GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001352-TA|BGIBMGA001352-PA|IPR005052|Legume-like lectin,
IPR008985|Concanavalin A-like lectin/glucanase
         (206 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   0.89 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   3.6  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   4.8  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              21   8.3  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query: 44  WTKQPINFDWWEVDI 58
           W K+PI  D +EVDI
Sbjct: 606 WVKKPIEQDMFEVDI 620


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 3   IRLVEVEV-RCIQLVYQQSFNAIASGESVRLAP 34
           +R V+ E  +   ++YQ +FN I S  + R++P
Sbjct: 349 LRHVQAEAEKHAAMLYQYNFNIIISEPTERISP 381


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 101 EYYMNTLTVYFHNGMTNNEQDYELC 125
           E+Y + L  YF  G   ++   +LC
Sbjct: 6   EHYRHILLFYFRKGKNASQAHKKLC 30


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)

Query: 117 NNEQDYELCFRAENVVLP 134
           +N +D+E C   +NV +P
Sbjct: 6   HNGRDFEYCPDLDNVTMP 23


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.138    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,022
Number of Sequences: 429
Number of extensions: 2323
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 4
length of query: 206
length of database: 140,377
effective HSP length: 55
effective length of query: 151
effective length of database: 116,782
effective search space: 17634082
effective search space used: 17634082
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 42 (21.0 bits)