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 77 IKWINSHSIVRTTLRIVMSIIEKAVKSLCSYFMYICSSKTDKSWGGWFVDCQDCHN 132
+ W S S + T R +E+ + C YF ++CS G V C CH+
Sbjct: 53 LPWQLSTSRRKKTTRQYRGSMEEEPSATCRYFCHMCSLIVRPEMGIEEVKCPHCHS 108
>01_06_1577 -
38379951-38380167,38380349-38380543,38380919-38381191,
38381281-38381455,38381925-38382035,38382120-38382390,
38382990-38383139,38383242-38384246
Length = 798
Score = 29.9 bits (64), Expect = 3.2
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 192 STPTEHHDSSARQ-EVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDYANEGED 250
+ P+E S E P ++ PP+++EE KD A GK+E+ +G+
Sbjct: 96 TVPSEEEKFSENTVEKPVESSEEKAPPKEKEES-----KDTFDDANGKTEQSSAKEDGDS 150
Query: 251 NDGALTRYGGKD 262
G+ G K+
Sbjct: 151 ESGSGQSDGSKN 162
>05_07_0112 - 27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 208 STDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDYANE---GEDNDGA 254
S DN P + ++ DN +D G+ + EDY E EDND A
Sbjct: 1768 SRDNSGSSPLQMMDDGSDDNEEDAEGDEDGEEDGEDYDAEQHVDEDNDDA 1817
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 29.5 bits (63), Expect = 4.2
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 172 IEDGKLEAVPLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVP--PRQEEEHPSDNVK 229
I DG + P ++D S G+T H + + D+KN + P SD+V
Sbjct: 231 IPDGTKPSSPTELDQSGNTGTTEYLHAGTE------NIDDKNAIQSQPLDSILASSDDVN 284
Query: 230 DPASTAKGKSEREDYANEGEDND 252
+ KG +R + ++ E+ D
Sbjct: 285 EAVKIVKGADDRNEISSSHENTD 307
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 178 EAVPLKMDLSRRQGSTPTEHHDSS-ARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAK 236
E+ P R S P E S+ A+QE S D +N +++ HP + ++ S
Sbjct: 676 ESDPQPSAKEREGSSVPFEREGSNLAKQEKDSDDERNRARKYRKKHHPESDEENYDSEES 735
Query: 237 GKSEREDYANE 247
K R+ + +E
Sbjct: 736 YKHSRKKHRSE 746
>01_04_0120 +
16242220-16242483,16242538-16243424,16244604-16245264,
16245582-16245943,16246071-16246140,16246666-16246740
Length = 772
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 250 DNDGALTRYGGKDPTCDPPVPICPIGTTKM 279
+N A+T GGK TCDPP P P GT M
Sbjct: 206 ENVKAITTRGGKS-TCDPPYP-NPAGTNGM 233
>01_01_0556 +
4090432-4090500,4091414-4092030,4092408-4092533,
4092619-4092895,4093021-4093251
Length = 439
Score = 29.5 bits (63), Expect = 4.2
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 236 KGKSEREDYANEGEDNDGALTRYGGKDPTCDPPVPICPIGTTKMYNMPD----PADCRYY 291
K +S++ GEDN G L K+ T +C I +K N D P + ++
Sbjct: 329 KFQSKKFQDGEAGEDNGGVLAAGTDKERTISAEDAVCCICLSKFSNNEDLRELPCNHVFH 388
Query: 292 YVCTPKGM-FRRMCPL 306
C K + +CPL
Sbjct: 389 LECVDKWLKINALCPL 404
>12_02_0603 - 20915447-20915920
Length = 157
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 223 HPSDNVKDPASTAKGKSEREDYA--NEGEDN 251
HPSD+V + + GK + ED+A N GE N
Sbjct: 96 HPSDSVDELKVASNGKKDVEDHAKGNHGEKN 126
>08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,
4381944-4382047,4382127-4382259,4384477-4384653,
4385164-4385309,4385536-4385625,4385703-4385915,
4386090-4386182,4386743-4386937,4387018-4387110,
4387924-4388019,4388556-4388985,4389424-4390091,
4392074-4392271,4392690-4393407,4394036-4394181
Length = 1628
Score = 29.1 bits (62), Expect = 5.6
Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 4/97 (4%)
Query: 181 PLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSE 240
P + S S PT H + PS+ + + Q H NV+ + S
Sbjct: 1345 PTSHEFSNMPSSQPTSHEFLNMPSSQPSSHEFSNIKSSQTTSHEFSNVQTSQLASHEFSN 1404
Query: 241 REDYANEGEDNDGALTRYGGKD----PTCDPPVPICP 273
D N +T+ G + P P +P+ P
Sbjct: 1405 PSDLEENPTANAAFMTQPKGSEHIPTPFAQPSMPVSP 1441
>06_01_0983 -
7630651-7630683,7630717-7630942,7630993-7631234,
7631502-7631591,7631680-7631845,7632225-7633191,
7633402-7633591,7633908-7634048,7634416-7634736
Length = 791
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 181 PLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKS- 239
P KM +++++ + T+ +V S+D+++ V +EE D +D + G S
Sbjct: 194 PRKMRMNQKKLAQRTKRVQQDEDLDVTSSDDEDFVA---DEEEVEDTKEDEYTDEDGDSD 250
Query: 240 EREDYANEGEDNDG 253
+ ED E +D++G
Sbjct: 251 DDEDEGEEDDDDEG 264
>04_04_0175 - 23307507-23308688,23308962-23309647,23310662-23310680
Length = 628
Score = 29.1 bits (62), Expect = 5.6
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 173 EDGKLEAVPLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPA 232
ED L++V ++ Q S E D + ++ S + K V R E+ SD++ DP
Sbjct: 353 EDSTLDSVVENSSMTDVQAS---EEKDEARSDDILSDERKIPVDQRSPVEN-SDSLSDPV 408
Query: 233 STAKGKSEREDYANE 247
A +E + NE
Sbjct: 409 DRALSSTETDGARNE 423
>03_06_0253 -
32666152-32666360,32666443-32666632,32666764-32666862,
32666999-32667094,32667408-32668361,32668683-32668901,
32669282-32669491,32669617-32669879,32670041-32671717,
32672702-32672852
Length = 1355
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 259 GGKDPTCDPPVPICPIGTTKMYN 281
GG P C P +P+ +G K YN
Sbjct: 900 GGISPDCSPVLPVAIVGALKKYN 922
>07_01_0166 +
1164903-1165144,1165839-1166074,1166719-1166781,
1166808-1167017,1167098-1167263,1167537-1167780,
1167970-1168362
Length = 517
Score = 28.7 bits (61), Expect = 7.4
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 208 STDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDYANEGEDNDGALTR 257
++ ++NV PR E+ P + +P+ A G E + EGE+ L R
Sbjct: 2 ASSSENVEAPRDEQRDPPPSPPNPSEEA-GAGEEMEAEGEGEEEVKTLER 50
>02_04_0324 + 22032748-22032895,22035274-22035593,22035709-22036797
Length = 518
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 302 RMCPLGYNLNPVHLVCMPAADAGCAQWIPPSHCI 335
R P GY + V +VCM AA C W+P S +
Sbjct: 387 RAMPRGYAVAMVAVVCMYAAGL-CVSWVPLSSVV 419
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 28.3 bits (60), Expect = 9.7
Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Query: 188 RRQGSTPTEHHDSSARQEVPSTDNKNVVPP-RQEEEHPSDNVKDPASTAKGKSEREDYAN 246
R S T R+E D + VV ++ SD V D + + DYA+
Sbjct: 4 RGASSASTSRGRRRPREEEEEEDEEEVVGDVASDDSADSDFVAD-TEEEEAADDEYDYAS 62
Query: 247 EGEDNDGALTRYGGKDPTCDPPVP 270
+G+D G PP P
Sbjct: 63 DGKDGAGPAAAAAAAPAAVAPPPP 86
>06_03_1186 -
28260487-28262112,28262205-28262345,28262429-28262573,
28262964-28263067,28263324-28263456,28263904-28264013,
28265144-28265167
Length = 760
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/79 (22%), Positives = 28/79 (35%)
Query: 185 DLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDY 244
D S+R T+H S +K PP + + S+ S R
Sbjct: 502 DYSKRAIPEQTDHLSDKDPLRPVSVRSKYAKPPAPAAVYDEAPANEKVSSRTPSSHRRHT 561
Query: 245 ANEGEDNDGALTRYGGKDP 263
+ + NDG+ R G + P
Sbjct: 562 SRQNAVNDGSARRDGSRQP 580
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 208 STDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDYANEGEDNDGALTRYGGKDPTCD 266
S+++++V P + E P +N K AS + + E Y ++++ T +P D
Sbjct: 871 SSESQDVAPAKVATEQPLENQKAAASEQPLEPQHEAYEENPQEHNSDATAKESSEPERD 929
>05_07_0310 +
29135875-29136052,29136206-29136617,29136723-29136867,
29137944-29138102,29138183-29138242,29138349-29138546
Length = 383
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/61 (29%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 199 DSSARQEVPSTDNKNVVPPRQEEEH-PSDNVKDPASTAKGKSEREDYANEGEDNDGALTR 257
D QEV N P E+E P D + K E E+ E ED + L
Sbjct: 192 DEGLAQEVAEAVNTEEAPATAEDEKKPEDVPQSEVDKDKESPENEEEEKEPEDKEMTLEE 251
Query: 258 Y 258
Y
Sbjct: 252 Y 252
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.135 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,273,366
Number of Sequences: 37544
Number of extensions: 488648
Number of successful extensions: 1475
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1458
Number of HSP's gapped (non-prelim): 36
length of query: 351
length of database: 14,793,348
effective HSP length: 83
effective length of query: 268
effective length of database: 11,677,196
effective search space: 3129488528
effective search space used: 3129488528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -