GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001356-TA|BGIBMGA001356-PA|undefined
         (144 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   1.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   2.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   5.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   5.1  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/22 (40%), Positives = 12/22 (54%), Gaps = 2/22 (9%)

Query: 60  HYHEPY--YEKPDRSESYQQMP 79
           +   PY  YE PD  + YQ+ P
Sbjct: 83  YQQSPYLMYENPDEEKRYQEHP 104



 Score = 22.2 bits (45), Expect = 2.2
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 1/73 (1%)

Query: 29  HYEEYSYSSNGECRQXXXXXXXXXXVVSPPHHYHEPYYEKPDRSESYQQMPQPRSE-VWE 87
           H  E S S++ +  +          + SPP H   P Y+       +Q + Q     ++E
Sbjct: 33  HSAESSASNSPDHYERFSPSTHLMDLSSPPEHRDLPIYQSHHHLHHHQVLYQQSPYLMYE 92

Query: 88  QDRCSAREREYPS 100
                 R +E+P+
Sbjct: 93  NPDEEKRYQEHPN 105


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 6/14 (42%), Positives = 13/14 (92%)

Query: 128 VKELDYPSLEVAEM 141
           V++LD+P +E+A++
Sbjct: 424 VQQLDFPGIEIADI 437


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 63  EPYYEKPDRSESYQQMPQPRSEVWEQDRCSARE 95
           E YY K +  +  Q +P+  S + E+ +    E
Sbjct: 384 ETYYSKHNTQQFTQYIPESSSNLQEKTKIDLLE 416


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 9/30 (30%)

Query: 55  VSPPHHYHE---------PYYEKPDRSESY 75
           + PPHH+H           Y + P  SESY
Sbjct: 347 MGPPHHHHHHQTQSLQHLHYRQPPTLSESY 376


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.126    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,990
Number of Sequences: 429
Number of extensions: 1712
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 144
length of database: 140,377
effective HSP length: 52
effective length of query: 92
effective length of database: 118,069
effective search space: 10862348
effective search space used: 10862348
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)
S2: 40 (20.2 bits)