GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001352-TA|BGIBMGA001352-PA|IPR005052|Legume-like lectin,
IPR008985|Concanavalin A-like lectin/glucanase
         (206 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.43 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.0  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   7.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.3  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   9.3  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   9.3  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 102 YYMNTLTVYFHNGMTNNEQDYELCFRAENVVLPRGGHFG 140
           YY+N    +  NG+ +      L F+  N+    GG FG
Sbjct: 500 YYVNVTFPHLFNGLVDYSLWKALIFQISNLQTTFGGTFG 538


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 117 NNEQDYELCFRAEN 130
           NN  +Y +CFR  N
Sbjct: 396 NNRDEYNVCFRPRN 409


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query: 110 YFHNGMTNNEQDYEL 124
           YFH  + NN Q Y L
Sbjct: 331 YFHMDLENNVQSYSL 345


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 166 QQPVYCARQKCFENKRVREI 185
           QQP   AR+   E  RV+++
Sbjct: 82  QQPASVARRNARERNRVKQV 101


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 17  YQQSFNAIASGESVRLAPSLRSQKGAIWTKQPINFDWWEV 56
           Y QSF         +  PS    +   +TKQP    ++E+
Sbjct: 870 YGQSFTLTKGNNHDQGVPSAGPGEAGEYTKQPGMLAYYEI 909


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 167 QPVYCARQKCFENKRVREI 185
           QPV  AR+   E  RV+++
Sbjct: 50  QPVAVARRNARERNRVKQV 68


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 102 YYMNTLTVYFHNGMTNNE 119
           +++N    YFH   T+NE
Sbjct: 128 FFVNEKQSYFHIATTSNE 145


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.138    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,599
Number of Sequences: 317
Number of extensions: 1943
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 206
length of database: 114,650
effective HSP length: 54
effective length of query: 152
effective length of database: 97,532
effective search space: 14824864
effective search space used: 14824864
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 41 (20.6 bits)