Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001356-TA|BGIBMGA001356-PA|undefined
(144 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55374-6|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 33 0.060
U55374-5|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 33 0.060
U55374-4|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 33 0.060
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 33 0.060
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 31 0.24
AC006712-7|AAK39318.2| 264|Caenorhabditis elegans Hypothetical ... 29 1.3
Z81497-1|CAB04077.1| 1081|Caenorhabditis elegans Hypothetical pr... 28 2.3
L13200-7|AAA28189.1| 206|Caenorhabditis elegans Prion-like-(q/n... 28 3.0
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 27 5.2
Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical pr... 27 5.2
U97013-6|AAB52337.1| 221|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81509-5|CAI79166.1| 150|Caenorhabditis elegans Hypothetical pr... 26 9.1
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 26 9.1
>U55374-6|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 33.5 bits (73), Expect = 0.060
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 27 RSHYEEYSYSSNGECRQXXXXXXXXXXVVSPPHHYHEPYYEKPDRSESYQQMPQPRSEVW 86
R ++ +S+S + +Q + P H YY RS Y ++P P +++
Sbjct: 176 RDYHTSHSHSHHPTSQQQQHQPMYSTSPLISPRSSHS-YYTP--RSSQYYEIPSPSPDIY 232
Query: 87 EQDRCSAREREYPSAVM 103
R SA R YP++ +
Sbjct: 233 PSYRGSASPRRYPTSTV 249
>U55374-5|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 33.5 bits (73), Expect = 0.060
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 27 RSHYEEYSYSSNGECRQXXXXXXXXXXVVSPPHHYHEPYYEKPDRSESYQQMPQPRSEVW 86
R ++ +S+S + +Q + P H YY RS Y ++P P +++
Sbjct: 1816 RDYHTSHSHSHHPTSQQQQHQPMYSTSPLISPRSSHS-YYTP--RSSQYYEIPSPSPDIY 1872
Query: 87 EQDRCSAREREYPSAVM 103
R SA R YP++ +
Sbjct: 1873 PSYRGSASPRRYPTSTV 1889
Score = 28.7 bits (61), Expect = 1.7
Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 11/114 (9%)
Query: 2 SPTRRTTVARVSPDSD-ERYAHPAMTRSHYEEYSYSSNGECRQXXXXXXXXXXVVSPPHH 60
S R ++AR SP S ERY HP R+ S S + +
Sbjct: 1634 SSPRYRSMARASPPSPAERYGHPPRYRTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRS 1693
Query: 61 YHEPYYEKPDRSESYQQMPQPRSEVWEQDRCSAREREYPSAVMAEHRGFTRRPV 114
H+P Y + QQ QP + Q + + Y + H ++R P+
Sbjct: 1694 SHDPQYH-----QDQQQQQQPHHQQHSQHLQHSHHKTYQN-----HNQYSRSPI 1737
>U55374-4|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 33.5 bits (73), Expect = 0.060
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 27 RSHYEEYSYSSNGECRQXXXXXXXXXXVVSPPHHYHEPYYEKPDRSESYQQMPQPRSEVW 86
R ++ +S+S + +Q + P H YY RS Y ++P P +++
Sbjct: 1917 RDYHTSHSHSHHPTSQQQQHQPMYSTSPLISPRSSHS-YYTP--RSSQYYEIPSPSPDIY 1973
Query: 87 EQDRCSAREREYPSAVM 103
R SA R YP++ +
Sbjct: 1974 PSYRGSASPRRYPTSTV 1990
Score = 28.7 bits (61), Expect = 1.7
Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 11/114 (9%)
Query: 2 SPTRRTTVARVSPDSD-ERYAHPAMTRSHYEEYSYSSNGECRQXXXXXXXXXXVVSPPHH 60
S R ++AR SP S ERY HP R+ S S + +
Sbjct: 1735 SSPRYRSMARASPPSPAERYGHPPRYRTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRS 1794
Query: 61 YHEPYYEKPDRSESYQQMPQPRSEVWEQDRCSAREREYPSAVMAEHRGFTRRPV 114
H+P Y + QQ QP + Q + + Y + H ++R P+
Sbjct: 1795 SHDPQYH-----QDQQQQQQPHHQQHSQHLQHSHHKTYQN-----HNQYSRSPI 1838
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 33.5 bits (73), Expect = 0.060
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 27 RSHYEEYSYSSNGECRQXXXXXXXXXXVVSPPHHYHEPYYEKPDRSESYQQMPQPRSEVW 86
R ++ +S+S + +Q + P H YY RS Y ++P P +++
Sbjct: 1917 RDYHTSHSHSHHPTSQQQQHQPMYSTSPLISPRSSHS-YYTP--RSSQYYEIPSPSPDIY 1973
Query: 87 EQDRCSAREREYPSAVM 103
R SA R YP++ +
Sbjct: 1974 PSYRGSASPRRYPTSTV 1990
Score = 28.7 bits (61), Expect = 1.7
Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 11/114 (9%)
Query: 2 SPTRRTTVARVSPDSD-ERYAHPAMTRSHYEEYSYSSNGECRQXXXXXXXXXXVVSPPHH 60
S R ++AR SP S ERY HP R+ S S + +
Sbjct: 1735 SSPRYRSMARASPPSPAERYGHPPRYRTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRS 1794
Query: 61 YHEPYYEKPDRSESYQQMPQPRSEVWEQDRCSAREREYPSAVMAEHRGFTRRPV 114
H+P Y + QQ QP + Q + + Y + H ++R P+
Sbjct: 1795 SHDPQYH-----QDQQQQQQPHHQQHSQHLQHSHHKTYQN-----HNQYSRSPI 1838
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 31.5 bits (68), Expect = 0.24
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 63 EPYYEKPDRSESYQQMPQPRSEVWEQDRCSAREREYPSAVMAEHRGFTRRPVTRNS 118
E YYE P ++ S P + +R + P + H F RRP +RNS
Sbjct: 1378 EGYYEPPVQTYSPVPPRYPTLRRVDDSPLRSRAKSLPRIISPRHEHFVRRPHSRNS 1433
>AC006712-7|AAK39318.2| 264|Caenorhabditis elegans Hypothetical
protein Y119C1B.9 protein.
Length = 264
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 74 SYQQMPQPRSEVW---EQDRCSAREREYPSAVMAEHRGFTRRPVTRNSN 119
S+ +PQP W D +A+ RE+P A EH+ + + SN
Sbjct: 64 SFTSLPQPVQIQWMFRPSDSVNAQWREFPCAKKEEHKNCQKEEIIVESN 112
>Z81497-1|CAB04077.1| 1081|Caenorhabditis elegans Hypothetical
protein F10C2.4 protein.
Length = 1081
Score = 28.3 bits (60), Expect = 2.3
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 67 EKPDRSESYQQMPQPR-SEVWEQDRCSAREREYPSAVMAEHRGFTRRPVTRNSNLLSAVL 125
++P S ++ + R S+ +EQ S E E PS + G+ R V ++ + ++
Sbjct: 4 KRPGGSSFQPEVKRKRESDEFEQCYVSRFENELPSVPTIDKTGWARPAVDKDLGISKSIA 63
Query: 126 CLVKELD 132
C + E++
Sbjct: 64 CQILEVE 70
>L13200-7|AAA28189.1| 206|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 96
protein.
Length = 206
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 58 PHHYHEPYYEKPDRSESYQQMPQPRSEVWEQDRCSAREREYPSA 101
P + Y E+P ++YQQ Q + + +Q ++YP A
Sbjct: 152 PQQNPQQYQEQPQSYQTYQQPQQQQPQYGQQQNPQQFGQQYPGA 195
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
C26C6.1a protein.
Length = 1883
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/37 (24%), Positives = 22/37 (59%)
Query: 59 HHYHEPYYEKPDRSESYQQMPQPRSEVWEQDRCSARE 95
HH H+ +Y++ + QM P++ +++Q S+++
Sbjct: 1699 HHPHQQHYQQGGQPHPQMQMGPPQNGMFQQGSSSSQQ 1735
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/37 (24%), Positives = 22/37 (59%)
Query: 59 HHYHEPYYEKPDRSESYQQMPQPRSEVWEQDRCSARE 95
HH H+ +Y++ + QM P++ +++Q S+++
Sbjct: 1699 HHPHQQHYQQGGQPHPQMQMGPPQNGMFQQGSSSSQQ 1735
>Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical
protein C26C6.1b protein.
Length = 513
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/37 (24%), Positives = 22/37 (59%)
Query: 59 HHYHEPYYEKPDRSESYQQMPQPRSEVWEQDRCSARE 95
HH H+ +Y++ + QM P++ +++Q S+++
Sbjct: 329 HHPHQQHYQQGGQPHPQMQMGPPQNGMFQQGSSSSQQ 365
>U97013-6|AAB52337.1| 221|Caenorhabditis elegans Hypothetical
protein F28H1.1 protein.
Length = 221
Score = 26.6 bits (56), Expect = 6.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 54 VVSPPHHYHEPYYEKP 69
V PP +YH PY KP
Sbjct: 47 VAGPPRNYHHPYEVKP 62
>Z81509-5|CAI79166.1| 150|Caenorhabditis elegans Hypothetical
protein F21A3.8 protein.
Length = 150
Score = 26.2 bits (55), Expect = 9.1
Identities = 15/55 (27%), Positives = 20/55 (36%)
Query: 57 PPHHYHEPYYEKPDRSESYQQMPQPRSEVWEQDRCSAREREYPSAVMAEHRGFTR 111
PP YH + P + P+P SE E + E E + R F R
Sbjct: 54 PPASYHTEHQSTPSHTHKKYIDPEPYSEQDEHTSAAPHEEEEELPMERLKRAFGR 108
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 26.2 bits (55), Expect = 9.1
Identities = 14/67 (20%), Positives = 23/67 (34%)
Query: 29 HYEEYSYSSNGECRQXXXXXXXXXXVVSPPHHYHEPYYEKPDRSESYQQMPQPRSEVWEQ 88
H +YS + + PP +H P P +E+ Q P P +
Sbjct: 74 HLAKYSERRASYHVESSSYIHSSQQIQHPPQQHHPPPPSPPPVAETIQHQPHPSQQQPST 133
Query: 89 DRCSARE 95
S+R+
Sbjct: 134 TTISSRQ 140
Score = 26.2 bits (55), Expect = 9.1
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 58 PHHYHEPYYEKPDRSESYQQMPQPRSEVWEQDRCSAREREYPSAVMAEH 106
P H+ + Y + +P VW S +ERE PS+V+A++
Sbjct: 348 PRPIHQNFSASEIELHHYSRNAEPSVVVWPP--VSEKERERPSSVLAKN 394
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.126 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,642,739
Number of Sequences: 27539
Number of extensions: 135633
Number of successful extensions: 372
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 355
Number of HSP's gapped (non-prelim): 19
length of query: 144
length of database: 12,573,161
effective HSP length: 75
effective length of query: 69
effective length of database: 10,507,736
effective search space: 725033784
effective search space used: 725033784
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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