GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001357-TA|BGIBMGA001357-PA|undefined
         (295 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    27   0.63 
AJ973476-1|CAJ01523.1|  126|Anopheles gambiae hypothetical prote...    25   3.4  
AJ697729-1|CAG26922.1|  126|Anopheles gambiae putative sensory a...    25   3.4  

>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
          protein.
          Length = 182

 Score = 27.1 bits (57), Expect = 0.63
 Identities = 12/20 (60%), Positives = 13/20 (65%)

Query: 27 RPADDVSDAQESDRLIVDAG 46
          RPADD SD + S  L  DAG
Sbjct: 46 RPADDTSDQESSTELSDDAG 65


>AJ973476-1|CAJ01523.1|  126|Anopheles gambiae hypothetical protein
           protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 4/48 (8%)

Query: 231 VDRSEGLQKPQIMNQ--TILNKTGRCSPYGREHIVMRSMTQAYAVDIA 276
           VD  E L+  ++ N     L  TGRC+P G E  + R +  A   D A
Sbjct: 28  VDLDEILKSDRLFNNYYKCLMDTGRCTPDGNE--LKRILPDALKTDCA 73


>AJ697729-1|CAG26922.1|  126|Anopheles gambiae putative sensory
           appendage protein SAP-3 protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 4/48 (8%)

Query: 231 VDRSEGLQKPQIMNQ--TILNKTGRCSPYGREHIVMRSMTQAYAVDIA 276
           VD  E L+  ++ N     L  TGRC+P G E  + R +  A   D A
Sbjct: 28  VDLDEILKSDRLFNNYYKCLMDTGRCTPDGNE--LKRILPDALKTDCA 73


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.132    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,420
Number of Sequences: 2123
Number of extensions: 9528
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 3
length of query: 295
length of database: 516,269
effective HSP length: 64
effective length of query: 231
effective length of database: 380,397
effective search space: 87871707
effective search space used: 87871707
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)