Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001353-TA|BGIBMGA001353-PA|IPR005052|Legume-like lectin
         (280 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   5.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.8  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/15 (46%), Positives = 13/15 (86%)

Query: 101 IHDVLRDLNKKVDEV 115
           ++ V RDLN++VD++
Sbjct: 287 VNQVPRDLNREVDQI 301


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/11 (63%), Positives = 11/11 (100%)

Query: 105 LRDLNKKVDEV 115
           LRDLN++VD++
Sbjct: 291 LRDLNREVDQI 301


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/16 (43%), Positives = 13/16 (81%)

Query: 100  QIHDVLRDLNKKVDEV 115
            +I + LRDLN+K++ +
Sbjct: 1104 KIQESLRDLNRKIESL 1119


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/16 (43%), Positives = 13/16 (81%)

Query: 100  QIHDVLRDLNKKVDEV 115
            +I + LRDLN+K++ +
Sbjct: 1104 KIQESLRDLNRKIESL 1119


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.135    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,161
Number of Sequences: 317
Number of extensions: 1163
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 4
length of query: 280
length of database: 114,650
effective HSP length: 56
effective length of query: 224
effective length of database: 96,898
effective search space: 21705152
effective search space used: 21705152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)