GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001354-TA|BGIBMGA001354-PA|undefined
         (260 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   3.8  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    23   6.7  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)

Query: 10   VPEKMLRERASSAENWQN 27
            VPE +L     S ENW N
Sbjct: 1048 VPETLLEHMLQSPENWSN 1065


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate
          transporter protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 27 NSDHQVNEEEIWKDAVDGDSCGVDINEWFGDNQAW 61
          +++ Q   E+  +   +G + G DIN    DN  W
Sbjct: 2  DTERQCAPEQPTESKPEGKARGADINYGIDDNPPW 36


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.130    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 260,589
Number of Sequences: 2123
Number of extensions: 9369
Number of successful extensions: 30
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 2
length of query: 260
length of database: 516,269
effective HSP length: 63
effective length of query: 197
effective length of database: 382,520
effective search space: 75356440
effective search space used: 75356440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)