GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001354-TA|BGIBMGA001354-PA|undefined
         (260 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M35672-1|AAA51981.1|  291|Homo sapiens F9 protein.                     31   4.1  
M11309-1|AAA52023.1|  461|Homo sapiens F9 protein.                     31   4.1  
K02402-1|AAB59620.1|  461|Homo sapiens factor IX protein.              31   4.1  
K02053-1|AAA56822.1|  461|Homo sapiens protein ( Human factor IX...    31   4.1  
J00137-1|AAA52763.1|  461|Homo sapiens F9 protein.                     31   4.1  
J00136-1|AAA98726.1|  462|Homo sapiens factor IX protein.              31   4.1  
BC109215-1|AAI09216.1|  461|Homo sapiens F9 protein protein.           31   4.1  
BC109214-1|AAI09215.1|  461|Homo sapiens F9 protein protein.           31   4.1  
AL033403-1|CAI42103.1|  461|Homo sapiens coagulation factor IX (...    31   4.1  
AF536327-1|AAM96188.1|  461|Homo sapiens coagulation factor IX (...    31   4.1  
BC130329-1|AAI30330.1|  536|Homo sapiens arylsulfatase family, m...    31   5.4  
BC036047-1|AAH36047.1|  542|Homo sapiens ARSK protein protein.         31   5.4  
AY875939-1|AAW66667.1|  536|Homo sapiens arylsulfatase K protein.      31   5.4  
AY358596-1|AAQ88959.1|  536|Homo sapiens Bone Rel Sulphatase pro...    31   5.4  
AL832711-1|CAD38634.1|  483|Homo sapiens hypothetical protein pr...    31   5.4  
M88468-1|AAB59362.1|  396|Homo sapiens mevalonate kinase protein.      30   9.4  
BC016140-1|AAH16140.1|  396|Homo sapiens MVK protein protein.          30   9.4  
AF217535-1|AAF82407.1|  396|Homo sapiens mevalonate kinase protein.    30   9.4  
AB209722-1|BAD92959.1|  421|Homo sapiens mevalonate kinase varia...    30   9.4  

>M35672-1|AAA51981.1|  291|Homo sapiens F9 protein.
          Length = 291

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 3  ETFVCNDVPEKMLRERASSAENWQNSDHQVNEEEIWKDAVDGDSC 47
          E FV  ++  + + E+ S  E  +  ++     E WK  VDGD C
Sbjct: 18 EEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYVDGDQC 62


>M11309-1|AAA52023.1|  461|Homo sapiens F9 protein.
          Length = 461

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 3  ETFVCNDVPEKMLRERASSAENWQNSDHQVNEEEIWKDAVDGDSC 47
          E FV  ++  + + E+ S  E  +  ++     E WK  VDGD C
Sbjct: 53 EEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYVDGDQC 97


>K02402-1|AAB59620.1|  461|Homo sapiens factor IX protein.
          Length = 461

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 3  ETFVCNDVPEKMLRERASSAENWQNSDHQVNEEEIWKDAVDGDSC 47
          E FV  ++  + + E+ S  E  +  ++     E WK  VDGD C
Sbjct: 53 EEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYVDGDQC 97


>K02053-1|AAA56822.1|  461|Homo sapiens protein ( Human factor IX
          gene, exons 7 and 8. ).
          Length = 461

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 3  ETFVCNDVPEKMLRERASSAENWQNSDHQVNEEEIWKDAVDGDSC 47
          E FV  ++  + + E+ S  E  +  ++     E WK  VDGD C
Sbjct: 53 EEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYVDGDQC 97


>J00137-1|AAA52763.1|  461|Homo sapiens F9 protein.
          Length = 461

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 3  ETFVCNDVPEKMLRERASSAENWQNSDHQVNEEEIWKDAVDGDSC 47
          E FV  ++  + + E+ S  E  +  ++     E WK  VDGD C
Sbjct: 53 EEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYVDGDQC 97


>J00136-1|AAA98726.1|  462|Homo sapiens factor IX protein.
          Length = 462

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 3  ETFVCNDVPEKMLRERASSAENWQNSDHQVNEEEIWKDAVDGDSC 47
          E FV  ++  + + E+ S  E  +  ++     E WK  VDGD C
Sbjct: 53 EEFVQGNLERECMEEKCSFEEPREVFENTEKTTEFWKQYVDGDQC 97


>BC109215-1|AAI09216.1|  461|Homo sapiens F9 protein protein.
          Length = 461

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 3  ETFVCNDVPEKMLRERASSAENWQNSDHQVNEEEIWKDAVDGDSC 47
          E FV  ++  + + E+ S  E  +  ++     E WK  VDGD C
Sbjct: 53 EEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYVDGDQC 97


>BC109214-1|AAI09215.1|  461|Homo sapiens F9 protein protein.
          Length = 461

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 3  ETFVCNDVPEKMLRERASSAENWQNSDHQVNEEEIWKDAVDGDSC 47
          E FV  ++  + + E+ S  E  +  ++     E WK  VDGD C
Sbjct: 53 EEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYVDGDQC 97


>AL033403-1|CAI42103.1|  461|Homo sapiens coagulation factor IX
          (plasma thromboplastic component, Christmas disease,
          hemo protein.
          Length = 461

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 3  ETFVCNDVPEKMLRERASSAENWQNSDHQVNEEEIWKDAVDGDSC 47
          E FV  ++  + + E+ S  E  +  ++     E WK  VDGD C
Sbjct: 53 EEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYVDGDQC 97


>AF536327-1|AAM96188.1|  461|Homo sapiens coagulation factor IX
          (plasma thromboplastic component, Christmas disease,
          hemo protein.
          Length = 461

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 3  ETFVCNDVPEKMLRERASSAENWQNSDHQVNEEEIWKDAVDGDSC 47
          E FV  ++  + + E+ S  E  +  ++     E WK  VDGD C
Sbjct: 53 EEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYVDGDQC 97


>BC130329-1|AAI30330.1|  536|Homo sapiens arylsulfatase family,
           member K protein.
          Length = 536

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 6/51 (11%)

Query: 28  SDHQVNEEEI--WKDAVDGDSCGVDIN-EWFGDNQAWCHQPRAEESAISPW 75
           S HQ N+E+   WK ++  +   V  N  W   +Q W  +PR  E+AI  W
Sbjct: 479 SVHQYNKEQFIKWKQSIGQNYSNVIANLRW---HQDWQKEPRKYENAIDQW 526


>BC036047-1|AAH36047.1|  542|Homo sapiens ARSK protein protein.
          Length = 542

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 6/51 (11%)

Query: 28  SDHQVNEEEI--WKDAVDGDSCGVDIN-EWFGDNQAWCHQPRAEESAISPW 75
           S HQ N+E+   WK ++  +   V  N  W   +Q W  +PR  E+AI  W
Sbjct: 485 SVHQYNKEQFIKWKQSIGQNYSNVIANLRW---HQDWQKEPRKYENAIDQW 532


>AY875939-1|AAW66667.1|  536|Homo sapiens arylsulfatase K protein.
          Length = 536

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 6/51 (11%)

Query: 28  SDHQVNEEEI--WKDAVDGDSCGVDIN-EWFGDNQAWCHQPRAEESAISPW 75
           S HQ N+E+   WK ++  +   V  N  W   +Q W  +PR  E+AI  W
Sbjct: 479 SVHQYNKEQFIKWKQSIGQNYSNVIANLRW---HQDWQKEPRKYENAIDQW 526


>AY358596-1|AAQ88959.1|  536|Homo sapiens Bone Rel Sulphatase
           protein.
          Length = 536

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 6/51 (11%)

Query: 28  SDHQVNEEEI--WKDAVDGDSCGVDIN-EWFGDNQAWCHQPRAEESAISPW 75
           S HQ N+E+   WK ++  +   V  N  W   +Q W  +PR  E+AI  W
Sbjct: 479 SVHQYNKEQFIKWKQSIGQNYSNVIANLRW---HQDWQKEPRKYENAIDQW 526


>AL832711-1|CAD38634.1|  483|Homo sapiens hypothetical protein
           protein.
          Length = 483

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 6/51 (11%)

Query: 28  SDHQVNEEEI--WKDAVDGDSCGVDIN-EWFGDNQAWCHQPRAEESAISPW 75
           S HQ N+E+   WK ++  +   V  N  W   +Q W  +PR  E+AI  W
Sbjct: 426 SVHQYNKEQFIKWKQSIGQNYSNVIANLRW---HQDWQKEPRKYENAIDQW 473


>M88468-1|AAB59362.1|  396|Homo sapiens mevalonate kinase protein.
          Length = 396

 Score = 29.9 bits (64), Expect = 9.4
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 51  INEWFGDNQAWCH-QPRAEESAISPWGGEIRPH 82
           IN+W    +   H  P   ++A+S WGG +R H
Sbjct: 185 INKWAFQGERMIHGNPSGVDNAVSTWGGALRYH 217


>BC016140-1|AAH16140.1|  396|Homo sapiens MVK protein protein.
          Length = 396

 Score = 29.9 bits (64), Expect = 9.4
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 51  INEWFGDNQAWCH-QPRAEESAISPWGGEIRPH 82
           IN+W    +   H  P   ++A+S WGG +R H
Sbjct: 185 INKWAFQGERMIHGNPSGVDNAVSTWGGALRYH 217


>AF217535-1|AAF82407.1|  396|Homo sapiens mevalonate kinase protein.
          Length = 396

 Score = 29.9 bits (64), Expect = 9.4
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 51  INEWFGDNQAWCH-QPRAEESAISPWGGEIRPH 82
           IN+W    +   H  P   ++A+S WGG +R H
Sbjct: 185 INKWAFQGERMIHGNPSGVDNAVSTWGGALRYH 217


>AB209722-1|BAD92959.1|  421|Homo sapiens mevalonate kinase variant
           protein.
          Length = 421

 Score = 29.9 bits (64), Expect = 9.4
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 51  INEWFGDNQAWCH-QPRAEESAISPWGGEIRPH 82
           IN+W    +   H  P   ++A+S WGG +R H
Sbjct: 210 INKWAFQGERMIHGNPSGVDNAVSTWGGALRYH 242


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.130    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,930,022
Number of Sequences: 224733
Number of extensions: 1355054
Number of successful extensions: 5988
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 5978
Number of HSP's gapped (non-prelim): 19
length of query: 260
length of database: 73,234,838
effective HSP length: 88
effective length of query: 172
effective length of database: 53,458,334
effective search space: 9194833448
effective search space used: 9194833448
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)