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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001350-TA|BGIBMGA001350-PA|IPR001251|Cellular
retinaldehyde-binding/triple function, C-terminal
         (507 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_34326| Best HMM Match : CRAL_TRIO (HMM E-Value=0.1)                 69   9e-12
SB_8978| Best HMM Match : No HMM Matches (HMM E-Value=.)               69   9e-12
SB_51170| Best HMM Match : GPP34 (HMM E-Value=1.1)                     53   5e-07
SB_43333| Best HMM Match : No HMM Matches (HMM E-Value=.)              46   5e-05
SB_49107| Best HMM Match : Enterotoxin_HS (HMM E-Value=3.7)            38   0.025
SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59)             35   0.18 
SB_34344| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.23 
SB_41994| Best HMM Match : F-box (HMM E-Value=1.4e-06)                 33   0.54 
SB_1228| Best HMM Match : PKD_channel (HMM E-Value=0)                  33   0.72 
SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0)                      32   0.95 
SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30)                  31   1.7  
SB_55214| Best HMM Match : DUF1665 (HMM E-Value=3)                     31   2.9  
SB_15534| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   2.9  
SB_8607| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   2.9  
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)                30   3.8  
SB_26218| Best HMM Match : Disintegrin (HMM E-Value=0.85)              30   5.1  
SB_43809| Best HMM Match : PSGP (HMM E-Value=0.069)                    30   5.1  
SB_17758| Best HMM Match : Transformer (HMM E-Value=0.35)              29   6.7  
SB_45736| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.7  
SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27)                       29   6.7  
SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12)               29   8.8  
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)              29   8.8  

>SB_34326| Best HMM Match : CRAL_TRIO (HMM E-Value=0.1)
          Length = 429

 Score = 68.9 bits (161), Expect = 9e-12
 Identities = 33/108 (30%), Positives = 55/108 (50%)

Query: 396 YVIWTLERLVTEEYVLVYLHGSAGRRRLPGFHWLHECYKLIDRRLRKSLKHLYLVHPTFW 455
           Y I  L+R+V  +YV+VY H  +     P   +L E Y ++D + R++LK  Y+VHPT W
Sbjct: 294 YFISVLDRIVNRDYVVVYFHTHSTEENQPPMSFLKELYHIVDNKYRRNLKAFYIVHPTVW 353

Query: 456 LKSFVILTKPFVSSKFFKKLSYVRNLQELMQRVPVEPNAIPETVKLYE 503
            +        F +S   +K+ ++  +Q L   +  +   IP  V  Y+
Sbjct: 354 ARIVTWFFTTFTASSVKEKVHFLSGVQYLYDWINPDQLDIPAYVLEYD 401


>SB_8978| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 217

 Score = 68.9 bits (161), Expect = 9e-12
 Identities = 33/108 (30%), Positives = 55/108 (50%)

Query: 396 YVIWTLERLVTEEYVLVYLHGSAGRRRLPGFHWLHECYKLIDRRLRKSLKHLYLVHPTFW 455
           Y I  L+R+V  +YV+VY H  +     P   +L E Y ++D + R++LK  Y+VHPT W
Sbjct: 4   YFISVLDRIVNRDYVVVYFHTHSTEENQPPMSFLKELYHIVDNKYRRNLKAFYIVHPTVW 63

Query: 456 LKSFVILTKPFVSSKFFKKLSYVRNLQELMQRVPVEPNAIPETVKLYE 503
            +        F +S   +K+ ++  +Q L   +  +   IP  V  Y+
Sbjct: 64  ARIVTWFFTTFTASSVKEKVHFLSGVQYLYDWINPDQLDIPAYVLEYD 111


>SB_51170| Best HMM Match : GPP34 (HMM E-Value=1.1)
          Length = 774

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 26/101 (25%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 296 DDDDTKRSKSTNTVSESSDLIPEYSAADELRRERGWRSVSSPAASPHRALCDMKVIEPYK 355
           D  + +   S++   E ++   E++    ++R+  +R  +       + L D+K++EPY 
Sbjct: 581 DYQEAEPGDSSDEHEEYTEDKEEHNPQGLVQRDEHYRWHTVRVNKREKVL-DLKLLEPYM 639

Query: 356 RVLSHGGYDA-HGAALIVFSACHLPDNSRPDYTYVMDNLFL 395
           +V++HGG+     A ++V +AC+LP  +  +Y ++M+ +FL
Sbjct: 640 KVITHGGFHCPERAVIVVIAACYLPSKAEKNYDFLMEQVFL 680



 Score = 33.5 bits (73), Expect = 0.41
 Identities = 12/28 (42%), Positives = 20/28 (71%)

Query: 440 LRKSLKHLYLVHPTFWLKSFVILTKPFV 467
           L+K++ ++++VHP  WLK+ V   K FV
Sbjct: 681 LKKNMINMFIVHPNLWLKTVVRFAKAFV 708


>SB_43333| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 453

 Score = 46.4 bits (105), Expect = 5e-05
 Identities = 19/55 (34%), Positives = 31/55 (56%)

Query: 385 DYTYVMDNLFLYVIWTLERLVTEEYVLVYLHGSAGRRRLPGFHWLHECYKLIDRR 439
           D+  ++    LY+  TL++ V  +Y +VY H     +  P F WLH+ YK +DR+
Sbjct: 170 DHKQLVGASALYMKHTLDQYVESDYTIVYFHYGLTSKNKPNFSWLHQIYKELDRK 224


>SB_49107| Best HMM Match : Enterotoxin_HS (HMM E-Value=3.7)
          Length = 254

 Score = 37.5 bits (83), Expect = 0.025
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 2/104 (1%)

Query: 270 SGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSDLIPEYSAADELRRER 329
           S C    EE   E+    S  +   E +D+    +S     + SD   E       ++ER
Sbjct: 132 SACKATKEESTDEISETNSNHESDFEVEDNDNGDESFGDADDDSDFDAEVERKSRKKKER 191

Query: 330 GWRSVSSPAASP--HRALCDMKVIEPYKRVLSHGGYDAHGAALI 371
             ++V+SPA  P   RA   +  I+  K++    G +  G + +
Sbjct: 192 KTKTVASPAKPPIKPRASVTVTPIKMLKKLQKKSGKNTSGTSSV 235


>SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59)
          Length = 1060

 Score = 34.7 bits (76), Expect = 0.18
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 271 GCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSDLIPEYSAADELRRERG 330
           G +   ++EP E     S   P SE +D+ +R + T  +    D++   ++ DE+++  G
Sbjct: 554 GQNQSQDQEPHENGPIES---PTSEGNDEPRRIQVT--IKPVDDIMSSTASVDEIKKITG 608

Query: 331 WRSVSSPAASPHRAL 345
             S+SSPA+  H +L
Sbjct: 609 SLSLSSPASMVHISL 623


>SB_34344| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 845

 Score = 34.3 bits (75), Expect = 0.23
 Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 4/128 (3%)

Query: 201 KFSSQSTPKCNIKAVDVTPKEEYHSGVAEWCESPSHLRSIPNFELPIEMSSAVGMRNPPE 260
           K S     + N+   ++  K+E  S      ES    R   N +  IE+S  V  R    
Sbjct: 470 KISQMLREQRNVDKPELDAKKEDTSLTENETESKPAFRINDNLQFVIEISENVDNRTVQR 529

Query: 261 DDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSDLIPEYS 320
           +++C LD+    ++ ++ E + LD+ +      ++DDD  +  K T     SS   P  S
Sbjct: 530 EEKCLLDT---GTIRTDPESI-LDHLKETIIDDNDDDDYDEPLKDTEQDIFSSGSSPVKS 585

Query: 321 AADELRRE 328
             +E   E
Sbjct: 586 GLEESDEE 593


>SB_41994| Best HMM Match : F-box (HMM E-Value=1.4e-06)
          Length = 1020

 Score = 33.1 bits (72), Expect = 0.54
 Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 10/145 (6%)

Query: 167 PDVARIDKHERRKIKPKYGDMKETLNDNSAIHFEKFSSQSTPKCNIKAVDVTPKEEYHSG 226
           P + R D+  R K+        ++   N  +  EK      PK N K  ++  KE Y S 
Sbjct: 348 PKLDRQDQLNRLKLLNPARMPHDSEQKNLKLVDEKTHKAGQPKENYKYDNIKLKETYDSK 407

Query: 227 --VAEWCES--PSHLRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSME--SEEEP 280
             V E  E   P   +    +  PI+   AV  R   E+D  +++     S    SEE  
Sbjct: 408 PKVVETLEEAGPKRTKGGEQYRRPIQRPGAVVKRKASEEDNENIEPNESDSQRKTSEEHA 467

Query: 281 VELDNARSCPDPRSEDDDDTKRSKS 305
            E DN     +   E+D D   S++
Sbjct: 468 QEEDN----DNEEGEEDPDENLSQT 488


>SB_1228| Best HMM Match : PKD_channel (HMM E-Value=0)
          Length = 1157

 Score = 32.7 bits (71), Expect = 0.72
 Identities = 23/72 (31%), Positives = 30/72 (41%)

Query: 432 CYKLIDRRLRKSLKHLYLVHPTFWLKSFVILTKPFVSSKFFKKLSYVRNLQELMQRVPVE 491
           CY +I+     SLK  Y V    WL    +LT       FF K  YV    + +QR P E
Sbjct: 750 CYLIIEVGKVLSLKCKYFVSFWNWLNMLQLLTAIATVVLFFFKEDYVSQFVKNVQRNPYE 809

Query: 492 PNAIPETVKLYE 503
             +I   +   E
Sbjct: 810 TTSIDYVILFSE 821


>SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0)
          Length = 768

 Score = 32.3 bits (70), Expect = 0.95
 Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 13/121 (10%)

Query: 200 EKFSSQSTPKCNIKAVD---VTPKEEYHSGVAEWCESPSHLRSIPNFELPIEMSSAVGMR 256
           E  +S+++P+ +  +V+   V+PK E   G      S    +++P  E   +M  A    
Sbjct: 60  EDEASETSPRGSENSVESRSVSPKNEEEDGARAEHRSTGE-KTLPTAENKQDMEDA---- 114

Query: 257 NPPEDDRCSLDSVSGCSMESEEEPVELDNARSCPDPRSED---DDDTKRSKSTNTVSESS 313
              +D++    +   CS E E+EP E+ N     D   ED   D+D      +N   +S 
Sbjct: 115 --SDDNKSENVASPECSNEEEKEPEEIKNKSEMGDSDKEDKKNDEDDVFGDESNEGIKSG 172

Query: 314 D 314
           D
Sbjct: 173 D 173


>SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30)
          Length = 685

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 294 SEDDDDTKRSKSTNTVSESSDLIPEYSAADELRRERGWRSVSSPAASPHRALCDMKVIEP 353
           ++DDDD   S   NT S   +     +A   +R   G    +  +      +C +     
Sbjct: 536 NDDDDDINNSNDNNTSSSGIEATGGGTADRHIRFWNGSTGATLNSVDTKSQVCSILWSNE 595

Query: 354 YKRVLSHGGYDAH 366
           YK ++S  G+  H
Sbjct: 596 YKEIISGHGFSQH 608


>SB_55214| Best HMM Match : DUF1665 (HMM E-Value=3)
          Length = 452

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)

Query: 235 SHLRSIPNF---ELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEE-PVELDNARSCP 290
           SH R++P+    E  ++ SS   +    ED RC LD ++G  +  E +  V++++ RS  
Sbjct: 42  SHYRTLPSESQRERALD-SSESALTAGSEDSRCRLDRLTGMEVNPEVKLLVDMESLRSV- 99

Query: 291 DPRSEDDDDTKRSKSTNTVSESSDLIPEYSAADELRRERGWRSVSSPAASP 341
           D RS+      +S +++T S +S+ +      ++ R E     VS PA  P
Sbjct: 100 DRRSQ---PVLQSNASSTSSINSNALTR--GTEDRRPEEPSGYVSFPAYRP 145


>SB_15534| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1041

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 30/151 (19%), Positives = 60/151 (39%), Gaps = 4/151 (2%)

Query: 161 DTLDLPPDVARIDKHERRKIKPKYGDMKETLNDNSAIHFEKFSSQSTPKCNIKAVDVTPK 220
           + L+L      +DK  + +   ++G+M   L     ++  K   +      ++   +T +
Sbjct: 215 EDLELVKYNLNLDKAPKAQSHSQHGNMHTPLTKGKLVNSYKDRFEGLGAFKMRPYHITLE 274

Query: 221 EEYHSGVAEWCESPSHLRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEP 280
           E     +      P HLR +  ++  I+     G+  P +     ++S+     E+  + 
Sbjct: 275 EGAEPVIHPPRSVPVHLREL--YKQEIDTMLEAGIIEPVDTPTDWVNSI--VLTETTNDK 330

Query: 281 VELDNARSCPDPRSEDDDDTKRSKSTNTVSE 311
            E+ N R C DPR  +    +    T TV E
Sbjct: 331 GEITNIRVCLDPRDLNKWIKREPHYTKTVDE 361


>SB_8607| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 564

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 5/98 (5%)

Query: 254 GMRNPPEDDRCSLDSVSG-CSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSES 312
           G+   P DDR S+D  SG    E+  EP  +    + P     +   T RS S    S  
Sbjct: 264 GIHLAPTDDRASIDQGSGHRKREAWAEPGPIYPRAAIPPYGVSESLPTSRSAS----SIG 319

Query: 313 SDLIPEYSAADELRRERGWRSVSSPAASPHRALCDMKV 350
           SD + + +  D+L  ER   +       P   L D+ +
Sbjct: 320 SDSMSDVTLTDDLMNERPRSTPDDKMRKPTTGLGDVAI 357


>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
          Length = 2293

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 6/129 (4%)

Query: 100 PDENFPDLIPKKVHK---IEDEKDLSLSSIED--ERATFFSPQRNTSKNNLYFTENFVTA 154
           PD N  D +  + +K    +D K+ SL S +D  ER         +S ++     +    
Sbjct: 350 PDANKNDSLKSRDNKKGRTDDSKNDSLRSRDDKKERPVVNRDDSQSSIDDKEKRPDVNKD 409

Query: 155 DSQILNDTLDLPPDVARIDKHERRKIKPKYGDMKETLNDNSAIHFEKFSSQSTPKCNIKA 214
           +SQ   D  +  PD+ + D    R  K K  D+ +  + +S    EK    +  K N K 
Sbjct: 410 ESQRSRDDKEKRPDINKDDSQRSRDDKEKRPDVNKDDSQSSIDDKEKRPDVNKQK-NEKY 468

Query: 215 VDVTPKEEY 223
           ++V  K+ Y
Sbjct: 469 MNVASKDHY 477


>SB_26218| Best HMM Match : Disintegrin (HMM E-Value=0.85)
          Length = 604

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 1/85 (1%)

Query: 264 CSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESSDLIPEYSAAD 323
           C L   S C + +     +L    +C   +S   D TK S    T S + DL   YS  D
Sbjct: 114 CDLTKSSTCDL-TRNSTCDLTKGSTCDLTKSSTCDLTKSSTCDLTKSSTCDLTRNYSTCD 172

Query: 324 ELRRERGWRSVSSPAASPHRALCDM 348
             +      + SS       + CD+
Sbjct: 173 LTKSSTCDLTKSSTCDLTKSSTCDL 197


>SB_43809| Best HMM Match : PSGP (HMM E-Value=0.069)
          Length = 932

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 4/102 (3%)

Query: 242 NFELPIEMSSAVGM-RNPPEDDRCSLDSVSGCSM-ESEEEPVELDNARSCPDPRSEDDDD 299
           N + P   SSA  + RN   D + S  ++S  ++  S + PV    A +   PRS D   
Sbjct: 752 NTQAPKTASSANTIPRNT--DPQASKTAISTATIPRSADAPVSKQVASTATIPRSSDAQV 809

Query: 300 TKRSKSTNTVSESSDLIPEYSAADELRRERGWRSVSSPAASP 341
            K+  ST T+  S+D     +A+     +R     +S   +P
Sbjct: 810 PKQDASTATIPRSTDTQVSTTASSTATIQRDTEIQASKPVTP 851


>SB_17758| Best HMM Match : Transformer (HMM E-Value=0.35)
          Length = 974

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 5/117 (4%)

Query: 167 PDVARIDKHERRKIKPKYGDMKETLNDNSAIHFEKFSSQSTPKCNIKAVDVTPKEEYHSG 226
           P+    +  +++K K K     E+LN+      E   + + P+ N+ + DV+  +E  S 
Sbjct: 67  PEAEAKEVKQKKKKKKKNKKGPESLNECRKEESELLKAVAPPEKNVASTDVSKVQEEESE 126

Query: 227 VAEWCESPSHLRSIPNF-ELPIEMSSAVGMRNPPEDDRCSL-DSVSGCSMESEEEPV 281
           + E     SHL    +  EL +E      +R    D  C +  ++S   ++SE +PV
Sbjct: 127 M-ESTVKDSHLYQRTSIDELFMEYRDPRLLRR--TDKACEIGTAMSSIRVQSERKPV 180


>SB_45736| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 353

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 5/117 (4%)

Query: 167 PDVARIDKHERRKIKPKYGDMKETLNDNSAIHFEKFSSQSTPKCNIKAVDVTPKEEYHSG 226
           P+    +  +++K K K     E+LN+      E   + + P+ N+ + DV+  +E  S 
Sbjct: 212 PEAEAKEVKQKKKKKKKNKKGPESLNECRKEESELLKAVAPPEKNVASTDVSKVQEEESE 271

Query: 227 VAEWCESPSHLRSIPNF-ELPIEMSSAVGMRNPPEDDRCSL-DSVSGCSMESEEEPV 281
           + E     SHL    +  EL +E      +R    D  C +  ++S   ++SE +PV
Sbjct: 272 M-ESTVKDSHLYQRTSIDELFMEYRDPRLLRR--TDKACEIGTAMSSIRVQSERKPV 325


>SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27)
          Length = 1019

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 37/165 (22%), Positives = 62/165 (37%), Gaps = 12/165 (7%)

Query: 177 RRKIKPKYGDMKETLNDNSAIHFEKFSSQSTPKCNIKAVDVTPKEEYHSGVAEWCESPSH 236
           R + +  Y D + T N+    H E  +    P    +     P+  Y     +    P+ 
Sbjct: 750 RSESRIPYADSRITHNETRNAHTESHN----PNIESRLPQNDPRNRYSESRNDSRYIPTE 805

Query: 237 LRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNARSCP-DPRSE 295
            RS PN E    +S +  +++  ++   S    +G S+E  + PV   N ++      S 
Sbjct: 806 SRSHPN-ESRGHLSESGSVQSKDKEKEVS----TGASVEDAKRPVVRTNPKTLERRVESS 860

Query: 296 DDDDTK--RSKSTNTVSESSDLIPEYSAADELRRERGWRSVSSPA 338
           DDD+ K    K+            E   +  L   R  R VS P+
Sbjct: 861 DDDELKVIEEKTDEKSGNRQSRTEENRPSSPLYPNRQQRIVSPPS 905


>SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12)
          Length = 917

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 15/146 (10%)

Query: 173 DKHERRKIKPKYGDMKETLNDNSAIHFEKFSSQSTPKCNIKAVDVTPKEEYHSGVAEWCE 232
           D+ E    + +Y + ++  +D    HF    S+  P    + +D    +EY S  + + +
Sbjct: 465 DRREDEPRRSRYRNFRDDYDDGRPRHF----SRRYPDIREEEMDEQEPQEYRS--SSYVD 518

Query: 233 SPSHLRSIPNFELPIEMSSAVGMRNPPEDDRCSLDSVSGCSMESEEEPVELDNA--RSCP 290
             +  RS P    P+      G     ED+R             E  P   +NA  RS P
Sbjct: 519 ENADTRSNP----PMYRGPPEGPLPYAEDERPRGTPPEYRFPSEEPSPYAEENAISRSNP 574

Query: 291 D---PRSEDDDDTKRSKSTNTVSESS 313
               P+ EDDDD    +S    S+++
Sbjct: 575 PVYTPKEEDDDDDDDEESETEDSQTT 600


>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
          Length = 2735

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 14/51 (27%), Positives = 25/51 (49%)

Query: 263  RCSLDSVSGCSMESEEEPVELDNARSCPDPRSEDDDDTKRSKSTNTVSESS 313
            +  ++  SG  ++ E + +  D+     D   EDDDD KRS      S+++
Sbjct: 990  KSKVEGSSGKVLKKESKKIPEDDDYDNDDDEDEDDDDLKRSDKPEKKSKAA 1040


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.316    0.132    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,190,529
Number of Sequences: 59808
Number of extensions: 816434
Number of successful extensions: 4581
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 4558
Number of HSP's gapped (non-prelim): 34
length of query: 507
length of database: 16,821,457
effective HSP length: 85
effective length of query: 422
effective length of database: 11,737,777
effective search space: 4953341894
effective search space used: 4953341894
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)

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