Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001350-TA|BGIBMGA001350-PA|IPR001251|Cellular
retinaldehyde-binding/triple function, C-terminal
(507 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0180 + 15502809-15503312,15503399-15503454,15503934-155040... 71 2e-12
03_01_0359 - 2805094-2805175,2805256-2805347,2805443-2805517,280... 54 2e-07
02_05_0251 - 27155905-27156127,27156228-27156697 49 1e-05
01_07_0173 + 41708463-41708709,41709285-41709606,41710389-41710638 36 0.076
09_04_0377 + 17086775-17088310 33 0.41
02_05_0740 - 31404004-31404180,31404365-31405261,31405351-314059... 32 0.94
12_01_0909 - 8828921-8829004,8829204-8829249,8829798-8829919,883... 31 1.6
02_01_0348 - 2506007-2506909,2507003-2508120,2508230-2508883,250... 31 2.2
10_08_0288 + 16527666-16527837,16527915-16528132,16528491-165285... 31 2.9
06_01_0043 - 412675-412798,412891-412997,413104-413197,413733-41... 31 2.9
02_05_0762 + 31562589-31563272 31 2.9
05_04_0331 + 20317482-20318174,20318518-20318685,20318773-203188... 30 3.8
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 30 3.8
03_06_0776 - 36176390-36177589 30 3.8
02_02_0520 + 11152718-11153600,11153736-11153917,11154160-111542... 30 3.8
01_05_0282 - 20347915-20348874,20348968-20349012,20349568-203498... 30 3.8
11_08_0085 + 28264399-28266186 30 5.0
08_02_0747 - 20728073-20728081,20728167-20728353,20728810-207289... 30 5.0
08_01_0972 - 9789453-9790364,9790383-9790861,9791071-9792238 30 5.0
08_01_0329 - 2962018-2962695 30 5.0
07_01_0413 - 3155080-3155274,3155628-3155933,3156062-3156163,315... 30 5.0
05_03_0371 + 13175939-13176688,13177367-13178629 30 5.0
12_02_1236 - 27241842-27242201 29 6.6
12_02_1043 - 25646075-25646437,25646655-25647959,25648394-25648648 29 6.6
12_02_0035 - 12563503-12564405,12564494-12565611,12565709-125662... 29 6.6
07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467 29 6.6
05_05_0029 + 21694448-21694567,21694666-21695117,21695214-216955... 29 6.6
04_03_0340 - 14634664-14634770,14634968-14635076,14635150-146352... 29 6.6
03_05_0223 - 22087076-22087340,22087448-22087726,22087808-220879... 29 6.6
06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-13... 29 8.7
>10_08_0180 +
15502809-15503312,15503399-15503454,15503934-15504053,
15504190-15504260,15504603-15504696,15504772-15504978,
15505406-15505657,15505781-15505889,15506112-15506179,
15506278-15506347,15506429-15506503,15506600-15506691,
15506779-15506860
Length = 599
Score = 70.9 bits (166), Expect = 2e-12
Identities = 37/144 (25%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 356 RVLSHGGYDAHGAALIVFSACHLPDNSRPDYTYVMDNLFLYVIWTLERLVTEEYVLVYLH 415
+++ GG D+ G ++V H ++ L+V+ E L+ + Y +VY H
Sbjct: 433 KIIYRGGVDSEGRPVMVVVGAHFLLRCLD-----LERFVLHVVKEFEPLIQKPYSIVYFH 487
Query: 416 GSAGRRRLPGFHWLHECYKLIDRRLRKSLKHLYLVHPTFWLKSFVILTKPFVSSKFFKKL 475
+A + P ++ +++ R+ +++L +Y++HPT L++ ++ + FV + +KK+
Sbjct: 488 SAASLQPQPDLGFMKRLQQILGRKHQRNLHAIYVLHPTLGLRTAILAMQMFVDGEVWKKV 547
Query: 476 SYVRNLQELMQRVPVEPNAIPETV 499
YV L L + VP E IP+ V
Sbjct: 548 VYVDRLVHLFRYVPREQLTIPDFV 571
>03_01_0359 -
2805094-2805175,2805256-2805347,2805443-2805517,
2805582-2805675,2805769-2805872,2806777-2806885,
2807397-2807609,2808170-2808289,2809060-2809115,
2809210-2809287,2809374-2809733
Length = 460
Score = 54.4 bits (125), Expect = 2e-07
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 389 VMDNLFLYVIWTLERLVTEEYVLVYLHGSAGRRRLPGFHWLHECYKLIDRRLRKSLK--- 445
++ L L + E L+ + Y +VY H +A + P ++ +++ R+ +++L
Sbjct: 314 ILTGLNLPSLQEFEPLIQKPYSIVYFHSAASLQVRPDLGFMKRLQQILGRKHQRNLHVGI 373
Query: 446 ---H--LYLVHPTFWLKSFVILTKPFVSSKFFKKLSYVRNLQELMQRVPVEPNAIPETV 499
H +Y++HPT L++ ++ + FV + +KK+ YV L +L + VP E IP+ V
Sbjct: 374 SYDHTAIYVLHPTLGLRTAILALQLFVDGEVWKKVIYVDRLVQLFRYVPREQLTIPDFV 432
>02_05_0251 - 27155905-27156127,27156228-27156697
Length = 230
Score = 48.8 bits (111), Expect = 1e-05
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 401 LERLVTEEYVLVYLHGSAGRR-RLPGFHWLHECYKLIDRRLRKSLKHLYLVHPTFWLKSF 459
L + E+V+VY+H R PG + Y+ + ++ L+ +Y VHP F + F
Sbjct: 86 LPEIGEREFVVVYVHSLVDRGDNFPGVAAIRAAYEALPAAAKERLRAVYFVHPGFQARLF 145
Query: 460 VILTKPFV-SSKFFKKLSYVRNLQELMQRVPVEPNAIPETVKLYE 503
F+ SS ++KL Y+ L+ L + V +PE + ++
Sbjct: 146 FATLGRFLFSSGLYEKLRYMSRLEYLWEHVSKGEMEVPECARRHD 190
>01_07_0173 + 41708463-41708709,41709285-41709606,41710389-41710638
Length = 272
Score = 35.9 bits (79), Expect = 0.076
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 391 DNLFLYVIWTLERLVTE-EYVLVYLHGSA-GRRRLPGFHWLHECYKLIDRRLRKSLKHLY 448
D L YV+ L + E + L+Y+H + PG L Y+ + ++ L+ LY
Sbjct: 108 DRLKKYVLHKLRTELPEGPFCLLYMHSTVQSDDNNPGMSILRGVYEDLPPEYKERLQILY 167
Query: 449 LVHPTFWLK-SFVILTKPFVSSKFFKKLSYVRNLQELMQRVPVEPNAIPETV 499
+HP + + L + F+S + K+ YV L+ L + IP+ V
Sbjct: 168 FLHPGLRSRLAIATLGRLFLSGGLYWKIKYVSRLEYLWGDIRKGEVEIPDFV 219
>09_04_0377 + 17086775-17088310
Length = 511
Score = 33.5 bits (73), Expect = 0.41
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 238 RSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDD 297
R + +L M + P R D G S E EEE + ++ + ++
Sbjct: 125 RRVKREKLRKSMKRCIWNITPSPPRREGEDEDYGYSDEEEEEEEKKESPKKVASSDKSEE 184
Query: 298 DDTKRSKSTNTVSESSDLIPEYSAADELRRERGWRSVS--SPAASPHR 343
+D+K S ++ S SD + + S +D+ RR++ R S S S HR
Sbjct: 185 EDSKGSSESD--SGESDSLSDSSKSDDTRRKKKGRKGSHRSSKRSRHR 230
>02_05_0740 -
31404004-31404180,31404365-31405261,31405351-31405978,
31405997-31406468,31406575-31407052
Length = 883
Score = 32.3 bits (70), Expect = 0.94
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 7/125 (5%)
Query: 237 LRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSED 296
+R P ++ +V + DD ++ V E E E + + S D
Sbjct: 207 VRVHPEIVPKLKKKKSVKPSSSSSDDDVEVEDVDEEIGEENAEEEEGEEGADEEENDSSD 266
Query: 297 DDDTKRSKSTNTV--SESSD--LIPEYSAADELRRERGWRSVSSPAASPHRALCDMKVIE 352
D D+ S S N++ SES D +P + +L+R+ ++ SSP P D ++ E
Sbjct: 267 DSDSSNSSSDNSIDSSESDDSKTVPPPTVLADLKRK---KTASSPPPEPSSKRVDEELDE 323
Query: 353 PYKRV 357
R+
Sbjct: 324 DDIRI 328
>12_01_0909 -
8828921-8829004,8829204-8829249,8829798-8829919,
8830013-8830078,8830520-8830771,8830859-8830939,
8831193-8831294,8831373-8831410,8831497-8831602,
8831694-8831816,8831918-8831994,8833095-8833240,
8833355-8833533
Length = 473
Score = 31.5 bits (68), Expect = 1.6
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 392 NLFLYVIWTLERLVTEEYVLVYLHGSAGRRRLPGFHWLHECYKLIDRRLRKSLKHLYLVH 451
NLF Y++ + ER ++ ++++L+G G GF + H + KSL L+L +
Sbjct: 71 NLFYYLVES-ERDPAKDPLVLWLNGGPGCSSFDGFVYEHGPFNFESGGSAKSLPKLHL-N 128
Query: 452 PTFWLKSFVILTKPFVSSKFFKKLSYVRNLQE 483
P W K ++ ++ S LSY +N +
Sbjct: 129 PYSWSKVSSVI---YLDSPAGVGLSYSKNTSD 157
>02_01_0348 -
2506007-2506909,2507003-2508120,2508230-2508883,
2508920-2509046
Length = 933
Score = 31.1 bits (67), Expect = 2.2
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 237 LRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSED 296
+R P ++ +V + +DD ++ V E E E + + S D
Sbjct: 308 VRVYPEIVPKLKKKKSVKPSSSDDDDDVEVEDVDEEIGEENAEEEEEEEGADEEENDSSD 367
Query: 297 DDDTKRSKSTNT--VSESSD--LIPEYSAADELRRERGWRSVSSPAASP 341
D D+ S S N+ SES D +P + +L+R+ ++ SSP P
Sbjct: 368 DSDSSNSSSDNSSDSSESDDSKTVPPPTVLADLKRK---KTASSPPPEP 413
>10_08_0288 +
16527666-16527837,16527915-16528132,16528491-16528554,
16528749-16528821,16529294-16529371,16529573-16529730,
16530222-16530390,16530531-16530990,16531098-16531478,
16531834-16532037,16532318-16532451,16532937-16533120
Length = 764
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
Query: 272 CSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSDLIPEYSAADELRRERGW 331
C ++EE +LD+ D +DDDD +T D I E A ++ + G
Sbjct: 499 CEEVNDEEDADLDDDELDDDDDEDDDDD-------DTTKGEEDEIDEEDAVEQTENQAGD 551
Query: 332 RSVSSPAASPHRAL 345
+ P+ P + L
Sbjct: 552 ETKDKPSKGPKQHL 565
>06_01_0043 -
412675-412798,412891-412997,413104-413197,413733-413820,
413902-413943,414117-414223,414812-414942
Length = 230
Score = 30.7 bits (66), Expect = 2.9
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 269 VSGCSMESEEE--PVELDNARSCPDPRSED--DDDTKRSKSTNTVSESSDLIPEYSAADE 324
+ G E+E++ P E+D S +PRS+D D+D T + + I + A +
Sbjct: 92 LEGSRREAEDKIVPREIDADDSDVEPRSDDESDEDDDDDDDTEALMAELERIKKERAEEN 151
Query: 325 LRRER 329
LR+ER
Sbjct: 152 LRKER 156
>02_05_0762 + 31562589-31563272
Length = 227
Score = 30.7 bits (66), Expect = 2.9
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 281 VELDNARSCPDPRSEDDDDTKRSKSTNTVSESSDLIPEYSAADELRRERGWRSVSSPAAS 340
VE + CP P EDDDD T VS++S D ++ + P +
Sbjct: 138 VESKDFYPCPSPVEEDDDDDDIVNVTQAVSDTSTAAATVGECDPGHMQKAPATAPPPPSP 197
Query: 341 P 341
P
Sbjct: 198 P 198
>05_04_0331 +
20317482-20318174,20318518-20318685,20318773-20318895,
20319094-20319165,20321217-20321431,20321521-20321593,
20322092-20322568,20322970-20323077,20323184-20323192,
20323193-20323552
Length = 765
Score = 30.3 bits (65), Expect = 3.8
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 257 NPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDT------KRSKSTNTVS 310
N E+D D S S + EEE E+ + P EDDD+ KR++ T S
Sbjct: 527 NQEEEDASGNDEKSAGSNQ-EEEDAEVKGKDASGKPAGEDDDNALISPQDKRTRRKTTPS 585
Query: 311 ESSDLIPEYSAADEL 325
S P++ A +L
Sbjct: 586 SSFHEPPKFEVATQL 600
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 30.3 bits (65), Expect = 3.8
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 260 EDDRCSLDS---VSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSD 314
EDD LD +S E ++ +ELD+ + SE DDD + S+ + E SD
Sbjct: 541 EDDTEELDEDQDISDNDSEENDDELELDSDMDEENDVSESDDDEELSEKLDDSDEGSD 598
>03_06_0776 - 36176390-36177589
Length = 399
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 284 DNARSCPDPRSEDDDDTKRSKSTNTVSESSD 314
D+A SC S DDDD + + +VSE +D
Sbjct: 71 DHASSCTASGSSDDDDDAQDSDSESVSEPAD 101
>02_02_0520 +
11152718-11153600,11153736-11153917,11154160-11154249,
11154343-11154627,11154776-11154994,11155112-11155339
Length = 628
Score = 30.3 bits (65), Expect = 3.8
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 8/115 (6%)
Query: 112 VHKIEDEKDLSLSSIEDERATFFSPQRNTSKNNLYFTENFVTA----DSQILNDTLDLPP 167
V + +E DL S +E S R S+ T+ ++ I + L
Sbjct: 278 VKRAMEETDLLHKSYNEEMRNMQSAAREHSQKIFEETDQLRKQLDDKENAIERRSKQLSK 337
Query: 168 DVARIDKHERRKIKPKYGDMKETLNDNSAIHFEKFSSQSTPKCNIKAVDVTPKEE 222
VA+ D ERRK++ +MK+ N +IH + Q + K +K V+ KE+
Sbjct: 338 FVAQTDI-ERRKLE---SEMKKNSEQNDSIHMARIEQQKSDKNVLKLVEKHKKEK 388
>01_05_0282 -
20347915-20348874,20348968-20349012,20349568-20349816,
20350393-20350581,20351051-20351155,20351165-20351488,
20351493-20351555
Length = 644
Score = 30.3 bits (65), Expect = 3.8
Identities = 25/129 (19%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 187 MKETLNDNSAIHFEKFSSQSTPKCNIKAVDVTPKEEYHSGVAEWCESPSHLRSIPNFELP 246
+++ ++S IH ++ C+++ + ++H + W P L ++P ++
Sbjct: 30 LRDNAWEHSLIHDKEKGHWKCKWCSLEGYHGITRLKWH--LVGWQNRPQCL-NVPE-DVA 85
Query: 247 IEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDP-RSEDDDDTKRSKS 305
+ + R ++ R +LD + C+M E ++ D SED + +R +
Sbjct: 86 KTIRDKMISREKQKEGRLNLDVIDSCNMPCSSESLQFDQENFAEGKGSSEDFNQAERQSN 145
Query: 306 T-NTVSESS 313
T NTV ++
Sbjct: 146 TLNTVCNTT 154
>11_08_0085 + 28264399-28266186
Length = 595
Score = 29.9 bits (64), Expect = 5.0
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 430 HECYKLIDRRLRKSLKHLYLVHPTFWLKSFVILTKPFVSSKFFKKLSYVRNLQELMQRV 488
H K ++ RL S KHLY H L ++ + K ++++ FKK++ + +MQ V
Sbjct: 257 HYFAKGLEARLAGSGKHLYQNHVRMSLVEYLKVYKLYMAACCFKKVALMFAAMTIMQAV 315
>08_02_0747 -
20728073-20728081,20728167-20728353,20728810-20728913,
20729008-20729139,20729583-20729810,20730263-20730358,
20730440-20730511,20730588-20730760,20730947-20731000,
20731086-20731134,20731228-20731326,20731420-20731511,
20731607-20731832,20731927-20732100,20732186-20732809,
20732890-20733033,20733108-20733218,20733516-20733650,
20733963-20733989
Length = 911
Score = 29.9 bits (64), Expect = 5.0
Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 16/182 (8%)
Query: 175 HERRKIKPKYGDMKETLND-NSAIHFEKFSSQSTPKCNIKAV-D----VTPKEEYH---- 224
HE I+P + ++E +D N A+ + + S+PK N K V D P EE++
Sbjct: 477 HENSGIEPDHEPVEENNDDVNQAVQ-KNNNFTSSPKGNSKTVLDDDKLPIPNEEFNPVNK 535
Query: 225 SGVAEWCESPSHLRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELD 284
S + E H+ +I + + V + P E ++ S + + ++ ++
Sbjct: 536 STILNSSEEIKHI-NIDEIMTKLNKTGHVPINPPDETEKNSALTARNNQVFHDQPSFKIW 594
Query: 285 NARSCPDPRSEDDDDTKRSKSTNTVSESSDLIPE-YSAADELRRERGWRSVSSPAASPHR 343
+ D ++DD K+ +T +++S +IP+ YS LR + R +S A+
Sbjct: 595 GS---DDDLHHENDDFKKEITTAHLADSYQVIPDSYSPNHVLRNKITPRKLSQTFAAAVE 651
Query: 344 AL 345
+L
Sbjct: 652 SL 653
>08_01_0972 - 9789453-9790364,9790383-9790861,9791071-9792238
Length = 852
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 192 NDNSAIHFEKFSSQSTPKCNIKAVDVTPKEEYHSGVAEWCE--SPSHL 237
NDNS+ E+ + C+I D+ ++Y + +W E P+HL
Sbjct: 152 NDNSSYIVERSQHLAATSCSISDEDLVGIDDYRRDLEKWLEDDEPAHL 199
>08_01_0329 - 2962018-2962695
Length = 225
Score = 29.9 bits (64), Expect = 5.0
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Query: 241 PNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDT 300
P E + + G + EDD +D V +M++ V A + +DD++
Sbjct: 120 PEKETRVRLEDLGGESDEDEDDE--VDKVMRWAMDAARLDVATAGAGKAKSTKKDDDEEE 177
Query: 301 KRSKSTNTVSESSDLIPEYSAADELRRERGWRSVSS 336
+ T++ S D E E RER + + S
Sbjct: 178 EEKDQTSSSVSSEDEEEEEEEKLEKERERKRKEMMS 213
>07_01_0413 -
3155080-3155274,3155628-3155933,3156062-3156163,
3156262-3156705
Length = 348
Score = 29.9 bits (64), Expect = 5.0
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 260 EDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSDLIPEY 319
ED + +L+++ G +E E P+ L A P S T +S+ T SESSD E
Sbjct: 272 EDAQAALEALDG--VELEGRPLRLSMAEQNPTAGSPS---TVQSQEEETASESSDAETEQ 326
Query: 320 SAADE 324
S E
Sbjct: 327 SITSE 331
>05_03_0371 + 13175939-13176688,13177367-13178629
Length = 670
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 236 HLRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNAR 287
HL+ + + L E S+ G RN +DD S+DSV S P+ +R
Sbjct: 496 HLKILLRWPLRKEKKSSSGARNELDDDASSVDSVKSWSHGETPTPLRQKYSR 547
>12_02_1236 - 27241842-27242201
Length = 119
Score = 29.5 bits (63), Expect = 6.6
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 SCPD-PRSEDDDDTKRSKSTNTVSESSDLIPEYSAA 322
SC + P +DDD RS+ VSE++ L+P + A
Sbjct: 53 SCVEFPTDDDDDHPPRSRDVVVVSEAAPLLPRATTA 88
>12_02_1043 - 25646075-25646437,25646655-25647959,25648394-25648648
Length = 640
Score = 29.5 bits (63), Expect = 6.6
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
Query: 295 EDDDDTKRSKSTNTVSESSDLIPEYSAADELRRERGWRSVSSPAASPHRALCDMKVIE-P 353
+DDDD S + + +P AA + R WR V PA H A ++ V++ P
Sbjct: 118 DDDDDRLSSLPDDVIGRILSFLPARQAARTTQLSRRWRRV-WPA---HVAALNLSVLDLP 173
Query: 354 YKRVLSHGGYDAHGAALIVFSACHLPDNSRPDYTYVMDN 392
+R G AAL + P P + +D+
Sbjct: 174 RRRRRCPGMIQREFAALAGEALLRFPTTGIPSISVEVDH 212
>12_02_0035 -
12563503-12564405,12564494-12565611,12565709-12566239,
12566337-12567153
Length = 1122
Score = 29.5 bits (63), Expect = 6.6
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Query: 237 LRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSED 296
+R P ++ +V + +DD ++ + E E E + + S D
Sbjct: 320 VRVHPEIVPKLKKKKSVKPSSSDDDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDSGD 379
Query: 297 DDDTKRSKSTNT--VSESSD--LIPEYSAADELRRERGWRSVSSPAAS 340
D D+ S S N+ SES D +P + +L+R+ ++VSSP +S
Sbjct: 380 DSDSSSSSSDNSSDSSESDDSKTVPPPTVLADLKRK---KTVSSPLSS 424
>07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467
Length = 945
Score = 29.5 bits (63), Expect = 6.6
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 237 LRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSED 296
+R P ++ +V + +DD ++ + E E E + + S D
Sbjct: 320 VRVHPEIVPKLKKKKSVKPSSSDDDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDSGD 379
Query: 297 DDDTKRSKSTNT--VSESSD--LIPEYSAADELRRERGWRSVSSPAASP 341
D D+ S S N+ +SES D +P + +L+R+ ++ SSP P
Sbjct: 380 DSDSSSSSSDNSSDLSESGDSKTVPPPTVLADLKRK---KTASSPPPEP 425
>05_05_0029 +
21694448-21694567,21694666-21695117,21695214-21695529,
21695863-21697122
Length = 715
Score = 29.5 bits (63), Expect = 6.6
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 270 SGCSMESEEEP-----VELDNARSCPDPRSEDDDD------TKRSKSTNTVSESSDLIPE 318
S C++ ++E+P V D SC D R D+DD K + + + ++LI +
Sbjct: 214 SDCTVCTDEQPDIDGEVSQDGQGSCGDGRDGDNDDRYSVEYEKDGEMERVLEKQAELIGQ 273
Query: 319 YSAADELRRE 328
Y A + +RE
Sbjct: 274 YEAEEYAQRE 283
>04_03_0340 -
14634664-14634770,14634968-14635076,14635150-14635236,
14635325-14635392,14635929-14636076
Length = 172
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 119 KDLSLSSIEDERATFFSPQRNTSKNNLYFTENFVTADSQILNDTLDL 165
K+L ++ +E +R TFF T K+ Y T+ T + +L DT +L
Sbjct: 99 KELEVNEVEVDRETFFDECHKT-KDGRYVTD--ATQEKMVLTDTCNL 142
>03_05_0223 -
22087076-22087340,22087448-22087726,22087808-22087950,
22088029-22088133,22088272-22088465,22088561-22088753,
22088893-22089202,22089335-22089558,22089862-22089990,
22090019-22090078,22090426-22090617,22091463-22091522,
22091606-22091688,22092473-22092611,22092949-22093083,
22093187-22093462
Length = 928
Score = 29.5 bits (63), Expect = 6.6
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 274 MESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSES----SDLIPEYSAADELRRER 329
+E E + L A S + +DDDD + +ST S DL +S + R+E+
Sbjct: 357 LEKERQKRMLGTAESSDE---DDDDDEEGDRSTKLDSSKPISGDDLGDSFSTDEPARKEK 413
Query: 330 GW 331
GW
Sbjct: 414 GW 415
>06_01_0007 +
130582-131544,132187-132264,132615-132732,133228-133271,
133389-133448,133536-133588,133671-133837,133963-134167,
134989-135046,135225-135281,135363-135608,135938-136002,
136090-136158,136238-136331,136467-136607,137159-137304,
137452-138110,138222-138335,138406-138560
Length = 1163
Score = 29.1 bits (62), Expect = 8.7
Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 245 LPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSK 304
+P E++ + + PP+ ++ + + P+ELD A + P + T+ +
Sbjct: 44 IPTELNVSAAVARPPQPPHAQPTELNAVAAAASALPMELDAAAAAAVPA----ESTELNA 99
Query: 305 STNTVSESSDLIPEYSAADELRRERGWRSVSSPAASPHRAL 345
+ V E +AA E+ + G +V++ A P A+
Sbjct: 100 AATAVPAQP---TEVNAAAEIVKPIGLNAVAAETAKPDMAM 137
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.132 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,575,916
Number of Sequences: 37544
Number of extensions: 688893
Number of successful extensions: 2020
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1995
Number of HSP's gapped (non-prelim): 41
length of query: 507
length of database: 14,793,348
effective HSP length: 85
effective length of query: 422
effective length of database: 11,602,108
effective search space: 4896089576
effective search space used: 4896089576
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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