GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001357-TA|BGIBMGA001357-PA|undefined
         (295 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119515-1|AAM50169.1|  494|Drosophila melanogaster GH14048p pro...    29   7.7  
AE014297-2492|AAS65170.1|  462|Drosophila melanogaster CG7131-PB...    29   7.7  
AE014297-2491|AAF55530.2|  494|Drosophila melanogaster CG7131-PA...    29   7.7  

>AY119515-1|AAM50169.1|  494|Drosophila melanogaster GH14048p
           protein.
          Length = 494

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 13/50 (26%), Positives = 22/50 (44%)

Query: 209 RSPPARPPLCPVNFTDKVVTTDVDRSEGLQKPQIMNQTILNKTGRCSPYG 258
           R+PP RP    + F   +      + + + KP +    I+ +T  C P G
Sbjct: 332 RTPPIRPMENGLRFDGPMYAMTTQKHDFVAKPHVRRAPIMPRTAFCRPTG 381


>AE014297-2492|AAS65170.1|  462|Drosophila melanogaster CG7131-PB,
           isoform B protein.
          Length = 462

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 13/50 (26%), Positives = 22/50 (44%)

Query: 209 RSPPARPPLCPVNFTDKVVTTDVDRSEGLQKPQIMNQTILNKTGRCSPYG 258
           R+PP RP    + F   +      + + + KP +    I+ +T  C P G
Sbjct: 300 RTPPIRPMENGLRFDGPMYAMTTQKHDFVAKPHVRRAPIMPRTAFCRPTG 349


>AE014297-2491|AAF55530.2|  494|Drosophila melanogaster CG7131-PA,
           isoform A protein.
          Length = 494

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 13/50 (26%), Positives = 22/50 (44%)

Query: 209 RSPPARPPLCPVNFTDKVVTTDVDRSEGLQKPQIMNQTILNKTGRCSPYG 258
           R+PP RP    + F   +      + + + KP +    I+ +T  C P G
Sbjct: 332 RTPPIRPMENGLRFDGPMYAMTTQKHDFVAKPHVRRAPIMPRTAFCRPTG 381


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.132    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,162,842
Number of Sequences: 52641
Number of extensions: 482037
Number of successful extensions: 1042
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1039
Number of HSP's gapped (non-prelim): 3
length of query: 295
length of database: 24,830,863
effective HSP length: 84
effective length of query: 211
effective length of database: 20,409,019
effective search space: 4306303009
effective search space used: 4306303009
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)