GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001357-TA|BGIBMGA001357-PA|undefined
         (295 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2FV56 Cluster: Putative uncharacterized protein; n=2; ...    35   2.9  
UniRef50_A7RXM7 Cluster: Predicted protein; n=1; Nematostella ve...    33   8.8  

>UniRef50_A2FV56 Cluster: Putative uncharacterized protein; n=2;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 499

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 6/105 (5%)

Query: 180 DHNRTQKCKTYKIIMNKLD--ELNRVFVQRGRSPPARPPLCPVNFTDKVVTTDVDRSEGL 237
           D +   KCK     +N+LD  E+N + +         P L P+   D  +    DR+  +
Sbjct: 59  DMSTEVKCKKILETINELDSREINFLLLICSDIEKQYPSLIPL--LDSSLIVAADRANTV 116

Query: 238 QKPQIMNQTILNKTGRCSPYGREHIVMRSMTQAYAVDI-APKEVS 281
            K QI+ + I NKT R + Y    I+++ + Q  A DI +  E+S
Sbjct: 117 SKLQILQKYIENKT-RKTEYDFGFIIIQKIKQNIATDIQSSNEIS 160


>UniRef50_A7RXM7 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 491

 Score = 33.1 bits (72), Expect = 8.8
 Identities = 14/52 (26%), Positives = 26/52 (50%)

Query: 100 LMKRQQQPLKEDSSIRDFRVVCEKALLEQQKQLARVTQLCEKLTERQATEIK 151
           + K  +  +K D   R+  +  E+  LE +  +++  Q CEKL E +   +K
Sbjct: 177 IKKGMESAIKSDKDYREMYMKTERTRLEWEATMSKYCQTCEKLEEERVGHLK 228


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.317    0.132    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 279,300,708
Number of Sequences: 1657284
Number of extensions: 9534806
Number of successful extensions: 20233
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 20232
Number of HSP's gapped (non-prelim): 2
length of query: 295
length of database: 575,637,011
effective HSP length: 100
effective length of query: 195
effective length of database: 409,908,611
effective search space: 79932179145
effective search space used: 79932179145
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 72 (33.1 bits)