Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001361-TA|BGIBMGA001361-PA|IPR002557|Chitin binding
Peritrophin-A
(351 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.086
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 34 0.15
SB_50178| Best HMM Match : F5_F8_type_C (HMM E-Value=0.6) 34 0.20
SB_33629| Best HMM Match : Extensin_2 (HMM E-Value=2.2) 34 0.20
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 33 0.35
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 32 0.80
SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.80
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2) 31 1.4
SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17) 31 1.4
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 31 1.9
SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35) 30 2.5
SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20) 30 2.5
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_49055| Best HMM Match : Glyco_transf_54 (HMM E-Value=1.4e-14) 30 2.5
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 30 2.5
SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.2
SB_3069| Best HMM Match : zf-C2H2 (HMM E-Value=1e-06) 30 3.2
SB_58407| Best HMM Match : TNFR_c6 (HMM E-Value=3.5e-05) 30 3.2
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 30 3.2
SB_15832| Best HMM Match : zf-C2H2 (HMM E-Value=7e-35) 30 3.2
SB_20537| Best HMM Match : Vicilin_N (HMM E-Value=2.6) 29 4.3
SB_46039| Best HMM Match : Ribosomal_L29 (HMM E-Value=0.23) 29 4.3
SB_12548| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 29 4.3
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 29 4.3
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 4.3
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 5.7
SB_41641| Best HMM Match : PT (HMM E-Value=3.1) 29 5.7
SB_54829| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_18985| Best HMM Match : TUDOR (HMM E-Value=8.3e-37) 29 7.5
SB_1049| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_653| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.2) 29 7.5
SB_56776| Best HMM Match : CRA_rpt (HMM E-Value=5.6e-17) 28 9.9
SB_39714| Best HMM Match : Lipin_N (HMM E-Value=0) 28 9.9
SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_7325| Best HMM Match : SNF2_N (HMM E-Value=8.9e-32) 28 9.9
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 35.1 bits (77), Expect = 0.086
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 284 DPADCRYYYVCTPKGMFRRMCPLGYNLNPVHLVCMPAADAGC 325
DP DC YY C F++ CP G N + C + C
Sbjct: 238 DPKDCSAYYQCKKGRSFKKFCPDGLKFNALIKSCDEPSKVNC 279
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 34.3 bits (75), Expect = 0.15
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 285 PADCRYYYVCTPKGMFRRMCPLGYNLNPVHLVCMPAADAGCAQ 327
P +C+ Y C+ K + R CP G N N C +A C +
Sbjct: 73 PENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPCEE 115
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 3 HPYDTRRYFKCNNSVMREMACQNGYKFNPNTLRCESTK 40
HP + + Y C+N + E C G +N C+ K
Sbjct: 72 HPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPK 109
>SB_50178| Best HMM Match : F5_F8_type_C (HMM E-Value=0.6)
Length = 497
Score = 33.9 bits (74), Expect = 0.20
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Query: 185 DLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDY 244
D + STP E D + E P ++ P E+ P D D ST + + +
Sbjct: 344 DGQETEDSTPEEPDDEDSTPEEPDDEDSTPEEPDDEDSTPED-PDDEDSTPEEPDDEDST 402
Query: 245 ANEGEDNDGALTRYGGKDPTCDPP 268
E +D D +D T + P
Sbjct: 403 PEEPDDEDSTPEEPDDEDSTPEEP 426
>SB_33629| Best HMM Match : Extensin_2 (HMM E-Value=2.2)
Length = 958
Score = 33.9 bits (74), Expect = 0.20
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 187 SRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDYAN 246
S+ Q TP HD + Q + D+K +P + D V + A KG +E
Sbjct: 537 SQAQEHTPKWEHDDQS-QALKKIDDKAALPAESGQSQFQDVVIERAVKDKGDYLQEKAHK 595
Query: 247 EGEDNDGALTRYGGKD 262
GE + GGKD
Sbjct: 596 HGEQEEDVAKHAGGKD 611
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 188 RRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDYAN 246
+R GST TE + + A + + D +VP + E +P ++D + +G + + Y N
Sbjct: 174 KRNGSTLTEANHNEAYECMEMNDYDYIVPRQNEYNNPDGPIQDQYNNPEGPIQ-DQYNN 231
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 33.1 bits (72), Expect = 0.35
Identities = 15/48 (31%), Positives = 19/48 (39%)
Query: 281 NMPDPADCRYYYVCTPKGMFRRMCPLGYNLNPVHLVCMPAADAGCAQW 328
N P P C+ Y C+ + CP G N N C +A C W
Sbjct: 93 NYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPCEGW 140
Score = 32.3 bits (70), Expect = 0.61
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 2 PHPYDTRRYFKCNNSVMREMACQNGYKFNPNTLRCE 37
PHP + Y C+N + EM C G +N C+
Sbjct: 95 PHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCD 130
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 31.9 bits (69), Expect = 0.80
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 3 HPYDTRRYFKCNNSVMREMACQNGYKFNPNTLRCE 37
HP Y C+N + EM C G +N T C+
Sbjct: 346 HPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKECD 380
>SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 31.9 bits (69), Expect = 0.80
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 175 GKLEA-VPLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQ 219
GK++ VP+ + SR + EH+D A+ EV D+K+ V P +
Sbjct: 236 GKVDQDVPIVVQDSRGKREAVLEHNDGKAKDEVSKNDSKDEVKPTE 281
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 31.5 bits (68), Expect = 1.1
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 187 SRRQGSTPT-EHHDSSARQEVPSTDNKNVVPPRQEEEHPS-----DNVKDPASTAKGKSE 240
S+ + TP E +SSA +++ D +NV+P E+ S ++ D + +A +
Sbjct: 535 SQVKSKTPRREDAESSASRDI---DRRNVIPTEVFEDEGSASSGKEDDMDGSGSASESGD 591
Query: 241 REDYANEGEDNDGALTRYGGKDPT 264
+D N GE +G G+D T
Sbjct: 592 SDDSGNSGESGEGEPDEGDGEDQT 615
>SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2)
Length = 2527
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 191 GSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDYANEGED 250
G + TE + S QE+ ST ++ + ++ +D+V++ + +G S+ ++ D
Sbjct: 594 GKSNTEDDEESENQELDSTRTSGLLESLTDNDYDADSVRENTLSPRGSSQGSIASSNSAD 653
Query: 251 ND 252
D
Sbjct: 654 MD 655
>SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17)
Length = 1440
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/100 (19%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Query: 177 LEAVPLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPS---DNVKDPAS 233
+++ P+ L +R+G+ P + + + D+ + P Q+E S +++P +
Sbjct: 1033 IDSAPMNPPLRQRRGALPPPGIPLTPPENLDKKDDDDAPPAPQDESTSSRAVPRIEEPVN 1092
Query: 234 TAKGKSEREDYANEGEDNDGALTRYGGKDPTCDPPVPICP 273
+ + +E+ E E +P PP P P
Sbjct: 1093 EPEVEDPQEEADTETETEPETAEEVESDEPLPPPPPPPIP 1132
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 30.7 bits (66), Expect = 1.9
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 10/98 (10%)
Query: 224 PSDNVKDPASTAKGKSEREDYANEGEDNDGALTRYGGKDPTCDPPVPICPIGT----TKM 279
PS+ DPA KG+ E D + G+ ++ + K PT PP P P K
Sbjct: 549 PSNLRYDPA---KGRCEWADTVDCGQRP--TISPHPPK-PTTMPPQPTPPKSPFCEEKKN 602
Query: 280 YNMPDPADCRYYYVCTPKGMFRRMCPLGYNLNPVHLVC 317
+ DP++C + C+ ++R CP + L C
Sbjct: 603 GDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKLEC 640
Score = 30.3 bits (65), Expect = 2.5
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 10 YFKCNNSVMREMACQNGYKFNPNTLRCES 38
+ C+N + M C +FNP T C++
Sbjct: 460 FISCSNHITYHMPCPENLRFNPTTKHCDN 488
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 30.7 bits (66), Expect = 1.9
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 173 EDGKLEAVPLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPA 232
++ K +A K ++G+T + +E S + ++ +EE+ ++ ++
Sbjct: 961 QEDKTDAEKEKKKPKAKRGATKKKEE-----KEQKSEEEEDQAKSSSQEENVGESQEE-- 1013
Query: 233 STAKGKSEREDYANEGEDNDGA-LTRYGGKDPTCDPPVPICPIGT-TKMYNMPDP 285
S AK + E A+EG +D A +T D T PPV P GT K ++P P
Sbjct: 1014 SAAKNQDEVVPDADEGGPDDKAPVTPKASDDTTQKPPVD-TPSGTEAKQLDLPHP 1067
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/77 (19%), Positives = 35/77 (45%)
Query: 195 TEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDYANEGEDNDGA 254
++H++S ++ D N ++E+ D+ D S + + D ++G+D+D
Sbjct: 336 SDHNNSCDDEDYDDDDVHNDDSENDDDENDDDDDDDDISREDNEEKESDGDDDGDDDDDN 395
Query: 255 LTRYGGKDPTCDPPVPI 271
G++ + P P+
Sbjct: 396 DDDVDGREAARETPRPV 412
>SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35)
Length = 916
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 183 KMDLSRRQGSTPTEHHDSSARQEVPSTDNKNV----VPPRQEEEHPSDNVKDPASTAKGK 238
KM R E + + D+K V V E P D ++ + +
Sbjct: 181 KMGQKERHSEDEEEKENKDDSKSADKDDDKGVDEKGVDEEGASEEPQDGEEEEEEEEEEE 240
Query: 239 SEREDYANEGEDNDGALTR 257
SE E+ E ED +G L +
Sbjct: 241 SEEEEEEEEDEDGEGVLVK 259
>SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)
Length = 1803
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 278 KMYNMPDPADCRYYYVCTPKGMFR-RMCPLGYNLNPVHLVC 317
K ++ DP DC YY C R R CP G N V+ C
Sbjct: 1495 KCHDFADPKDCSKYYHCDGYDDGRLRSCPTGQLWNHVNKKC 1535
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 278 KMYNMPDPADCRYYYVCTPKGMFR-RMCPLGYNLNPVHLVC 317
K ++ DP DC YY C R R CP G N V+ C
Sbjct: 71 KCHDFADPRDCFKYYHCDGYDDVRWRSCPTGQLWNHVNKKC 111
>SB_49055| Best HMM Match : Glyco_transf_54 (HMM E-Value=1.4e-14)
Length = 471
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/75 (18%), Positives = 33/75 (44%)
Query: 184 MDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSERED 243
+++ + ST E + D+ N++P + ++P +V++P +S+ +
Sbjct: 7 IEIQSPETSTAIETYSGCILTNTQRQDSPNLLPHESQVKNPEKSVREPIKPQVDQSKHDA 66
Query: 244 YANEGEDNDGALTRY 258
DN+G L +
Sbjct: 67 RRPSHADNNGKLANH 81
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 213 NVVPPRQEEEHPSDNVKDPASTAKGKSEREDYANEGEDNDGA 254
N + P++E+ +N KDP + G+ R + NE DN+GA
Sbjct: 27 NELKPKKEKHEVEENEKDPNT---GEFLRSESPNEDNDNNGA 65
>SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 29.9 bits (64), Expect = 3.2
Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 3/125 (2%)
Query: 129 DCHNRPKNGMSENDMSNALAQGMSIGIKMXXXXXXXXXXXXXXIEDGKLEAVPLKMDLSR 188
+ HN+PK G N S +G S + K + + SR
Sbjct: 583 EAHNKPKGGTQHNIESQNNPKGGSHRSESNSKTKRGPKRIEESQSKPKRDTEGKEQSQSR 642
Query: 189 RQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPAS-TAKGKSEREDYANE 247
+G TE D S ++ T K + +Q+++ N + P S + S+++D N
Sbjct: 643 PKGD--TEGKDESQQKPKGDTGGKEELLDKQKQKEEKQNKQGPRSPRRRPDSQQKDLNNS 700
Query: 248 GEDND 252
+D
Sbjct: 701 QRKHD 705
>SB_3069| Best HMM Match : zf-C2H2 (HMM E-Value=1e-06)
Length = 625
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/56 (32%), Positives = 23/56 (41%)
Query: 182 LKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKG 237
LK D R + S+ S PS +K V PS ++K PAST G
Sbjct: 36 LKEDSGRDKQSSFKNSSGPSTDSAPPSNQSKTTVNTNSFAHSPSSDIKSPASTMGG 91
>SB_58407| Best HMM Match : TNFR_c6 (HMM E-Value=3.5e-05)
Length = 511
Score = 29.9 bits (64), Expect = 3.2
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 212 KNVVPPRQEEEHPSDNVKDPASTAKGKSEREDYANEGEDNDGALTRYGGKDPTCDP--PV 269
++V+P Q P+++V++P ST G SER + ++ E + G + PT P V
Sbjct: 363 EDVLPANQ----PNEDVEEPGSTMPGCSERSETSSVTE----IVENQGNESPTASPIGSV 414
Query: 270 PICPI-GTTKMY-NMPDPADCRYYYV 293
P+ I G +Y + D D +Y ++
Sbjct: 415 PLEYIKGCLPLYQKVCDKLDLKYRFM 440
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 185 DLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSE 240
D RR+ S E RQ+ + + +V PPR+ + +N P +KGK E
Sbjct: 232 DSQRRERSPVPERRQERRRQD---SSSPSVSPPRRSKGRREENSVSPPRRSKGKRE 284
>SB_15832| Best HMM Match : zf-C2H2 (HMM E-Value=7e-35)
Length = 337
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/56 (32%), Positives = 23/56 (41%)
Query: 182 LKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKG 237
LK D R + S+ S PS +K V PS ++K PAST G
Sbjct: 179 LKEDSGRDKQSSFKNSSGPSTDSAPPSNQSKTTVNTNSFAHSPSSDIKSPASTMGG 234
>SB_20537| Best HMM Match : Vicilin_N (HMM E-Value=2.6)
Length = 624
Score = 29.5 bits (63), Expect = 4.3
Identities = 17/75 (22%), Positives = 33/75 (44%)
Query: 172 IEDGKLEAVPLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDP 231
+++ A +K D+ + + TE H +S + +T K+ +P RQE+ +
Sbjct: 402 LQETDTRAHNIKEDMVTYEENQQTEEHKASEVTDEDTTPKKSSLPQRQEQLSEQKTLGSM 461
Query: 232 ASTAKGKSEREDYAN 246
K + E +AN
Sbjct: 462 TKEESLKEDHEVHAN 476
>SB_46039| Best HMM Match : Ribosomal_L29 (HMM E-Value=0.23)
Length = 186
Score = 29.5 bits (63), Expect = 4.3
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 172 IEDGKLEAVPLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDP 231
IED K E + L + + + T+ HD ++ D K V QE P DNV++P
Sbjct: 23 IEDLKKENLQLTQEQAEQIKVLETQLHDLKELRK----DLKTVTETEQEPIEPIDNVREP 78
Query: 232 ASTAK 236
+ + +
Sbjct: 79 SGSVR 83
>SB_12548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 29.5 bits (63), Expect = 4.3
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 198 HDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDYANEGEDNDGALTR 257
+++ + Q + V P EE P + PA +G +AN+G D D L +
Sbjct: 193 NETLSDQGFSEVSSPEVRSPEPEETPPEPEIIIPAPDFEG------FANDGYDTDEELDK 246
Query: 258 YGGKD--PTCDP--PVPICPIGTTKM 279
Y G++ P +P VPI P T++
Sbjct: 247 YLGENEAPAKNPVSEVPIIPKTKTRV 272
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 9 RYFKCNNSVMREMACQNGYKFNPNTLRCESTKYRIIK 45
++ C N V E C G FNP CE R K
Sbjct: 23 KFVICYNGVREERECAKGLVFNPKEKICEQPDQRYTK 59
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/67 (22%), Positives = 27/67 (40%)
Query: 185 DLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDY 244
D S S P + +++ + +TDN N + +P + D ++T S+
Sbjct: 136 DNSNSDDSKPDNSNTNNSNSDNSNTDNSNSDNSTSDNSNPDNLTSDNSNTDNSGSDNSSS 195
Query: 245 ANEGEDN 251
N DN
Sbjct: 196 GNFNSDN 202
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 182 LKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSER 241
L+ DL + ++ D+ V N ++ + H N+ D ++ + SE+
Sbjct: 631 LRHDLHNKNYDDGDDNIDNDGDVNVNDDSRHNYHYTQKSKHHHEKNIDD-SNEKQSTSEK 689
Query: 242 EDYANEGEDND 252
+ +++ G+DND
Sbjct: 690 DKFSDNGDDND 700
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 29.1 bits (62), Expect = 5.7
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Query: 195 TEHHDSSARQE---VPSTDNKNVVPPRQEE-EHPSDNVKDPASTAKGKSER-EDYANEGE 249
TE H + A ++ V +TD ++ +QEE H SD K ST+K K+ER E + +GE
Sbjct: 920 TERHRTIALKKGNVVGATDK--IMSDKQEEVAHISDG-KRTTSTSKAKAERIEKLSVDGE 976
Query: 250 DNDGA 254
D+ A
Sbjct: 977 DDKSA 981
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 29.1 bits (62), Expect = 5.7
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 188 RRQGSTPTEHHDSSA----RQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSERED 243
R++G PT + R P ++ K+ +E+E D KD +K ++E+
Sbjct: 512 RKRGRPPTRSNSKKQPPRKRGRKPKSEKKDTEEGNKEKEKGDDKAKDKTEESKDGEKKEE 571
Query: 244 YANEGEDND 252
++ D +
Sbjct: 572 IGDKKSDKE 580
>SB_41641| Best HMM Match : PT (HMM E-Value=3.1)
Length = 873
Score = 29.1 bits (62), Expect = 5.7
Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 4/106 (3%)
Query: 178 EAVPLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKG 237
EA P K + G+ PT+ + + P+ + V E P+ +DP A+
Sbjct: 619 EAEPTKRPQAPVGGAVPTKRPQAPVGEAEPTKRPQVSVG----EAEPTKRPQDPNGQAEP 674
Query: 238 KSEREDYANEGEDNDGALTRYGGKDPTCDPPVPICPIGTTKMYNMP 283
+ E E + G +PT P VP+ TK +P
Sbjct: 675 TKRPQVPVGEAEPTKRPQSPVGEAEPTKRPQVPVGEAKPTKRPQVP 720
>SB_54829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 58
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 194 PTEHHDSSARQEVPSTDNKNVVPPRQEEEH 223
PT H +++EV S KN++P +E H
Sbjct: 27 PTTRHPKRSQREVVSGPRKNIIPVAREPTH 56
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 28.7 bits (61), Expect = 7.5
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 185 DLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEE---HPSDNVKDPASTAKGKSER 241
D+S R+ S ++ ++E+P TD ++VV EEE S+ + ++ K R
Sbjct: 3066 DVSEREKSLERSAENTPEKEEIP-TDEESVVEDLPEEELTLEESEGESEASTPRLSKQTR 3124
Query: 242 EDYANE 247
E A+E
Sbjct: 3125 EVMASE 3130
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 271 ICPIGTTKMYNMPDPADCRYYYVCTPKGMFRRMCPLGY 308
ICP G C Y Y C P F ++C LG+
Sbjct: 3032 ICPGGHYCPNGSDTYTPCEYPYYCPPGSGFPKLCDLGH 3069
>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1169
Score = 28.7 bits (61), Expect = 7.5
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 14/70 (20%)
Query: 272 CPIGTTKMYNMPDPADCRYYYVCTPKGMFRRMCPLGY--NLNPVHLVCMPAADAGCAQWI 329
CPIGT P C Y C P+ CP+G+ N + +H + C +
Sbjct: 987 CPIGTVT------PKTCPLGYYCPPESSDPEPCPIGHFSNSSGLHYI------ENCTKCT 1034
Query: 330 PPSHCIFEGM 339
P +C +G+
Sbjct: 1035 PGWYCDAQGL 1044
>SB_18985| Best HMM Match : TUDOR (HMM E-Value=8.3e-37)
Length = 1219
Score = 28.7 bits (61), Expect = 7.5
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 8/107 (7%)
Query: 172 IEDGKLEAVPLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDP 231
+ DGK E + D S T D E+ DN PP EE+ P N + P
Sbjct: 248 LSDGKTE----EQDTFSEGVSDTTRSVDDGPEVEIEE-DNDEKPPPEIEEQKPEANNEKP 302
Query: 232 ASTAKGKSEREDYANEGEDNDGALTRYGGKDPTCDPPVPICPIGTTK 278
+T ++ + + + D A +R K P V I + T+
Sbjct: 303 TNTDVPEATKPENKQQTSGIDVAKSR---KSEVPQPEVSIPEVSQTE 346
>SB_1049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 28.7 bits (61), Expect = 7.5
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 221 EEHPSDNVKDPASTAKGKSEREDYANEGEDNDGALTRYGGKDPTCD 266
E P D T +G S+ +DY NE + D AL G+ CD
Sbjct: 128 ERQPGDGCFSDI-TEEGDSDLDDYGNEDIEEDEALDNLEGEYFDCD 172
>SB_653| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.2)
Length = 835
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 173 EDGKLEAVPLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPP 217
E+ K+ P + S+R+ S PT H SS + + + D K + P
Sbjct: 578 EEHKIAGKPPRPKSSKRRTSKPTTHLPSSKQHDTVNDDTKPIPHP 622
>SB_56776| Best HMM Match : CRA_rpt (HMM E-Value=5.6e-17)
Length = 905
Score = 28.3 bits (60), Expect = 9.9
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Query: 190 QGSTPTEHHD--SSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPAS---TAKGKSEREDY 244
+GS H+ SS QE T + E +P + + S T KG + D
Sbjct: 801 EGSGHASEHEKASSLSQEQGRTKKTGREKSERVETNPEETRRGERSRKGTDKGVKNKSDK 860
Query: 245 ANEGEDNDGALTRYGGKDP 263
A EG+D R +DP
Sbjct: 861 AGEGQDKPTDAVRGESRDP 879
>SB_39714| Best HMM Match : Lipin_N (HMM E-Value=0)
Length = 1311
Score = 28.3 bits (60), Expect = 9.9
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 185 DLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEHPSDNVKDPAST---AKGKSER 241
+L R TPT+ D+ ++ + N PP +E S++ + S A+ KSE
Sbjct: 870 ELDRDNLKTPTKDMDTESQITEEAVTPTNECPPLANQEDKSEDKSEVISVECIARAKSEE 929
Query: 242 EDYANEGE 249
E E +
Sbjct: 930 EQSTEEAK 937
>SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 28.3 bits (60), Expect = 9.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 203 RQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDYAN-EGEDNDGAL 255
RQE +D + +EEE + N+ +K KSERE G+D++G L
Sbjct: 188 RQEDEESDEDDEEDEEEEEEESTQNLLYRDVKSKEKSEREKRKELYGKDDEGEL 241
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 28.3 bits (60), Expect = 9.9
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 177 LEAVPLKMDLSRRQGSTPTEHHDSSARQEVPSTDNKNVVPPRQEEEH-PSDNVKDPASTA 235
L + K+ LSR HH SSA E + + N+VP Q H PS+ K A A
Sbjct: 448 LRGLNKKIVLSRALVVDWAHHHKSSA-DEPQKSKHTNIVPNAQTSTHSPSNESKIKAIEA 506
Query: 236 K 236
K
Sbjct: 507 K 507
>SB_7325| Best HMM Match : SNF2_N (HMM E-Value=8.9e-32)
Length = 884
Score = 28.3 bits (60), Expect = 9.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 203 RQEVPSTDNKNVVPPRQEEEHPSDNVKDPASTAKGKSEREDYAN-EGEDNDGAL 255
RQE +D + +EEE + N+ +K KSERE G+D++G L
Sbjct: 619 RQEDEESDEDDEEDEEEEEEESTQNLLYRDVKSKEKSEREKRKELYGKDDEGEL 672
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.135 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,248,252
Number of Sequences: 59808
Number of extensions: 601838
Number of successful extensions: 1938
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1851
Number of HSP's gapped (non-prelim): 114
length of query: 351
length of database: 16,821,457
effective HSP length: 83
effective length of query: 268
effective length of database: 11,857,393
effective search space: 3177781324
effective search space used: 3177781324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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