Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001350-TA|BGIBMGA001350-PA|IPR001251|Cellular
retinaldehyde-binding/triple function, C-terminal
(507 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g69340.1 68414.m07956 appr-1-p processing enzyme family prote... 76 5e-14
At4g35750.1 68417.m05074 Rho-GTPase-activating protein-related c... 40 0.003
At3g10210.1 68416.m01222 expressed protein similar to putative p... 36 0.063
At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related... 35 0.11
At5g03670.1 68418.m00326 expressed protein 34 0.19
At1g70180.2 68414.m08076 sterile alpha motif (SAM) domain-contai... 33 0.34
At1g70180.1 68414.m08075 sterile alpha motif (SAM) domain-contai... 33 0.34
At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family... 31 1.4
At3g28770.1 68416.m03591 expressed protein 31 2.4
At3g19210.1 68416.m02438 DNA repair protein RAD54, putative simi... 31 2.4
At5g16880.3 68418.m01977 VHS domain-containing protein / GAT dom... 30 3.1
At5g16880.2 68418.m01979 VHS domain-containing protein / GAT dom... 30 3.1
At5g16880.1 68418.m01978 VHS domain-containing protein / GAT dom... 30 3.1
At4g39680.1 68417.m05614 SAP domain-containing protein contains ... 30 3.1
At4g34400.1 68417.m04886 transcriptional factor B3 family protei... 30 3.1
At4g14840.1 68417.m02281 expressed protein 30 3.1
At3g61160.2 68416.m06845 shaggy-related protein kinase beta / AS... 30 3.1
At3g61160.1 68416.m06844 shaggy-related protein kinase beta / AS... 30 3.1
At1g59990.1 68414.m06758 DEAD/DEAH box helicase, putative (RH22)... 30 3.1
At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein... 30 4.2
At3g50550.1 68416.m05528 expressed protein isoform contains a n... 30 4.2
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 30 4.2
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 30 4.2
At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp... 29 5.5
At4g36880.1 68417.m05229 cysteine proteinase, putative strong si... 29 5.5
At2g14010.1 68415.m01557 hypothetical protein and genefinder 29 5.5
At1g77580.2 68414.m09032 myosin heavy chain-related low similari... 29 5.5
At1g77580.1 68414.m09033 myosin heavy chain-related low similari... 29 5.5
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 29 5.5
At5g54920.1 68418.m06840 expressed protein 29 7.3
At5g06570.2 68418.m00742 expressed protein similar to PrMC3 [Pin... 29 7.3
At5g06570.1 68418.m00741 expressed protein similar to PrMC3 [Pin... 29 7.3
At3g06020.1 68416.m00687 expressed protein ; expression supporte... 29 7.3
At2g22795.1 68415.m02704 expressed protein 29 7.3
At5g66840.1 68418.m08427 SAP domain-containing protein contains ... 29 9.6
At4g13430.1 68417.m02096 aconitase family protein / aconitate hy... 29 9.6
At3g59150.1 68416.m06594 F-box family protein contains F-box dom... 29 9.6
At2g36380.1 68415.m04464 ABC transporter family protein related ... 29 9.6
At2g30280.1 68415.m03686 expressed protein 29 9.6
At1g56460.1 68414.m06493 PAPA-1-like family protein / zinc finge... 29 9.6
>At1g69340.1 68414.m07956 appr-1-p processing enzyme family protein
contains Pfam domain PF01661: Appr-1-p processing enzyme
family
Length = 562
Score = 76.2 bits (179), Expect = 5e-14
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 356 RVLSHGGYDAHGAALIVFSACHLPDNSRPDYTYVMDNLFLYVIWTLERLVTEEYVLVYLH 415
+++ GG D G ++V H ++ LYVI E ++ + Y +VY H
Sbjct: 398 KIVYRGGVDTEGHPVMVVVGAHFLLRCLD-----LERFVLYVIKEFEPVIQKPYSIVYFH 452
Query: 416 GSAGRRRLPGFHWLHECYKLIDRRLRKSLKHLYLVHPTFWLKSFVILTKPFVSSKFFKKL 475
+A + P W+ +++ R+ +++L+ +Y++HPTF LK+ ++ + FV + +KK+
Sbjct: 453 SAASLQVQPDLGWMKRLEQILGRKHQRNLQAIYVLHPTFHLKATILTMQFFVDNVVWKKV 512
Query: 476 SYVRNLQELMQRVPVEPNAIPETV 499
Y L +L + VP E IP+ V
Sbjct: 513 VYADRLLQLFKYVPREQLTIPDFV 536
>At4g35750.1 68417.m05074 Rho-GTPase-activating protein-related
contains weak similarity to Rho-GTPase-activating
protein 1 (GTPase-activating protein rhoOGAP)
(Rho-related small GTPase protein activator) (CDC42
GTPase-activating protein) (p50-rhoGAP)
(Swiss-Prot:Q07960) [Homo sapiens]
Length = 202
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 403 RLVTEEYVLVYLHGSAGR-RRLPGFHWLHECYKLIDRRLRKSLKHLYLVHPTFWLKSFVI 461
RL + + ++Y+H R PG L Y I +R +L+ +Y +HP + F+
Sbjct: 61 RLGRKPFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLA 120
Query: 462 LTKPFV-SSKFFKKLSYVRNLQELMQRVPVEPNAIPETV 499
F+ S + KL Y+ + L + V +PE V
Sbjct: 121 TCGRFLFSGGLYGKLRYISRVDYLWEHVRRNEIEMPEFV 159
>At3g10210.1 68416.m01222 expressed protein similar to putative
protein GB:CAA20045 [Arabidopsis thaliana]
Length = 237
Score = 35.9 bits (79), Expect = 0.063
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 411 LVYLHGSAGRR-RLPGFHWLHECYKLIDRRLRKSLKHLYLVHPTFWLKSFVI-LTKPFVS 468
LVY+H + + PG L Y+ + ++ L+ +Y +HP + + L + +S
Sbjct: 104 LVYMHSTVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLS 163
Query: 469 SKFFKKLSYVRNLQELMQRVPVEPNAIPETVKLYE 503
+ K+ YV LQ L + + IP+ VK ++
Sbjct: 164 GGLYWKIKYVSRLQYLWEDIKKGEVEIPDFVKNHD 198
>At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related
similar to storekeeper protein GI:14268476 [Solanum
tuberosum]
Length = 328
Score = 35.1 bits (77), Expect = 0.11
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 207 TPKCNIKAVDVTPKEEYHSGVAEWCESPSHLRSIPNFELPIEMSSAVGMRNPPEDDRCSL 266
TP K+ DV + SGVA + PS + S + P+E ++ ED+ S
Sbjct: 38 TPSTVKKSSDVASTSKKLSGVASPAKKPSGVTS--PVKKPLEAVASTSSEEEEEDEPSS- 94
Query: 267 DSVSGCSMESEEEPVELDNARSCPDPRSE 295
DS SG ES+ E + A + P +E
Sbjct: 95 DSESGSESESDTEAEPMTLAAAAPSSSNE 123
>At5g03670.1 68418.m00326 expressed protein
Length = 516
Score = 34.3 bits (75), Expect = 0.19
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 230 WCESPSH--LRSIPN---FELPIEMSSAVGMRNP---PEDDRCSLDSVSGCSMESEEEPV 281
+CESP H L+++P+ F P S A R+ E + ++ + ME EEE
Sbjct: 255 FCESPFHFVLQTMPSNGGFRTPNFSSPAASPRHDCHEMEKESYEVEKLKKLEMEEEEEEK 314
Query: 282 ELDNARSCPDPRSEDDDDTKRSKSTNTVS 310
E + S DP +DDD+ N S
Sbjct: 315 EQSSPVSVLDPPFQDDDEDIHMDDNNIPS 343
>At1g70180.2 68414.m08076 sterile alpha motif (SAM)
domain-containing protein contains Pfam profile PF00536:
SAM domain (Sterile alpha motif)
Length = 460
Score = 33.5 bits (73), Expect = 0.34
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Query: 244 ELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRS 303
+L ++ R D+ C++D S SE+ P LD +PR ++ +
Sbjct: 83 DLRFKLMQKNAQRRAQSDEGCTMDLREKLS-RSEQPPRSLDTRPRMAEPRDRPLSSSRTA 141
Query: 304 KSTNTVSESSDLIPEYSAADELRRERGWRSV-SSPAASPHR 343
+ ++ + SS P + A ++LRR R V +S SP R
Sbjct: 142 RGSSQMISSSSSHPAW-ALEDLRRRSPERFVDTSRGRSPPR 181
>At1g70180.1 68414.m08075 sterile alpha motif (SAM)
domain-containing protein contains Pfam profile PF00536:
SAM domain (Sterile alpha motif)
Length = 456
Score = 33.5 bits (73), Expect = 0.34
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Query: 244 ELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRS 303
+L ++ R D+ C++D S SE+ P LD +PR ++ +
Sbjct: 83 DLRFKLMQKNAQRRAQSDEGCTMDLREKLS-RSEQPPRSLDTRPRMAEPRDRPLSSSRTA 141
Query: 304 KSTNTVSESSDLIPEYSAADELRRERGWRSV-SSPAASPHR 343
+ ++ + SS P + A ++LRR R V +S SP R
Sbjct: 142 RGSSQMISSSSSHPAW-ALEDLRRRSPERFVDTSRGRSPPR 181
>At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At3g25690,
At5g61090 [Arabidopsis thaliana]
Length = 681
Score = 31.5 bits (68), Expect = 1.4
Identities = 35/164 (21%), Positives = 60/164 (36%), Gaps = 2/164 (1%)
Query: 189 ETLNDNSAIHFEKFSSQSTPKCNIKAVDVTPKEEYHSGVAEWCESPSHLRSIPNFELPIE 248
ET + + E S++S+PK ++ + S + S LRS P P
Sbjct: 273 ETEDHSETTTSETDSTESSPKEDVPPPPPLTSPQTPSPTVSTFNTKSSLRSQPPPPPPSP 332
Query: 249 MSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNT 308
A PP + S +S C S+ DNA S P P + K+T+
Sbjct: 333 EHKAPAPPPPPPMSKAS-ESGEFCQF-SKTHSTNGDNAPSMPAPPAPPGSGRSLKKATSK 390
Query: 309 VSESSDLIPEYSAADELRRERGWRSVSSPAASPHRALCDMKVIE 352
+ S+ + Y A RG + A+ ++ + ++
Sbjct: 391 LRRSAQIANLYWALKGKLEGRGVEGKTKKASKGQNSVAEKSPVK 434
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 256 RNPPEDDRCSLDSVSGCSMES-EEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSD 314
+N P+DD+ + SG ES E E E +N + D D++K S++
Sbjct: 1231 KNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADS 1290
Query: 315 LIPEYSAADELRRE 328
+ +DE + E
Sbjct: 1291 HSDSQADSDESKNE 1304
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 256 RNPPEDDRCSLDSVSGCSMES-EEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSD 314
+N P+DD+ + SG ES E E E +N + D D++K S++
Sbjct: 1342 KNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADS 1401
Query: 315 LIPEYSAADELRRE 328
+ +DE + E
Sbjct: 1402 HSDSQADSDESKNE 1415
>At3g19210.1 68416.m02438 DNA repair protein RAD54, putative similar
to RAD54 GB:CAA71278 from [Drosophila melanogaster]
(Mol. Cell. Biol.(1997) 17 (10), 6097-6104)
Length = 852
Score = 30.7 bits (66), Expect = 2.4
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 277 EEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSDLIPEYSAADELRRERGWRSVSS 336
EEE E+ ++ C D DD++ S+ N E DL ++D R+ + + + S
Sbjct: 2 EEEDEEILSSSDCDDSSDSYKDDSQDSEGENDNPECEDLAVVSLSSDADRKSKNVKDLLS 61
Query: 337 PAASPHRALCDMKVIEPYKRVLSHGGYDA----HGAALIVFSACHLPDN 381
+ +K + P++R +D HG+A I + C L D+
Sbjct: 62 NVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANI--NGCILADD 108
>At5g16880.3 68418.m01977 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate [Homo
sapiens] GI:2731383; contains Pfam profiles PF00790: VHS
domain, PF03127: GAT domain
Length = 297
Score = 30.3 bits (65), Expect = 3.1
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 227 VAEWCESPSHLRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNA 286
+ W ES S LR +P FE + A G+R P D+ SL + + + + D
Sbjct: 152 IEAWGESTSELRYLPVFEETYKSLKARGIRFPGRDNE-SLAPIFTPARSTPAPELNADLP 210
Query: 287 RSCPDPRSEDDDDTKRSKSTNTVSESSDL 315
+ +P D RS + E+ D+
Sbjct: 211 QHVHEPAHIQYDVPVRSFTAEQTKEAFDI 239
>At5g16880.2 68418.m01979 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate [Homo
sapiens] GI:2731383; contains Pfam profiles PF00790: VHS
domain, PF03127: GAT domain
Length = 407
Score = 30.3 bits (65), Expect = 3.1
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 227 VAEWCESPSHLRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNA 286
+ W ES S LR +P FE + A G+R P D+ SL + + + + D
Sbjct: 152 IEAWGESTSELRYLPVFEETYKSLKARGIRFPGRDNE-SLAPIFTPARSTPAPELNADLP 210
Query: 287 RSCPDPRSEDDDDTKRSKSTNTVSESSDL 315
+ +P D RS + E+ D+
Sbjct: 211 QHVHEPAHIQYDVPVRSFTAEQTKEAFDI 239
>At5g16880.1 68418.m01978 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate [Homo
sapiens] GI:2731383; contains Pfam profiles PF00790: VHS
domain, PF03127: GAT domain
Length = 407
Score = 30.3 bits (65), Expect = 3.1
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 227 VAEWCESPSHLRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNA 286
+ W ES S LR +P FE + A G+R P D+ SL + + + + D
Sbjct: 152 IEAWGESTSELRYLPVFEETYKSLKARGIRFPGRDNE-SLAPIFTPARSTPAPELNADLP 210
Query: 287 RSCPDPRSEDDDDTKRSKSTNTVSESSDL 315
+ +P D RS + E+ D+
Sbjct: 211 QHVHEPAHIQYDVPVRSFTAEQTKEAFDI 239
>At4g39680.1 68417.m05614 SAP domain-containing protein contains
Pfam domain PF02037: SAP domain
Length = 633
Score = 30.3 bits (65), Expect = 3.1
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Query: 244 ELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRS 303
E P+E ++VG + + + + E + LD RS D ED+ +TK+S
Sbjct: 277 EEPLEQKTSVGGGDDSNAANADMIKENNIIDAGDSEKLNLD--RSSGDESMEDEPETKQS 334
Query: 304 KSTNTVSESSDLIPEYSAADELRRERGWRSVSSPAASPH 342
+S + +S+ + E + +E R + SP H
Sbjct: 335 ESITSDDKSAKI--EMLSKEESRADMDAGKGKSPENKSH 371
>At4g34400.1 68417.m04886 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 389
Score = 30.3 bits (65), Expect = 3.1
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 112 VHKIEDEKDLSLSSIEDERATFFSPQRNTSKNNLYFTENFVTADSQILNDTLDLPPDVAR 171
V +DE+D S D TF Q + +N++ ++ D + + P VA
Sbjct: 210 VESSDDEEDEEEDSDSDYIETF--GQLDIEENSISEEDSSYAPDKEDTATASFVKPKVAN 267
Query: 172 IDKHERRKIKPKYGDMKETLNDNSAIHFE 200
+ +RK+ P + + L+D IHFE
Sbjct: 268 KVANLKRKVDPMIKNPERYLDDPKNIHFE 296
>At4g14840.1 68417.m02281 expressed protein
Length = 555
Score = 30.3 bits (65), Expect = 3.1
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 247 IEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKST 306
++M +G +P D S+ S+S S E+E PVE D R D DD K +
Sbjct: 1 MDMDQEIGQNSPGFDGE-SVVSMSNRSKETEPVPVENDYYRENGFNSDGDGDDVKVNGDR 59
Query: 307 NTVSESSDL--IPEYSAADEL 325
++ ++ + L IP S+ L
Sbjct: 60 SSFTDLNQLPAIPPASSGQGL 80
>At3g61160.2 68416.m06845 shaggy-related protein kinase beta /
ASK-beta (ASK2) identical to shaggy-related protein
kinase beta SP:O23145 GI:2569931 from [Arabidopsis
thaliana]
Length = 438
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 273 SMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSDLIPEYSAADELRRE 328
S+ S V DN PRS+ + + + ++ST T S D + +D L +E
Sbjct: 9 SIASGRNFVSSDNVGETETPRSKPNQNREETESTETTSYEKDSVSSSENSDHLPKE 64
>At3g61160.1 68416.m06844 shaggy-related protein kinase beta /
ASK-beta (ASK2) identical to shaggy-related protein
kinase beta SP:O23145 GI:2569931 from [Arabidopsis
thaliana]
Length = 431
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 273 SMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSDLIPEYSAADELRRE 328
S+ S V DN PRS+ + + + ++ST T S D + +D L +E
Sbjct: 9 SIASGRNFVSSDNVGETETPRSKPNQNREETESTETTSYEKDSVSSSENSDHLPKE 64
>At1g59990.1 68414.m06758 DEAD/DEAH box helicase, putative (RH22)
similar to RNA helicase GI:3776015 from [Arabidopsis
thaliana]; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00270: DEAD/DEAH box
helicase; matches EST OAO811-2
Length = 581
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 242 NFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVE-LDNARSCPDPRSEDDDDT 300
N P+E+ ++V + +D D S E EEE E LD+ P +E DT
Sbjct: 279 NLGRPMEIDASVPQIDLENEDDAEFDEGSISEEEDEEEEEEYLDDIAQMPSVEAEAGSDT 338
Query: 301 KR 302
K+
Sbjct: 339 KK 340
>At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 275
Score = 29.9 bits (64), Expect = 4.2
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 255 MRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKS-TNTVSESS 313
++NP + S+D + G + EEE + N ++ + RS+ RSKS + + SE+S
Sbjct: 129 LKNPKLRTKPSVDDLDGSDDDDEEERPDATNGKAEVEKRSKKSKRKHRSKSDSESDSEAS 188
>At3g50550.1 68416.m05528 expressed protein isoform contains a
non-consensus AT donor site at intron 1
Length = 95
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 260 EDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSDLI 316
EDD ++SG ES E+ N+ S D +DDD+ + + + V + + L+
Sbjct: 34 EDDEEEDRNLSGDDSESSEDDYTDSNSDSDDDDEEDDDDEEEEEEEDSLVDKVTRLL 90
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 29.9 bits (64), Expect = 4.2
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 213 KAVDVTPKEEYHSGV---AEWCESPSHLRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSV 269
K +VTP ++ SG+ + + + P+HL + + + + A D ++ V
Sbjct: 686 KDSNVTPDDDV-SGMRSPSAFFKHPTHLVTPSEILMGVSSAEASITTEDRRDRDANIQDV 744
Query: 270 SGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTN 307
+ ++E E E+ ARS + D D+T+ S N
Sbjct: 745 NNDPRDTEVEVKEISEARSTQNGEINDHDETENCTSEN 782
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 29.9 bits (64), Expect = 4.2
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 213 KAVDVTPKEEYHSGV---AEWCESPSHLRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSV 269
K +VTP ++ SG+ + + + P+HL + + + + A D ++ V
Sbjct: 721 KDSNVTPDDDV-SGMRSPSAFFKHPTHLVTPSEILMGVSSAEASITTEDRRDRDANIQDV 779
Query: 270 SGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTN 307
+ ++E E E+ ARS + D D+T+ S N
Sbjct: 780 NNDPRDTEVEVKEISEARSTQNGEINDHDETENCTSEN 817
>At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 930
Score = 29.5 bits (63), Expect = 5.5
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 243 FELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKR 302
FE+P+E + R+ PED G + EE+ L E+ KR
Sbjct: 773 FEVPME--EEIKSRSKPEDSSDKRLDRPGLKEKVEEKTSSLTLGSE------EEKSRKKR 824
Query: 303 SKSTNTVSESSDLIPEYSAADELRRER 329
KS S +DL S+ DE RR+R
Sbjct: 825 EKSPGKRSGGNDLSSSESSGDERRRKR 851
>At4g36880.1 68417.m05229 cysteine proteinase, putative strong
similarity to cysteine proteinase COT44 precursor
SP:P25251 from [Brassica napus] (Rape)
Length = 376
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 145 LYFTENFVTADSQILNDTLDLPPDVA-RIDKHERRKIKPKYGDMKETLNDNSAIHFEKFS 203
LY + + D I+ND L LP D R D+ R + +T N+N+ I ++
Sbjct: 13 LYVVVSLASGDESIINDHLQLPSDGKWRTDEEVRSIYLQWSAEHGKTNNNNNGIINDQDK 72
Query: 204 SQSTPKCNIKAVDV 217
+ K N++ +D+
Sbjct: 73 RFNIFKDNLRFIDL 86
>At2g14010.1 68415.m01557 hypothetical protein and genefinder
Length = 833
Score = 29.5 bits (63), Expect = 5.5
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 245 LPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSED---DDDTK 301
+P E NP +D ++S + S E E N ++ P P+ ++ D +
Sbjct: 504 IPDEAPQLQSPLNPDTEDTAYIESEPNITEPSMFEADENSNDKTRPHPQDDEIVSGKDEE 563
Query: 302 RSKSTNTVSESSDLIPEYSAADELRRERGWRSVSSP 337
+ + T+S++++L +AD++ ER +S P
Sbjct: 564 TTAAPPTISDAANL--SKPSADDIVSERYAERISDP 597
>At1g77580.2 68414.m09032 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 779
Score = 29.5 bits (63), Expect = 5.5
Identities = 32/160 (20%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 169 VARIDKHERRKIKPKYGDMKETLNDNSAIHFEKFSSQSTPKCNIKAVDVTPKEEYHSGVA 228
VA+++ +I+ +K+ + EK +S KCN + V+ T + E +
Sbjct: 470 VAQVENSLATEIEVLTCRIKQLEEKLEKLEVEKDELKSEVKCN-REVESTLRFELEAIAC 528
Query: 229 EWCESPSHLRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARS 288
E E + L + + +++S + +++ E+ + L + E + E ++ ++
Sbjct: 529 EKMELENKLEKLEVEKAELQISFDI-IKDKYEESQVCLQEIETKLGEIQTEMKLVNELKA 587
Query: 289 CPDPRSEDDDDTKRSKSTNTVSESSDLIPEYSAADELRRE 328
+ ++ + ++KS S D+ E A DELRR+
Sbjct: 588 EVESQTIAMEADAKTKSAKIESLEEDMRKERFAFDELRRK 627
>At1g77580.1 68414.m09033 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 629
Score = 29.5 bits (63), Expect = 5.5
Identities = 32/160 (20%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 169 VARIDKHERRKIKPKYGDMKETLNDNSAIHFEKFSSQSTPKCNIKAVDVTPKEEYHSGVA 228
VA+++ +I+ +K+ + EK +S KCN + V+ T + E +
Sbjct: 436 VAQVENSLATEIEVLTCRIKQLEEKLEKLEVEKDELKSEVKCN-REVESTLRFELEAIAC 494
Query: 229 EWCESPSHLRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARS 288
E E + L + + +++S + +++ E+ + L + E + E ++ ++
Sbjct: 495 EKMELENKLEKLEVEKAELQISFDI-IKDKYEESQVCLQEIETKLGEIQTEMKLVNELKA 553
Query: 289 CPDPRSEDDDDTKRSKSTNTVSESSDLIPEYSAADELRRE 328
+ ++ + ++KS S D+ E A DELRR+
Sbjct: 554 EVESQTIAMEADAKTKSAKIESLEEDMRKERFAFDELRRK 593
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 275 ESEEEPVELDNARSCPDPRSEDDDDTKRSKS--TNTVSESSDLIPEYSAADEL 325
ES++ P E D D +E DD SKS T E+ + +A DEL
Sbjct: 373 ESKDAPAESDAEEEAEDDDNEGDDSDNESKSEETKEAEETKEAEETDAAHDEL 425
>At5g54920.1 68418.m06840 expressed protein
Length = 517
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 270 SGCSMESEEEPVELDNARSCPDPRSED-DDDTKRSKSTNTVSESSDLIPEYS 320
S CS+++ E V+ P+P S D T+R ST S S + E S
Sbjct: 214 SSCSLDNMSERVKPIEQEKMPEPSSNGFHDATERPSSTENSSSQSTTVDENS 265
>At5g06570.2 68418.m00742 expressed protein similar to PrMC3
[Pinus radiata] GI:5487873
Length = 329
Score = 29.1 bits (62), Expect = 7.3
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 29 TVLRLQNPQTILR---FSDHDKINFNDSLIHKMSNLHL 63
TVLR ++ I + F ++ + F DS+ HK +NLHL
Sbjct: 25 TVLRSESIDLITQQIPFKNNQTVLFKDSIYHKPNNLHL 62
>At5g06570.1 68418.m00741 expressed protein similar to PrMC3
[Pinus radiata] GI:5487873
Length = 329
Score = 29.1 bits (62), Expect = 7.3
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 29 TVLRLQNPQTILR---FSDHDKINFNDSLIHKMSNLHL 63
TVLR ++ I + F ++ + F DS+ HK +NLHL
Sbjct: 25 TVLRSESIDLITQQIPFKNNQTVLFKDSIYHKPNNLHL 62
>At3g06020.1 68416.m00687 expressed protein ; expression supported
by MPSS
Length = 300
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 258 PPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSDLIP 317
PP +RC D +GC + + +D+ + ++++ + + ++ TV ++ + IP
Sbjct: 198 PPPRNRCLQDRSNGCVRLA----ILIDSDDHI-ETETKEEKEEEEEETIETVRDNEEEIP 252
Query: 318 EYSAADELRRE 328
EY +E + E
Sbjct: 253 EYKEEEEEKEE 263
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.1 bits (62), Expect = 7.3
Identities = 34/161 (21%), Positives = 59/161 (36%), Gaps = 11/161 (6%)
Query: 176 ERRKIKPKYGDMKETLNDNSAIHFEKFSSQSTPKCNIKAVDVTPKEEYHSGVAEWCESPS 235
E KI+ + +E +N EK S S + K + KEE S E +
Sbjct: 543 ENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEE--SAPQEETKEKE 600
Query: 236 HLRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEP-VELDNARSCPDPRS 294
+ + IE + E + + + S ES+E E + +
Sbjct: 601 NEK--------IEKEESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQVEENEK 652
Query: 295 EDDDDTKRSKSTNTVSESSDLIPEYSAADELRRERGWRSVS 335
+ D+DT S N+VS++ E ++ E + G V+
Sbjct: 653 KTDEDTSESSKENSVSDTEQKQSEETSEKEESNKNGETEVT 693
>At5g66840.1 68418.m08427 SAP domain-containing protein contains
Pfam domain PF02037: SAP domain
Length = 551
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 272 CSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSDLIPEYSA-ADEL 325
CS E EEE V + + + E+D+DT S+ + S D E ADE+
Sbjct: 12 CSSEEEEEDV-FGDENNYDETEEEEDEDTNSSEDDSDWSHDDDDATESDVEADEI 65
>At4g13430.1 68417.m02096 aconitase family protein / aconitate
hydratase family protein contains Pfam profile PF00330:
Aconitase family (aconitate hydratase
Length = 509
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 12 DTPNSALSSDCDEREPDTVLRLQNPQTILRFSDHDKINFNDSLIHKMSNLHLDSP 66
DTP S C DT RL PQ + ++ NF + HK ++L SP
Sbjct: 438 DTPASPSCGACLGGPADTYARLNEPQVCVSTTNR---NFPGRMGHKEGQIYLASP 489
>At3g59150.1 68416.m06594 F-box family protein contains F-box domain
Pfam:PF00646
Length = 509
Score = 28.7 bits (61), Expect = 9.6
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 20 SDCDEREPDTVLRLQNPQTI-LRFSD-----HDKINFNDSLIHKMSNLHLDSPKINTRPH 73
SD D P + P + L +SD ++ + F DSL+ +LHL + +I +P+
Sbjct: 262 SDDDSSAPKPCVSFDTPSLVYLDYSDMVADKYENLKF-DSLVEARLDLHLTAFQIMRKPN 320
Query: 74 SLGI 77
++GI
Sbjct: 321 NIGI 324
>At2g36380.1 68415.m04464 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1453
Score = 28.7 bits (61), Expect = 9.6
Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 9/148 (6%)
Query: 37 QTILRFSDHDKINFNDSLIHKMSNLHLDSPKINTRPHSLGIXXXXXXXXXXX-XXXXXXM 95
+ IL+F + D F L + + ++ PKI R +L + +
Sbjct: 107 EMILKFVEEDNEKFLRRLRERTDRVGIEVPKIEVRYENLSVEGDVRSASRALPTLFNVTL 166
Query: 96 GLSSPDENFPDLIPKKVHKIEDEKDLSLSSIEDERATFFSPQRNTSKNNLYFTENFVTAD 155
L+P K KIE KD+S I+ R T ++ K L + A
Sbjct: 167 NTIESILGLFHLLPSKKRKIEILKDIS-GIIKPSRMTLLLGPPSSGKTTL------LQAL 219
Query: 156 SQILNDTLDLPPDVARIDKHERRKIKPK 183
+ L+DTL + + HE R+ P+
Sbjct: 220 AGKLDDTLQMSGRITYCG-HEFREFVPQ 246
>At2g30280.1 68415.m03686 expressed protein
Length = 346
Score = 28.7 bits (61), Expect = 9.6
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
Query: 188 KETLNDNSAIHFEKFSSQSTPKCNIKAVDVTPKEEYHSGVAE--WCESPSHLRSIPNFEL 245
+E + D A++ E S+ + K V V +EE+ G E + S+ P +
Sbjct: 218 EEYVYDYYAVNEEMDISEDSSKNQFPLVIVEDEEEFCDGSDESDYDSEDSNAEDHPKTDY 277
Query: 246 PIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDD 297
P E + +DD S + S S ES++E + RS DD
Sbjct: 278 PEEEEEEEEEDDDDDDDDESEEEKSEASDESDDEETSKRHVRSVLGDDEFDD 329
>At1g56460.1 68414.m06493 PAPA-1-like family protein / zinc finger
(HIT type) family protein contains Pfam profile PF04795:
PAPA-1-like conserved region
Length = 502
Score = 28.7 bits (61), Expect = 9.6
Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 11/168 (6%)
Query: 148 TENFVTADSQILNDTLDLPPDVARIDKHERRKIKPKYGDMKETLNDNSAIHFEKFSSQST 207
TE F+ + DT+D A D++ +K+K K G +T+N SA +
Sbjct: 86 TEGFLVPSKK--KDTIDTTERRAGFDENIIKKVKLKLGGSSKTINIISA----SDGASDI 139
Query: 208 PKCNIKAVDVTPKEEYHSGVAEWCESPSHLRSIPNFELPIEMSSAVGMRNPPEDDRCSLD 267
C+ K+ + + G+ + + S+ RS P++ +S N D + + +
Sbjct: 140 GLCSTKS---SHASDDALGIGQTYQEISNERSTKLRGTPLDTASKSDSCNDTRDSKANTN 196
Query: 268 SVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSDL 315
+ + S+ LD D E+ +R K V+ D+
Sbjct: 197 PIRKSNRISKRR--VLDEELDSLDDDDEEIQFLRRMKMAKVVAVEEDV 242
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.132 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,906,453
Number of Sequences: 28952
Number of extensions: 584465
Number of successful extensions: 1875
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 1853
Number of HSP's gapped (non-prelim): 53
length of query: 507
length of database: 12,070,560
effective HSP length: 84
effective length of query: 423
effective length of database: 9,638,592
effective search space: 4077124416
effective search space used: 4077124416
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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