Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001354-TA|BGIBMGA001354-PA|undefined
         (260 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   2.3  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.3  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
          protein 11 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 68 EESAISPWGGEIRPHSPARLHRE 90
          E+   +P G E++ H P  LH E
Sbjct: 52 EKGKCTPDGAELKRHLPDALHTE 74


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 189 VSLALLRNACKQGGWGG 205
           +++ LL   CK GGW G
Sbjct: 1   MTIQLLSLICKFGGWMG 17


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)

Query: 43  DGDSCGVDINEW 54
           DG+ C + IN W
Sbjct: 514 DGNDCSLGINPW 525


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.130    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,258
Number of Sequences: 317
Number of extensions: 2026
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 3
length of query: 260
length of database: 114,650
effective HSP length: 56
effective length of query: 204
effective length of database: 96,898
effective search space: 19767192
effective search space used: 19767192
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)