Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001355-TA|BGIBMGA001355-PA|undefined
(102 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19680.1 68418.m02341 leucine-rich repeat family protein cont... 46 6e-06
At3g17920.1 68416.m02282 leucine-rich repeat family protein cont... 38 0.001
At1g48540.2 68414.m05428 leucine-rich repeat family protein 33 0.035
At1g48540.1 68414.m05427 leucine-rich repeat family protein 33 0.035
At3g51560.1 68416.m05646 disease resistance protein (TIR-NBS-LRR... 32 0.081
At2g25790.1 68415.m03095 leucine-rich repeat transmembrane prote... 32 0.081
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont... 31 0.11
At4g27190.1 68417.m03905 disease resistance protein (NBS-LRR cla... 30 0.25
At4g10780.1 68417.m01758 disease resistance protein (CC-NBS-LRR ... 30 0.25
At4g03260.1 68417.m00445 leucine-rich repeat family protein cont... 30 0.33
At5g24120.1 68418.m02835 RNA polymerase sigma subunit SigE (sigE... 29 0.57
At5g46260.1 68418.m05695 disease resistance protein (TIR-NBS-LRR... 29 0.76
At5g37630.1 68418.m04532 chromosome condensation family protein ... 29 0.76
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 28 1.0
At4g25960.1 68417.m03735 multidrug resistance P-glycoprotein, pu... 28 1.0
At3g50690.1 68416.m05546 leucine-rich repeat family protein 28 1.0
At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein ... 28 1.0
At5g61240.1 68418.m07681 leucine-rich repeat family protein cont... 28 1.3
At4g15215.1 68417.m02332 ABC transporter family protein similar ... 28 1.3
At2g45870.1 68415.m05705 expressed protein contains Pfam profile... 28 1.3
At2g17050.1 68415.m01968 disease resistance protein (TIR-NBS-LRR... 28 1.3
At4g19050.1 68417.m02806 mob1/phocein family protein contains Pf... 27 1.7
At3g29130.1 68416.m03647 expressed protein ; expression supporte... 27 1.7
At1g12220.1 68414.m01414 disease resistance protein RPS5 (CC-NBS... 27 1.7
At4g15230.1 68417.m02333 ABC transporter family protein similar ... 27 2.3
At3g62980.1 68416.m07075 transport inhibitor response 1 (TIR1) (... 27 2.3
At1g12820.1 68414.m01489 transport inhibitor response protein, p... 27 2.3
At1g15740.1 68414.m01888 leucine-rich repeat family protein 27 3.1
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 26 5.3
At3g26810.1 68416.m03354 transport inhibitor response protein, p... 26 5.3
At3g15410.1 68416.m01955 leucine-rich repeat family protein cont... 26 5.3
At2g46190.1 68415.m05743 hypothetical protein 26 5.3
At5g08430.1 68418.m00993 SWIB complex BAF60b domain-containing p... 25 7.1
At4g15475.1 68417.m02365 F-box family protein (FBL4) 99.7% ident... 25 7.1
At3g61320.1 68416.m06862 expressed protein contains Pfam PF05249... 25 7.1
At3g15490.1 68416.m01964 expressed protein contains Pfam profile... 25 7.1
At2g26290.1 68415.m03155 protein kinase, putative similar to aux... 25 7.1
At1g79140.1 68414.m09228 expressed protein 25 7.1
At1g71440.1 68414.m08253 tubulin folding cofactor E / Pfifferlin... 25 7.1
At4g33330.1 68417.m04740 glycogenin glucosyltransferase (glycoge... 25 9.3
At4g18050.1 68417.m02686 ABC transporter family protein contains... 25 9.3
At2g45890.1 68415.m05707 expressed protein contains Pfam profile... 25 9.3
At2g23600.1 68415.m02816 hydrolase, alpha/beta fold family prote... 25 9.3
At2g18870.1 68415.m02200 hypothetical protein contains 1 transme... 25 9.3
At1g78230.1 68414.m09116 leucine-rich repeat family protein 25 9.3
>At5g19680.1 68418.m02341 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 328
Score = 45.6 bits (103), Expect = 6e-06
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 16 SINKIRTLGDFAGCRRLRELYIRKNEIRELNEIRHL--RHLPDLTNLWLDENPCTQHPEY 73
S NK+ ++ D +L +L++ N+I L I LT ++L+ NPC + +Y
Sbjct: 249 SNNKLTSVDDIQNLTKLEDLWLNDNQIESLEAITEAVTGSKEKLTTIYLENNPCAKSSDY 308
Query: 74 RMTVLRNLPNLEKLDN 89
V + PN+E++D+
Sbjct: 309 VAAVRQIFPNVEQIDS 324
Score = 36.7 bits (81), Expect = 0.003
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 16 SINKIRTL-GDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYR 74
S N+I +L G L+ELY+ KNE+ ++ EI HL +L L L N R
Sbjct: 117 SFNEITSLEGISKASSTLKELYVSKNEVNKIMEIEHLHNLQILE---LGSN--------R 165
Query: 75 MTVLRNLPNLEKLDNV 90
+ V+ NL N KL+ +
Sbjct: 166 LRVMENLENFTKLEEL 181
>At3g17920.1 68416.m02282 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 962
Score = 38.3 bits (85), Expect = 0.001
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 18 NKIRTLGDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTV 77
N + TL + L L + N I + +E+ L L LT+LWL+ NP YR V
Sbjct: 240 NALTTLRGIENLKSLEGLDVSFNLISDFSELEFLGSLSFLTDLWLEGNPICCARWYRAHV 299
Query: 78 LR--NLPNLEKLD 88
L LPN KLD
Sbjct: 300 LSYVYLPNDLKLD 312
>At1g48540.2 68414.m05428 leucine-rich repeat family protein
Length = 1051
Score = 33.1 bits (72), Expect = 0.035
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 18 NKIRTLGDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTV 77
N + TL + L+ L + N I +E+ L L L LWL+ NP YR V
Sbjct: 246 NALTTLRGIENLKSLQGLDVSYNIISNFSELEFLWSLSQLKELWLEGNPVCCARWYRAHV 305
Query: 78 LR--NLPNLEKLD 88
LP+ KLD
Sbjct: 306 FSYVALPDELKLD 318
>At1g48540.1 68414.m05427 leucine-rich repeat family protein
Length = 1063
Score = 33.1 bits (72), Expect = 0.035
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 18 NKIRTLGDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTV 77
N + TL + L+ L + N I +E+ L L L LWL+ NP YR V
Sbjct: 246 NALTTLRGIENLKSLQGLDVSYNIISNFSELEFLWSLSQLKELWLEGNPVCCARWYRAHV 305
Query: 78 LR--NLPNLEKLD 88
LP+ KLD
Sbjct: 306 FSYVALPDELKLD 318
>At3g51560.1 68416.m05646 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1253
Score = 31.9 bits (69), Expect = 0.081
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 23 LGDFAGC-RRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTVLRNL 81
L D G R L ELY+ I+E+ + ++HL +L L L QH ++ L++L
Sbjct: 794 LEDIQGIPRNLEELYLAGTAIQEVTSL--IKHLSELVVLDLQNCKRLQHLPMEISNLKSL 851
Query: 82 PNLEKLDNVPVQPDEVRTS 100
L+ D + EV TS
Sbjct: 852 VTLKLTDPSGMSIREVSTS 870
Score = 25.4 bits (53), Expect = 7.1
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 1 MSLCTYYKDPKISGSSINKIRTLGDFAGC-RRLRELYIRKNEIRELNEIRHLRHL 54
+S+ Y + K+ +++ L D G + LR+LY+ I+EL + HL L
Sbjct: 707 LSIMVYLDNLKVL--DLSQCLELEDIQGIPKNLRKLYLGGTAIKELPSLMHLSEL 759
>At2g25790.1 68415.m03095 leucine-rich repeat transmembrane protein
kinase, putative
Length = 960
Score = 31.9 bits (69), Expect = 0.081
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 16 SINKI-RTLGDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYR 74
S+NK L DF+ +RL++L + +N+I + + L P++ +L L EN T
Sbjct: 463 SVNKFFGELPDFSRSKRLKKLDLSRNKISGVVP-QGLMTFPEIMDLDLSENEITGVIPRE 521
Query: 75 MTVLRNLPNLEKLDN 89
++ +NL NL+ N
Sbjct: 522 LSSCKNLVNLDLSHN 536
>At5g22320.1 68418.m02604 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 452
Score = 31.5 bits (68), Expect = 0.11
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 18 NKIRTLGDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTV 77
NK++++ + + LR L + NEI + I L L DL +L L NP ++ + ++
Sbjct: 95 NKLKSMNEISSLVNLRALILNDNEI---SSICKLDLLKDLNSLVLSRNPISEIGD-SLSK 150
Query: 78 LRNLPNLEKLD 88
L+NL + D
Sbjct: 151 LKNLSKISLSD 161
Score = 25.8 bits (54), Expect = 5.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 18 NKIRTLGDFAGCRRLRELYIRKNEIRELNEIRHLRHL 54
NK+++L +L L KN+++ +NEI L +L
Sbjct: 73 NKLQSLNGIEALTKLTVLNAGKNKLKSMNEISSLVNL 109
>At4g27190.1 68417.m03905 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 985
Score = 30.3 bits (65), Expect = 0.25
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 29 CRRLRELYIRKNEIRELN----EIRHLRHLPDLTNLWLDENPCTQHPEYRMTVLRNLPNL 84
CR+LR L ++N + N EI + L +L L P P R+ LRNLPNL
Sbjct: 846 CRKLRTLLDKRNFLTIPNLEEIEISYCDSLQNLHEALLYHQPFV--PNLRVLKLRNLPNL 903
Query: 85 EKLDN 89
+ N
Sbjct: 904 VSICN 908
>At4g10780.1 68417.m01758 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 892
Score = 30.3 bits (65), Expect = 0.25
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 13 SGSSINKIRTLGDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQH-- 70
+GS + K+ + D+ RRL + N I E++ P+LT L+L EN H
Sbjct: 500 AGSGLRKVPKVEDWGAVRRLS---LMNNGIEEISGSPEC---PELTTLFLQENKSLVHIS 553
Query: 71 ----PEYRMTVLRNLPNLEKLDNVPVQPDEV 97
R V+ +L +LD +P Q E+
Sbjct: 554 GEFFRHMRKLVVLDLSENHQLDGLPEQISEL 584
>At4g03260.1 68417.m00445 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 677
Score = 29.9 bits (64), Expect = 0.33
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 16 SINKIRTLGD-FAGCRRLRELYIRKNEIRELNEIRHLRHL 54
S N+I LG A C L+ELY+ N+I E+ + L L
Sbjct: 471 SYNRILRLGHGLASCSSLKELYLAGNKISEIEGLHRLLKL 510
>At5g24120.1 68418.m02835 RNA polymerase sigma subunit SigE (sigE) /
sigma-like factor (SIG5) identical to RNA polymerase
sigma subunit SigE [Arabidopsis thaliana] GI:4972299,
sigma-like factor [Arabidopsis thaliana] GI:4033838;
contains Pfam profiles PF04545: Sigma-70, region 4,
PF04539: Sigma-70 region 3, PF04542: Sigma-70 region 2
Length = 517
Score = 29.1 bits (62), Expect = 0.57
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 21 RTLGDFAGCRRLRELYIRKNEIRELNEIRH 50
RTLG+ AG + +RK+E++ L +++H
Sbjct: 476 RTLGEIAGNLNISREMVRKHEVKALMKLKH 505
>At5g46260.1 68418.m05695 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1205
Score = 28.7 bits (61), Expect = 0.76
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 11 KISGSSINKIRTLGDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDL 57
+I + +K+RT DF+ + +LY+ I EL HL +L DL
Sbjct: 702 RIDFTKCSKLRTFPDFS--TNISDLYLTGTNIEELPSNLHLENLIDL 746
>At5g37630.1 68418.m04532 chromosome condensation family protein
contains pfam profile: PF04154 chromosome condensation
protein 3, C-terminal region
Length = 1051
Score = 28.7 bits (61), Expect = 0.76
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 37 IRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTVLRNLP 82
IR +R L+ + D+ +L L+ P Q+PE R T++ +LP
Sbjct: 177 IRTFAVRSLSRFVNDPENSDILDLLLEVLPLEQNPEVRKTIVLSLP 222
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 28.3 bits (60), Expect = 1.0
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 65 NPCTQHPEYRMTVLRNLPNLEKLDNVPVQPDE 96
+P YRM ++ +LP L+ LDN+ ++ +
Sbjct: 332 SPICSEKHYRMYMINSLPKLQVLDNLAIRKSD 363
>At4g25960.1 68417.m03735 multidrug resistance P-glycoprotein,
putative similar to multidrug resistant P-glycoprotein
GI:4204793 from [Solanum tuberosum]
Length = 1233
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 6 YYKDPKISGSSINKIRTLGDFAGCRRLRELYIRK 39
Y K ++G S++ IRT+ F ++ ELY R+
Sbjct: 847 YLKANMLAGESVSNIRTVAAFCAEEKILELYSRE 880
>At3g50690.1 68416.m05546 leucine-rich repeat family protein
Length = 447
Score = 28.3 bits (60), Expect = 1.0
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 27 AGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTVLRNLPNLEK 86
AG +L + N I+ + ++ L L L +L L E P T+ +YR V + L+
Sbjct: 92 AGLDSFCDLDLSNNRIQFVEDLAPLAELK-LVSLDLYECPVTRLKDYRSRVFGLIKTLKY 150
Query: 87 LDNVPVQPDEVRTSEE 102
LD + +E S++
Sbjct: 151 LDKTDAEGNERPESDD 166
>At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein
contains tubulin-tyrosine ligase family domain,
Pfam:PF03133
Length = 867
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 48 IRHLRHLPDLTNLWLDENPCTQHPEYRMT--VLRNLPNLE 85
I+ + +L LWL++NP Q E +M +L+ P+LE
Sbjct: 200 IQEIVKFKNLKALWLNDNPVLQKSERQMADEILQGCPSLE 239
>At5g61240.1 68418.m07681 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-0B
[Lycopersicon esculentum] gi|3894387|gb|AAC78593
Length = 380
Score = 27.9 bits (59), Expect = 1.3
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 30 RRLRELYIRKNEIRELNEI-RHLRHLPDLTNLWLDENPCTQHPEYRMTVLRNLPNLEKLD 88
+RL LY+ N + EI + L LP+L L+L EN + L+NL +L+ +
Sbjct: 199 KRLTHLYLSFNSFK--GEIPKELAALPELRYLYLQENRLIGRIPAELGTLQNLRHLDVGN 256
Query: 89 N 89
N
Sbjct: 257 N 257
>At4g15215.1 68417.m02332 ABC transporter family protein similar to
PDR5-like ABC transporter [Spirodela polyrhiza]
GI:1514643; contains Pfam profile PF00005: ABC
transporter
Length = 1390
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 53 HLPDLT-NLWLDENPCTQHPEYRMTVLRNLPNLEKLDNVPVQPD 95
H+P+L+ LD + C Q RM +++ + EKL + PD
Sbjct: 223 HIPELSVRETLDFSACCQGIGSRMEIMKEISRREKLKEIVPDPD 266
>At2g45870.1 68415.m05705 expressed protein contains Pfam profile
PF05249: Uncharacterised protein family (UPF0187)
Length = 410
Score = 27.9 bits (59), Expect = 1.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 33 RELYIRKNEIRELNEIRHLRHL 54
R LY +N +R + +RHLRH+
Sbjct: 82 RSLYTHENWVRHRSSLRHLRHV 103
>At2g17050.1 68415.m01968 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1355
Score = 27.9 bits (59), Expect = 1.3
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 12 ISGSSINKIRTLGDFAGC-RRLRELYIRKNEIRELNEIRHLRHLP--DLTNLWLDENPCT 68
+SG K L +F G R L+ELY+ IRE+ HL L DL+N +N
Sbjct: 512 LSGCVEIKSTQLEEFQGFPRNLKELYLSGTGIREVTSSIHLSSLEVLDLSNCKRLQNLPM 571
Query: 69 QHPEYRMTVLRNLPNLEKLDNVPVQPDEVR 98
+ L KL N+ P ++
Sbjct: 572 GKGNLASLIKLMLSGCSKLQNIQDLPTNLK 601
>At4g19050.1 68417.m02806 mob1/phocein family protein contains Pfam
PF03637: Mob1/phocein family; contains Pfam F00560:
Leucine Rich Repeats; contains TIGRFAMS profile
TIGR01612: reticulocyte binding protein; hypothetical
protein YIL106w, Saccharomyces cerevisiae, PIR2:S48466
Length = 1405
Score = 27.5 bits (58), Expect = 1.7
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 16 SINKIRTLG--DFAGCRRLRELYIRKNEIRELNEIRHLR-HLPDLTNLWLDENPCTQHPE 72
SI K+ L D +GC +L+ + E+ L+E+ +L +L + + + +
Sbjct: 720 SIEKLTHLEVFDVSGCIKLKNINGSFGEMSYLHEVNLSETNLSELPDKISELSNLKELII 779
Query: 73 YRMTVLRNLPNLEKLDNVPV 92
+ + L+ LPNLEKL N+ +
Sbjct: 780 RKCSKLKTLPNLEKLTNLEI 799
>At3g29130.1 68416.m03647 expressed protein ; expression supported
by MPSS
Length = 185
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 41 EIRELNEIRHLRHLPDLTNLWLD 63
++ +LN +RHL+HL LT + LD
Sbjct: 63 KVEDLNSLRHLQHLIVLTLITLD 85
>At1g12220.1 68414.m01414 disease resistance protein RPS5
(CC-NBS-LRR class) / resistance to Pseudomonas syringae
protein 5 (CC-NBS-LRR class) domain signature CC-NBS-LRR
exists, suggestive of a disease resistance protein.
Identical to RPS5 (resistance to Pseudomonas syringae
protein 5)(gi:3309620)
Length = 889
Score = 27.5 bits (58), Expect = 1.7
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 18 NKIRTLGDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDEN 65
N+I + D C L L+++KN++ +++ R +P L L L EN
Sbjct: 527 NEIEEIFDSHECAALTTLFLQKNDVVKIS-AEFFRCMPHLVVLDLSEN 573
>At4g15230.1 68417.m02333 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1326
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 53 HLPDLT-NLWLDENPCTQHPEYRMTVLRNLPNLEKLDNVPVQP 94
H+P+L+ LD + C Q RM +++ + +EKL + P
Sbjct: 226 HIPELSVRETLDFSACCQGIGSRMEIMKEISRMEKLQEIIPDP 268
>At3g62980.1 68416.m07075 transport inhibitor response 1 (TIR1)
(FBL1) E3 ubiquitin ligase SCF complex F-box subunit;
identical to transport inhibitor response 1 GI:2352492
from [Arabidopsis thaliana]
Length = 594
Score = 27.1 bits (57), Expect = 2.3
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 27 AGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTVLRNL----P 82
A CR L+EL +R++++ +++ L H PD + N E + L L P
Sbjct: 153 ATCRNLKELDLRESDVDDVSG-HWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCP 211
Query: 83 NLEKL 87
NL+ L
Sbjct: 212 NLKSL 216
>At1g12820.1 68414.m01489 transport inhibitor response protein,
putative E3 ubiquitin ligase SCF complex F-box subunit;
similar to transport inhibitor response 1 GI:2352492
from [Arabidopsis thaliana]
Length = 577
Score = 27.1 bits (57), Expect = 2.3
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 27 AGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTVLRNL----P 82
A CR LREL +++NEI + + + L PD + N E + L L P
Sbjct: 148 ANCRHLRELDLQENEIDD-HRGQWLNCFPDSCTTLMSLNFACLKGETNVAALERLVARSP 206
Query: 83 NLEKL 87
NL+ L
Sbjct: 207 NLKSL 211
>At1g15740.1 68414.m01888 leucine-rich repeat family protein
Length = 585
Score = 26.6 bits (56), Expect = 3.1
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 13 SGSSINKIRTLGDFAGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPE 72
SGS I L GC L L + + HL L +LT+L N
Sbjct: 146 SGSDITD-SGLVSLKGCTNLESLNFNFCDQISNRGLVHLSGLSNLTSLSFRRNAAIT--A 202
Query: 73 YRMTVLRNLPNLEKLD 88
M L NL NL+KLD
Sbjct: 203 QGMRALSNLVNLKKLD 218
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 25.8 bits (54), Expect = 5.3
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 53 HLPDLT-NLWLDENPCTQHPEYRMTVLRNLPNLEKLDNVPVQPD 95
H+P+L+ LD + C Q R+ +++ + EKL + PD
Sbjct: 221 HIPELSVRETLDFSGCFQGAGSRLEMMKEISRREKLKGIVPDPD 264
>At3g26810.1 68416.m03354 transport inhibitor response protein,
putative E3 ubiquitin ligase SCF complex F-box subunit;
similar to transport inhibitor response 1 GI:2352492
from [Arabidopsis thaliana]
Length = 575
Score = 25.8 bits (54), Expect = 5.3
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 27 AGCRRLRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTVLRNL----P 82
A CR LR+L +++NEI + + + L PD + N E + L L P
Sbjct: 148 ANCRHLRDLDLQENEIDD-HRGQWLSCFPDTCTTLVTLNFACLEGETNLVALERLVARSP 206
Query: 83 NLEKL 87
NL+ L
Sbjct: 207 NLKSL 211
>At3g15410.1 68416.m01955 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596;
identical to leucine-rich repeat protein [Arabidopsis
thaliana] gi|2760084|emb|CAA76000
Length = 584
Score = 25.8 bits (54), Expect = 5.3
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 32 LRELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTVLRNLPNLE 85
L+ L + +N+I++ L+ LP+L L LD NP Q P V+ L L+
Sbjct: 406 LQTLILSRNKIKDWPGAI-LKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILD 458
>At2g46190.1 68415.m05743 hypothetical protein
Length = 210
Score = 25.8 bits (54), Expect = 5.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 59 NLWLDENPCTQHPEYRMTVLR 79
N W D+ PC + +YR + LR
Sbjct: 155 NYWEDQRPCDLNVDYRHSYLR 175
>At5g08430.1 68418.m00993 SWIB complex BAF60b domain-containing
protein / plus-3 domain-containing protein / GYF
domain-containing protein similar to CPRF interacting
protein [Petroselinum crispum] GI:9588690; contains Pfam
profiles PF02201: BAF60b domain of the SWIB complex,
PF03126: Plus-3 domain, PF02213: GYF domain; contains
non-conensus AT-AC splice sites at intron 5
Length = 553
Score = 25.4 bits (53), Expect = 7.1
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 33 RELYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPEYRMTVLRNLPNLEKLDNVPV 92
RE+ + K I NE R L + +LD+ Q+P+ + +LR +P E + V
Sbjct: 281 REIELLKRLIDRANEKGWRRELSE----YLDKRELLQNPDEQARLLREVP--EVIGEELV 334
Query: 93 QPDEVRTSE 101
Q EV + E
Sbjct: 335 QNPEVSSPE 343
>At4g15475.1 68417.m02365 F-box family protein (FBL4) 99.7%
identical to F-box protein family, AtFBL4 (GP:21536497)
[Arabidopsis thaliana]; similar to grr1 GI:2407790 from
[Glycine max]
Length = 610
Score = 25.4 bits (53), Expect = 7.1
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 15 SSINKIRTLGDFAGCRRLRELYIRK-NEIRELNEIRHLRHLPDLTNLWL 62
S I I GCR L++L+IR+ EI I +H LT L L
Sbjct: 409 SGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSL 457
>At3g61320.1 68416.m06862 expressed protein contains Pfam PF05249:
Uncharacterised protein family (UPF0187)
Length = 410
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 28 GCRRLRELYIRKNEIRELNEIRHLRHL 54
G ++ R LY + + + +RH+RHL
Sbjct: 77 GMQQKRSLYTHEKWVEHRSSLRHVRHL 103
>At3g15490.1 68416.m01964 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 211
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 49 RHLRHLPDLTNLWLDENPCTQHPEYRM---TVLRNLPNLEKLDNVPVQPDEVR 98
R+ LP + DE + + + + T+L+N+ +L+ +NV + P+E +
Sbjct: 17 RYSEALPKAKQFYEDERRLSAYDQVELFCTTILQNISSLKYENNVDLLPEETK 69
>At2g26290.1 68415.m03155 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821
Length = 424
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 68 TQHPEYRMTVLRNLPNLEKLDNVPVQPDEVRTSEE 102
+QHP+YR T+ + LE + V ++ + ++E
Sbjct: 349 SQHPKYRPTMCEVVKVLESIQEVDIRKHDGNNNKE 383
>At1g79140.1 68414.m09228 expressed protein
Length = 311
Score = 25.4 bits (53), Expect = 7.1
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 26 FAGCRRLRELYIRKNEIRELNEIRHLRHLP-DLTNL-WLDENPCTQHPEYRMTVLRNLPN 83
FA ++E + KNE R+LN R LP + N+ +D ++ + T+LR++
Sbjct: 215 FADFSLVKESFEPKNESRKLNNKRKRESLPEEAKNVPEIDMVKLSKKLKENFTILRDIKE 274
Query: 84 LEKLDNVPVQPDE 96
E++ +Q +E
Sbjct: 275 DERVRMELLQSEE 287
>At1g71440.1 68414.m08253 tubulin folding cofactor E / Pfifferling
(PFI) almost identical to tubulin folding cofactor E
(Pfifferling; PFI) GI:20514267 from [Arabidopsis
thaliana]; identical to cDNA tubulin folding cofactor E,
GI:20514266
Length = 531
Score = 25.4 bits (53), Expect = 7.1
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 35 LYIRKNEIRELNEIRHLRHLPDLTNLWLDENPCTQHPE---YRMTVLRNLPNLEKLDNVP 91
L + N I +L + L P L ++ L ENP + R ++ L ++ L+
Sbjct: 324 LLLGANNIGDLASVDALNGFPQLVDIRLSENPISDPVRGGVPRFVLVARLTKVQVLNGSE 383
Query: 92 VQPDEVRTSE 101
V+ E + SE
Sbjct: 384 VRAREKKDSE 393
>At4g33330.1 68417.m04740 glycogenin glucosyltransferase
(glycogenin)-related similar to glycogenin
glucosyltransferase (glycogenin-1) (EC 2.4.1.186) from
Homo sapiens [SP|P46976], Mus musculus [SP|Q9R062],
Oryctolagus cuniculus [GI:165513]; contains Pfam profile
PF01501: Glycosyl transferase family 8
Length = 593
Score = 25.0 bits (52), Expect = 9.3
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 56 DLTNLWLDENPCTQHPEYRMTVLRNLPNLEKLDNVPVQ 93
DL W+DE T+ P + + +LEKLD V V+
Sbjct: 143 DLFPEWIDEEEETEVPTCPEIPMPDFESLEKLDLVVVK 180
>At4g18050.1 68417.m02686 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter; similar to
multidrug-resistant protein CjMDR1 GI:14715462 from
[Coptis japonica]
Length = 1281
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/44 (22%), Positives = 25/44 (56%)
Query: 6 YYKDPKISGSSINKIRTLGDFAGCRRLRELYIRKNEIRELNEIR 49
Y + +++ +++ IRT+ F ++ +LY +K + + N +R
Sbjct: 848 YEEASQVANDAVSSIRTVASFCAEEKVMDLYQQKCDGPKKNGVR 891
>At2g45890.1 68415.m05707 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 463
Score = 25.0 bits (52), Expect = 9.3
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 12 ISGSSINKIRTLGDFAGCRRLRELYIRKNEI--RELNEIRHL-RHLPDLTNLWLDENPCT 68
+S S N T+ F RL+ L K ++ RE+N + ++ ++ L N
Sbjct: 123 VSNSITNLYATV--FGQSLRLQPLSTEKKDLWKREMNCFMSICDYIVEVIPRSLGTNVEI 180
Query: 69 QHPEYRMTVLRNLPNLEKLDNV 90
+ R +L +LP L KLDN+
Sbjct: 181 TETKLRSDILMSLPALRKLDNM 202
>At2g23600.1 68415.m02816 hydrolase, alpha/beta fold family
protein similar to ethylene-induced esterase [Citrus
sinensis] GI:14279437, polyneuridine aldehyde esterase
[Rauvolfia serpentina] GI:6651393; contains Pfam
profile PF00561: hydrolase, alpha/beta fold family
Length = 263
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 56 DLTNLWLDENPCTQHPEYRMTVLRNLPNLEKL 87
D T D + C Q+ E M ++ +LPN EK+
Sbjct: 48 DTTRSITDISTCEQYSEPLMQLMTSLPNDEKV 79
>At2g18870.1 68415.m02200 hypothetical protein contains 1
transmembrane domain; tandem duplication of fibronectin
type III domain protein (GI:3004551)
(TIGR_Ath1:At2g18880) [Arabidopsis thaliana]
Length = 239
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 79 RNLPNLEKLDNVPVQPDEVRTSEE 102
R+L + K +N PVQP E T +
Sbjct: 53 RHLSSYGKRNNTPVQPSETETKSQ 76
>At1g78230.1 68414.m09116 leucine-rich repeat family protein
Length = 676
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 16 SINKIRTLGD-FAGCRRLRELYIRKNEIRELNEIRHLRHL 54
S N+I +G + C ++ELY+ N+I + + L L
Sbjct: 498 SYNRISRIGQGLSNCTLIKELYLAGNKISNVEGLHRLLKL 537
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.138 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,633,598
Number of Sequences: 28952
Number of extensions: 98852
Number of successful extensions: 319
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 286
Number of HSP's gapped (non-prelim): 57
length of query: 102
length of database: 12,070,560
effective HSP length: 70
effective length of query: 32
effective length of database: 10,043,920
effective search space: 321405440
effective search space used: 321405440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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