Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001355-TA|BGIBMGA001355-PA|undefined
(102 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1861.08c |||U2 snRNP-associated protein Lea1 |Schizosaccharo... 44 6e-06
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 37 7e-04
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 36 0.001
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 26 1.3
SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr... 25 1.8
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 25 2.3
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 25 2.3
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 25 3.1
SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase |Schizosa... 24 5.4
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 24 5.4
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 24 5.4
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 23 7.1
SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharo... 23 9.3
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 23 9.3
SPBC30D10.06 |lsm4||U6 snRNP-associated protein Lsm4|Schizosacch... 23 9.3
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 23 9.3
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 23 9.3
SPAP27G11.08c |meu32|mug11|sequence orphan|Schizosaccharomyces p... 23 9.3
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 23 9.3
>SPBC1861.08c |||U2 snRNP-associated protein Lea1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 239
Score = 43.6 bits (98), Expect = 6e-06
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 32 LRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTVLRNLPNLEKLDNVP 91
L+ L + +N ++E+ ++ L P LTNL +NP Q YR+ ++ +P+L LD
Sbjct: 89 LKTLSLAQNHLQEIADLDPLASCPQLTNLSCIDNPVAQKQYYRLYLIWRIPSLHILDFER 148
Query: 92 VQPDEVRTSEE 102
V+ +E +EE
Sbjct: 149 VRRNERLRAEE 159
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 36.7 bits (81), Expect = 7e-04
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 31 RLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEY-RMTVLRNLPNLEKLDN 89
+L L I +N IR++ + HLR L +L +L + + + + ++ V+ +P+L KL++
Sbjct: 291 KLTFLDISENNIRDIRSLDHLRTLENLKHLRITLSYFNKPTDIAKLLVIARIPSLVKLND 350
Query: 90 VPVQPDE 96
V + P+E
Sbjct: 351 VNISPNE 357
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 36.3 bits (80), Expect = 0.001
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 16 SINKIRTLGDFAGCRRLRELYIRKNEIRELNEIR-HLRHLPDLTNLWLDENPC--TQHPE 72
S N I+ L AG + L EL+ NE+ EI L L L ++ + NP T
Sbjct: 245 SNNMIKHLSYLAGLKNLVELWASNNELSSFQEIEDELSGLKKLETVYFEGNPLQKTNPAV 304
Query: 73 YRMTVLRNLPNLEKLD 88
YR V LP L ++D
Sbjct: 305 YRNKVRLCLPQLRQID 320
Score = 31.9 bits (69), Expect = 0.020
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 18 NKIRTLGDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTV 77
N+IR + + G RL L + N+IR I +L L +L LW+ +N ++T
Sbjct: 136 NRIRRIENLEGLDRLTNLELGGNKIR---VIENLDTLVNLEKLWVGKN--------KITK 184
Query: 78 LRNLPNLEKLDNVPVQPDEVRTSE 101
N L+KL + +Q + + E
Sbjct: 185 FENFEKLQKLSLLSIQSNRITQFE 208
Score = 27.1 bits (57), Expect = 0.57
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 45 LNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTVLRNLPNLEKLDNVPVQPDEVRTSE 101
+ IR++ HL L NL+ +N R+ + NL L++L N+ + +++R E
Sbjct: 116 IKTIRNINHLKGLENLFFVQN--------RIRRIENLEGLDRLTNLELGGNKIRVIE 164
Score = 26.2 bits (55), Expect = 1.0
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 18 NKIRTLGDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTV 77
NKI +F ++L L I+ N I + + L H L L++ N T + V
Sbjct: 180 NKITKFENFEKLQKLSLLSIQSNRITQFENLACLSHC--LRELYVSHNGLTSFS--GIEV 235
Query: 78 LRNLPNLEKLDNV 90
L NL L+ +N+
Sbjct: 236 LENLEILDVSNNM 248
Score = 24.2 bits (50), Expect = 4.0
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 23 LGDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTVLRNLP 82
L F+G L L I + + +L L +L LW N + E + L
Sbjct: 227 LTSFSGIEVLENLEILDVSNNMIKHLSYLAGLKNLVELWASNNELSSFQE----IEDELS 282
Query: 83 NLEKLDNV 90
L+KL+ V
Sbjct: 283 GLKKLETV 290
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 25.8 bits (54), Expect = 1.3
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 18 NKIRTLG-DFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPE 72
N I+++G + RLR L IR N +RE E L L L L + N Q PE
Sbjct: 62 NFIKSIGPEILKFTRLRYLNIRSNVLREFPE--SLCRLESLEILDISRNKIKQLPE 115
>SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 511
Score = 25.4 bits (53), Expect = 1.8
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 58 TNLWLDENPCTQHPEYRMTVLRNLPNLEKLDNVPVQ 93
+NL + + C P++R+ VL+N + +L + VQ
Sbjct: 120 SNLMIIASWCDSFPKFRVEVLKNSKQISRLIHSDVQ 155
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.0 bits (52), Expect = 2.3
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 63 DENPCTQHPEYRMTVLRNL--PNLEKLDN 89
DENP H E++ +L++ PN+ DN
Sbjct: 112 DENPLMGHEEFKSPLLQSTPKPNINNPDN 140
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 25.0 bits (52), Expect = 2.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 16 SINKIRTLGDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLT 58
S N++ L + LREL + N + L+ I+HL L L+
Sbjct: 676 SYNQLEDLTGLSSLIHLRELKVDSNHLWSLDGIQHLDGLLKLS 718
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 24.6 bits (51), Expect = 3.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 51 LRHLPDLTNLWLDENPCTQHPEYR 74
LR PDL ++DE+P ++H + R
Sbjct: 903 LRAYPDLQIAYMDEDPQSRHNDER 926
>SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 23.8 bits (49), Expect = 5.4
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 36 YIRKNEIRELNEIRHLRHLPDLTNLWL 62
Y++KN++++ ++ + DL +LWL
Sbjct: 26 YLKKNDLQKFRKLLNQVQQLDLRSLWL 52
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 23.8 bits (49), Expect = 5.4
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 5/28 (17%)
Query: 29 CRRLRE--LYI---RKNEIRELNEIRHL 51
C+RLR+ L++ R + +REL E+RHL
Sbjct: 370 CKRLRKENLFLQSERTHLLRELEELRHL 397
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 23.8 bits (49), Expect = 5.4
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 12 ISGSSINKIR-TLGDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQH 70
+SG+ + +I LG+ +L L + N+I H+ L L L L N T
Sbjct: 363 LSGNELTEIPYALGELP---QLCSLNLASNKITGCRTFYHIS-LSHLQILVLSRNHLTS- 417
Query: 71 PEYRMTVLRNLPNLEKLD 88
++ L N+P+LEKLD
Sbjct: 418 ----LSGLENVPSLEKLD 431
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 23.4 bits (48), Expect = 7.1
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 33 RELYIRKNEIRELNEIRHLRHLPDLTNLWLDEN 65
++L+ +RE ++ LRHLP L+ LD N
Sbjct: 1218 QKLFNATTSLREFAALKSLRHLP-LSQRILDAN 1249
>SPAPB8E5.07c |||ribosome biogenesis protein
Rrp12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1163
Score = 23.0 bits (47), Expect = 9.3
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 47 EIRHLRHLPDLTNLWLDE--NPCTQHPEYRMTVLRNLPNLEKLDNV--PVQPDEVR 98
E +R L L N+ + P T+HP + T L LE L P P EV+
Sbjct: 154 EKTRVRSLQILANILKNPPAGPVTEHPAIKYTAFEPLRLLESLATAKKPKTPAEVQ 209
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 23.0 bits (47), Expect = 9.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 63 DENPCTQHPEYRMTVLRNLPNLEKLDNVPVQPDEV 97
+E Q+ EYR LE D V +QP+E+
Sbjct: 451 EEEEVRQYEEYRKKQKELQEELEFPDEVELQPNEL 485
>SPBC30D10.06 |lsm4||U6 snRNP-associated protein
Lsm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 23.0 bits (47), Expect = 9.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 20 IRTLGDFAGCRRLRELYIRKNEIREL 45
IRT+ D RL E YIR N I+ L
Sbjct: 44 IRTMPDGDKFFRLPECYIRGNNIKYL 69
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 23.0 bits (47), Expect = 9.3
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 2 SLCTYYKDPKISGSSINK 19
+L + +K PKI SS+NK
Sbjct: 24 TLSSIFKRPKIKSSSLNK 41
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 23.0 bits (47), Expect = 9.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 31 RLRELYIRKNEIRELNEIRHLR 52
RL+E+Y E E ++RHLR
Sbjct: 117 RLKEVYYIYRECAETWQLRHLR 138
>SPAP27G11.08c |meu32|mug11|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 392
Score = 23.0 bits (47), Expect = 9.3
Identities = 10/39 (25%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 46 NEIRHLRHLPDLTNLWLDENPCTQHPEYRMTVLRNLPNL 84
N++ LR DL ++ +DE ++P++ +L + N+
Sbjct: 306 NDLTGLR-FADLISIIVDETGSVKNPKFSQKLLEEITNI 343
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 23.0 bits (47), Expect = 9.3
Identities = 9/24 (37%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Query: 37 IRKNEIRELNEIRHLRHLPD-LTN 59
++K+ +++LNE++H+ + D LTN
Sbjct: 193 MKKSTLQQLNEVKHILNERDILTN 216
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.138 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,020
Number of Sequences: 5004
Number of extensions: 20675
Number of successful extensions: 65
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 46
Number of HSP's gapped (non-prelim): 24
length of query: 102
length of database: 2,362,478
effective HSP length: 63
effective length of query: 39
effective length of database: 2,047,226
effective search space: 79841814
effective search space used: 79841814
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)
- SilkBase 1999-2023 -