GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001354-TA|BGIBMGA001354-PA|undefined
         (260 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3102|AAS65192.1|  780|Drosophila melanogaster CG33334-P...    30   2.8  
AY094828-1|AAM11181.1| 1765|Drosophila melanogaster LD40380p pro...    29   4.9  
AY089325-1|AAL90063.1|  263|Drosophila melanogaster AT13643p pro...    29   4.9  
AE014297-3524|AAF56278.2| 2232|Drosophila melanogaster CG31132-P...    29   4.9  
BT021312-1|AAX33460.1| 1215|Drosophila melanogaster RE14947p pro...    29   8.5  
AE014134-2679|AAN10933.1| 1170|Drosophila melanogaster CG12455-P...    29   8.5  
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P...    29   8.5  

>AE014297-3102|AAS65192.1|  780|Drosophila melanogaster CG33334-PA
           protein.
          Length = 780

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 15  LRERASSAENWQNSDHQVNEEEIWKDAVDGDSCGVDINEWFGDNQAWCHQPRAEESA 71
           L + AS  +N  +S       ++ K A +G S  + IN+  GD + W     A+ +A
Sbjct: 56  LEDFASDFDNGNDSSGDEERLKLAKTAANGRSDNLYINKMVGDGRTWTFSSAADRNA 112


>AY094828-1|AAM11181.1| 1765|Drosophila melanogaster LD40380p protein.
          Length = 1765

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 2    TETFVCNDVPEKMLRERASSAENWQNSDHQVNEEEIWKDAVDGDSCGVDINEWFGDNQAW 61
            T +   ++V  + LR RAS A N  + DH+  E     +  DG S      +   D+ + 
Sbjct: 1548 TNSNSASNVVTRRLRGRASQA-NSHDEDHEEEEAAASDEGTDGGSSSQSYEDEDEDSDSE 1606

Query: 62   CHQPRAEESAISPWGGEIRPHSPAR 86
             +QP    S +SP  G  RP   A+
Sbjct: 1607 DNQPLT--SYVSPSNG--RPRRKAK 1627


>AY089325-1|AAL90063.1|  263|Drosophila melanogaster AT13643p
           protein.
          Length = 263

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 2   TETFVCNDVPEKMLRERASSAENWQNSDHQVNEEEIWKDAVDGDSCGVDINEWFGDNQAW 61
           T +   ++V  + LR RAS A N  + DH+  E     +  DG S      +   D+ + 
Sbjct: 81  TNSNSASNVVTRRLRGRASQA-NSHDEDHEEEEAAASDEGTDGGSSSQSYEDEDEDSDSE 139

Query: 62  CHQPRAEESAISPWGGEIRPHSPAR 86
            +QP    S +SP  G  RP   A+
Sbjct: 140 DNQPLT--SYVSPSNG--RPRRKAK 160


>AE014297-3524|AAF56278.2| 2232|Drosophila melanogaster CG31132-PA
            protein.
          Length = 2232

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 2    TETFVCNDVPEKMLRERASSAENWQNSDHQVNEEEIWKDAVDGDSCGVDINEWFGDNQAW 61
            T +   ++V  + LR RAS A N  + DH+  E     +  DG S      +   D+ + 
Sbjct: 2015 TNSNSASNVVTRRLRGRASQA-NSHDEDHEEEEAAASDEGTDGGSSSQSYEDEDEDSDSE 2073

Query: 62   CHQPRAEESAISPWGGEIRPHSPAR 86
             +QP    S +SP  G  RP   A+
Sbjct: 2074 DNQPLT--SYVSPSNG--RPRRKAK 2094


>BT021312-1|AAX33460.1| 1215|Drosophila melanogaster RE14947p
           protein.
          Length = 1215

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 11  PEKMLRERASSAEN-WQNSDHQVNEEEIWKDAVDGDSCGVDINEWFGDNQAWCHQ 64
           PE  LRE  +  +N W+ S+    +E  W D  D  +CG    +  GD+  +C++
Sbjct: 724 PEAELREFLAKMQNDWKWSEQYAEDESDWDDK-DDLNCG---RKTLGDDAYYCNK 774


>AE014134-2679|AAN10933.1| 1170|Drosophila melanogaster CG12455-PB,
           isoform B protein.
          Length = 1170

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 11  PEKMLRERASSAEN-WQNSDHQVNEEEIWKDAVDGDSCGVDINEWFGDNQAWCHQ 64
           PE  LRE  +  +N W+ S+    +E  W D  D  +CG    +  GD+  +C++
Sbjct: 679 PEAELREFLAKMQNDWKWSEQYAEDESDWDDK-DDLNCG---RKTLGDDAYYCNK 729


>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
           isoform A protein.
          Length = 2190

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 11  PEKMLRERASSAEN-WQNSDHQVNEEEIWKDAVDGDSCGVDINEWFGDNQAWCHQ 64
           PE  LRE  +  +N W+ S+    +E  W D  D  +CG    +  GD+  +C++
Sbjct: 686 PEAELREFLAKMQNDWKWSEQYAEDESDWDDK-DDLNCG---RKTLGDDAYYCNK 736


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.130    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,600,798
Number of Sequences: 52641
Number of extensions: 488029
Number of successful extensions: 1276
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1275
Number of HSP's gapped (non-prelim): 7
length of query: 260
length of database: 24,830,863
effective HSP length: 83
effective length of query: 177
effective length of database: 20,461,660
effective search space: 3621713820
effective search space used: 3621713820
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)