GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001353-TA|BGIBMGA001353-PA|IPR005052|Legume-like lectin
         (280 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    23   3.0  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    23   4.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   5.3  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.2  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 150 PSMPIGRHDWDALVANNQLMIN 171
           P  P G  D DA++ + QL +N
Sbjct: 16  PQRPSGGADKDAVITSQQLEVN 37


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 74  DKDGEFDDWFESDGQRELRQIFQGQAQ 100
           D DG+ D+ F  D Q   R+  Q + Q
Sbjct: 25  DSDGQTDEGFVGDSQGFFRRSIQQKIQ 51


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query: 154 IGRHDWDALVANNQLMINTI 173
           +G HDW +    N  ++++I
Sbjct: 217 VGEHDWSSKTETNATVLHSI 236


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/12 (58%), Positives = 12/12 (100%)

Query: 104 VLRDLNKKVDEV 115
           VL+D+N++VDE+
Sbjct: 292 VLKDINRQVDEL 303


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.135    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,639
Number of Sequences: 429
Number of extensions: 1328
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 4
length of query: 280
length of database: 140,377
effective HSP length: 57
effective length of query: 223
effective length of database: 115,924
effective search space: 25851052
effective search space used: 25851052
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)