Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001356-TA|BGIBMGA001356-PA|undefined
(144 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19260.1 68417.m02840 kelch repeat-containing protein contain... 31 0.23
At5g66370.1 68418.m08368 hypothetical protein similar to unknown... 31 0.40
At2g27350.5 68415.m03295 OTU-like cysteine protease family prote... 30 0.53
At2g27350.4 68415.m03294 OTU-like cysteine protease family prote... 30 0.53
At2g27350.3 68415.m03293 OTU-like cysteine protease family prote... 30 0.53
At2g27350.2 68415.m03292 OTU-like cysteine protease family prote... 30 0.53
At2g27350.1 68415.m03291 OTU-like cysteine protease family prote... 30 0.53
At4g19330.1 68417.m02848 kelch repeat-containing F-box family pr... 30 0.70
At3g01560.1 68416.m00086 proline-rich family protein contains pr... 29 1.2
At4g00820.1 68417.m00113 calmodulin-binding protein-related cont... 29 1.6
At4g28365.1 68417.m04060 plastocyanin-like domain-containing pro... 28 2.1
At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein ... 28 2.1
At4g19250.1 68417.m02839 kelch repeat-containing protein contain... 28 2.8
At4g26030.1 68417.m03748 hypothetical protein 27 3.7
At1g07350.1 68414.m00783 transformer serine/arginine-rich ribonu... 27 3.7
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 27 4.9
At1g01260.1 68414.m00043 basic helix-loop-helix (bHLH) family pr... 27 4.9
At2g39340.1 68415.m04829 SAC3/GANP family protein contains Pfam ... 27 6.5
At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related prot... 27 6.5
At5g15890.1 68418.m01859 expressed protein 26 8.6
At2g22230.1 68415.m02638 beta-hydroxyacyl-ACP dehydratase, putat... 26 8.6
>At4g19260.1 68417.m02840 kelch repeat-containing protein contains
Pfam profile PF01344: Kelch motif
Length = 288
Score = 31.5 bits (68), Expect = 0.23
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 54 VVSPPHHYHEPYYEKPDRSESYQ---QMPQPRSEVWEQDRCSAREREYPSAVMAEHRGFT 110
++S H H +E SE+Y+ Q P ++VW D+ ++R+ PS ++A FT
Sbjct: 219 LLSRSHICHRQVHETVG-SETYEIGGQNMTPSTDVWVYDKLIGKQRKAPSMMVARKNAFT 277
>At5g66370.1 68418.m08368 hypothetical protein similar to unknown
protein (emb CAB62624.1)
Length = 150
Score = 30.7 bits (66), Expect = 0.40
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 59 HHYHEPYY-EKPD---RSESYQQMPQPRSEVWEQDRCSARE 95
HH+H+ +Y +P+ S+SY P + W D C +R+
Sbjct: 83 HHHHQHHYPHEPNLHYNSDSYYGQPPSYNSYWPSDNCYSRQ 123
>At2g27350.5 68415.m03295 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 388
Score = 30.3 bits (65), Expect = 0.53
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 1 MSPTRRTTVAR--VSPDSDERYAHPAMTRSHYEEYSYSSNGE 40
+ PTRR R VS S +HP+ RSH E Y+S+ E
Sbjct: 145 IGPTRRAAGPRSLVSSRSSPTGSHPSSPRSHSENEGYNSSDE 186
>At2g27350.4 68415.m03294 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 388
Score = 30.3 bits (65), Expect = 0.53
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 1 MSPTRRTTVAR--VSPDSDERYAHPAMTRSHYEEYSYSSNGE 40
+ PTRR R VS S +HP+ RSH E Y+S+ E
Sbjct: 145 IGPTRRAAGPRSLVSSRSSPTGSHPSSPRSHSENEGYNSSDE 186
>At2g27350.3 68415.m03293 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 506
Score = 30.3 bits (65), Expect = 0.53
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 1 MSPTRRTTVAR--VSPDSDERYAHPAMTRSHYEEYSYSSNGE 40
+ PTRR R VS S +HP+ RSH E Y+S+ E
Sbjct: 145 IGPTRRAAGPRSLVSSRSSPTGSHPSSPRSHSENEGYNSSDE 186
>At2g27350.2 68415.m03292 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 505
Score = 30.3 bits (65), Expect = 0.53
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 1 MSPTRRTTVAR--VSPDSDERYAHPAMTRSHYEEYSYSSNGE 40
+ PTRR R VS S +HP+ RSH E Y+S+ E
Sbjct: 145 IGPTRRAAGPRSLVSSRSSPTGSHPSSPRSHSENEGYNSSDE 186
>At2g27350.1 68415.m03291 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 505
Score = 30.3 bits (65), Expect = 0.53
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 1 MSPTRRTTVAR--VSPDSDERYAHPAMTRSHYEEYSYSSNGE 40
+ PTRR R VS S +HP+ RSH E Y+S+ E
Sbjct: 145 IGPTRRAAGPRSLVSSRSSPTGSHPSSPRSHSENEGYNSSDE 186
>At4g19330.1 68417.m02848 kelch repeat-containing F-box family
protein very low similarity to SKP1 interacting partner
6 [Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 537
Score = 29.9 bits (64), Expect = 0.70
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 72 SESYQ---QMPQPRSEVWEQDRCSAREREYPSAVMAEHRGFT 110
SE+Y+ Q P ++VW D+ ++R+ PS ++A FT
Sbjct: 291 SETYEIGGQNMTPSTDVWVYDKLIGKQRKAPSMMVARKNAFT 332
>At3g01560.1 68416.m00086 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 511
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 62 HEPYYEKPDRSESYQQMPQPRSEVWEQDRCSAREREYP 99
H+P Y+ P + Y Q P P S +++ + + YP
Sbjct: 312 HQPSYQSPPQQPQYPQQPPPSSGYNPEEQPPYQMQSYP 349
>At4g00820.1 68417.m00113 calmodulin-binding protein-related
contains Pfam profile PF00612: IQ calmodulin-binding
motif
Length = 534
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 4 TRRTTVARVSPDSDERYAHPAMTRSHYEEYSYSS 37
TR + SP +R + P+ T HY+++++SS
Sbjct: 334 TRGNSRTGASPSRSQRPSSPSRTSHHYQQHNFSS 367
>At4g28365.1 68417.m04060 plastocyanin-like domain-containing
protein
Length = 199
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 28 SHYEEYSYSSNGECRQXXXXXXXXXXVVSPPHHYHEPYYEKPDRSESYQQMPQP 81
SH Y + S G + V+S HH H P + P S +Q++ P
Sbjct: 101 SHSGSYFFIS-GNSQNCLKGQKLAVKVLSTVHHSHSPRHTSPSPSPVHQELSSP 153
>At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein /
RNA recognition motif (RRM)-containing protein similar
to SP|O59800 Cell cycle control protein cwf5
{Schizosaccharomyces pombe}, RNA Binding Protein 47
[Nicotiana plumbaginifolia] GI:9663769; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 481
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 57 PPHHYHEP----YYEKPDRSESYQQMPQPRS 83
PP+H+H+P +Y P + Y Q P P S
Sbjct: 409 PPNHHHQPSPMQHYAPPPAAYPYPQQPGPGS 439
>At4g19250.1 68417.m02839 kelch repeat-containing protein contains
Pfam profile PF01344: Kelch motif
Length = 228
Score = 27.9 bits (59), Expect = 2.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 81 PRSEVWEQDRCSAREREYPSAVMAEHRGFT 110
P ++VW D+ ++R+ PS ++A FT
Sbjct: 3 PSTDVWVYDKLIGKQRKAPSMMVARTNAFT 32
>At4g26030.1 68417.m03748 hypothetical protein
Length = 220
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 56 SPPHHYHEPYYEKPDRSESY 75
S P HYHE Y K RS Y
Sbjct: 104 SSPKHYHEQYVHKNGRSVKY 123
>At1g07350.1 68414.m00783 transformer serine/arginine-rich
ribonucleoprotein, putative similar to GB:Y09506 from
[Nicotiana tabacum] (Plant Mol. Biol. 35 (3), 261-269
(1997))
Length = 382
Score = 27.5 bits (58), Expect = 3.7
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 62 HEPYYEKPDRSESYQQMPQPRS-EVWEQDRCSAREREYPSAVMAEHR 107
+ PYY + DRS SY + + R + R +R R Y A R
Sbjct: 246 YSPYYRRRDRSRSYSRNCRARDRSPYYMRRYRSRSRSYSPRYRARDR 292
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 27.1 bits (57), Expect = 4.9
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 57 PPHHYHEPYYEKPDRSESYQQMPQPR 82
P H+P Y+ P + Y Q P P+
Sbjct: 319 PTQSLHQPPYQPPPQQPQYPQQPPPQ 344
>At1g01260.1 68414.m00043 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 590
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 59 HHYHEPYYEKPDRSESYQQMPQPRSEVWEQDRCSAREREYPSAVMAEHRGFTRRPVTRNS 118
H +H+ ++P + + ++Q + + DR R YP+ +R P T N+
Sbjct: 277 HQHHQQQQQQPPQQQQHRQFREKLTVRKMDDRAPKRLDAYPN---NGNRFMFSNPGTNNN 333
Query: 119 NLLS 122
LLS
Sbjct: 334 TLLS 337
>At2g39340.1 68415.m04829 SAC3/GANP family protein contains Pfam
profile: PF03399 SAC3/GANP family
Length = 1006
Score = 26.6 bits (56), Expect = 6.5
Identities = 15/86 (17%), Positives = 30/86 (34%)
Query: 14 PDSDERYAHPAMTRSHYEEYSYSSNGECRQXXXXXXXXXXVVSPPHHYHEPYYEKPDRSE 73
P ++ PA + +Y +Y+ + +PP HY + Y + +
Sbjct: 198 PSTNYSNQTPASNQGNYTDYTSNPYQNYTPDAANTHSSTIATTPPVHYQQNYQQWTEYYS 257
Query: 74 SYQQMPQPRSEVWEQDRCSAREREYP 99
+ P +E SA + +P
Sbjct: 258 QTEVPCAPGTEKLSTPTTSAYSQSFP 283
>At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related protein
2 (PCAT2) contains Pfam domains PF02135: TAZ zinc finger
and PF00569: Zinc finger, ZZ type; identical to cDNA
p300/CBP acetyltransferase-related protein 2
GI:12597460
Length = 1691
Score = 26.6 bits (56), Expect = 6.5
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 59 HHYHEPYYEKPDRSESYQQMPQPRSEVWEQDRCSAREREYPSAVMAEHRGFTRRPVTRNS 118
H HEP E P S + Q P EQ + S + +Y + H G PVT S
Sbjct: 452 HVKHEPGMENPSES-IHSQTP-------EQFQLSQFQNQYQNNAEDRHAGSQILPVTSQS 503
Query: 119 NLLSAV 124
++ ++V
Sbjct: 504 DMCTSV 509
>At5g15890.1 68418.m01859 expressed protein
Length = 526
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 86 WEQDRCSAR---EREYPSAVMAEHRGFTRRPVTRNSNLLSAVLCLVKELDYP 134
W+ + C +E+ V + GF ++RN + ++LCL+ ++YP
Sbjct: 232 WKPESCDLPIFDPQEFLEMVRGKAMGFVGDSISRNQ--VQSLLCLLSRVEYP 281
>At2g22230.1 68415.m02638 beta-hydroxyacyl-ACP dehydratase,
putative similar to beta-hydroxyacyl-ACP dehydratase
from Toxoplasma gondii [GI:3850997]; contains Pfam
profile PF01377 Thioester dehydratase
Length = 220
Score = 26.2 bits (55), Expect = 8.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 59 HHYHEPYYEKPDRSESYQQMPQPRS 83
HH+H+P + RS S P RS
Sbjct: 19 HHHHQPLHLSSSRSHSVSLPPNKRS 43
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.126 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,399,734
Number of Sequences: 28952
Number of extensions: 123425
Number of successful extensions: 308
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 298
Number of HSP's gapped (non-prelim): 21
length of query: 144
length of database: 12,070,560
effective HSP length: 75
effective length of query: 69
effective length of database: 9,899,160
effective search space: 683042040
effective search space used: 683042040
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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