Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001349-TA|BGIBMGA001349-PA|IPR006553|Leucine-rich
repeat, cysteine-containing subtype, IPR001611|Leucine-rich repeat
(219 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 155 2e-38
L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 155 2e-38
Z29560-10|CAA82663.1| 296|Caenorhabditis elegans Hypothetical p... 39 0.002
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 38 0.004
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 38 0.004
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 38 0.004
Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical p... 36 0.017
Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z48809-8|CAA88748.2| 535|Caenorhabditis elegans Hypothetical pr... 35 0.052
Z48795-8|CAA88732.2| 535|Caenorhabditis elegans Hypothetical pr... 35 0.052
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z73896-7|CAA98061.1| 525|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical p... 31 0.85
Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical p... 31 0.85
Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical p... 31 0.85
AC087081-10|AAK66035.1| 326|Caenorhabditis elegans Hypothetical... 31 0.85
U23514-3|AAC46542.2| 421|Caenorhabditis elegans Hypothetical pr... 30 1.1
U23514-2|AAM48532.1| 418|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF016430-8|AAK95868.2| 200|Caenorhabditis elegans Hypothetical ... 30 1.1
Z81041-11|CAJ90515.1| 713|Caenorhabditis elegans Hypothetical p... 28 6.0
Z81041-10|CAB02785.3| 743|Caenorhabditis elegans Hypothetical p... 28 6.0
>L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical
protein C02F5.7a protein.
Length = 461
Score = 155 bits (376), Expect = 2e-38
Identities = 78/170 (45%), Positives = 99/170 (58%), Gaps = 2/170 (1%)
Query: 31 ALRRLCASGCXXXXXXXXXXXXXXXXXXXXXXXXQCTQLTDAGFQALARNCRMLERMDLE 90
AL LC S C CT L D GF LAR CR LER+D+E
Sbjct: 280 ALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDME 339
Query: 91 ECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQLSLSPCAAEHLTVLGLDNCPLV 150
+C LI+D T+ L+ C L +L+LSHC+LITD I+ L+ E L VL LDNCP +
Sbjct: 340 DCSLISDHTINSLANNCTALRELSLSHCELITDESIQNLASKH--RETLNVLELDNCPQL 397
Query: 151 TDEALEHLTSCHNLQLIELYDCQMVTRNAIRKLRNHLPNIKVHAYFAPVT 200
TD L HL C L+ I+LYDCQ V++ AI + ++H PNI++HAYFAPVT
Sbjct: 398 TDSTLSHLRHCKALKRIDLYDCQNVSKEAIVRFQHHRPNIEIHAYFAPVT 447
Score = 74.9 bits (176), Expect = 4e-14
Identities = 47/167 (28%), Positives = 70/167 (41%), Gaps = 7/167 (4%)
Query: 14 RGCAQTVSDEAVSRLGGALRRLCASGCXXXXXXXXXXXXXXXXXXXXXXXXQCTQLTDAG 73
R V + R GG L+ L GC +C ++TDA
Sbjct: 107 RDVKTAVVENLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDAS 166
Query: 74 FQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQLSLSP 133
+ L R C L ++LE C ITD + ++ GCP L L +S CD I D G+ Q+ LS
Sbjct: 167 CENLGRYCHKLNYLNLENCSSITDRAMKYIGDGCPNLSYLNISWCDAIQDRGV-QIILSN 225
Query: 134 CAAEHLTVLGLDNCPLVTDEAL----EHLTSCHNLQLIELYDCQMVT 176
C + L L L C +T+ H+ + L L++ + +T
Sbjct: 226 C--KSLDTLILRGCEGLTENVFGSVEAHMGAIKKLNLLQCFQLTDIT 270
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 66 CTQLTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNG 125
C + D+ + C LE + L C +TDA+ +L C +L L L +C ITD
Sbjct: 133 CENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLNLENCSSITDRA 192
Query: 126 IKQLSLSPCAAEHLTVLGLDNCPLVTDEALEH-LTSCHNLQLIELYDCQMVTRNAIRKLR 184
+K + C +L+ L + C + D ++ L++C +L + L C+ +T N +
Sbjct: 193 MKYIG-DGCP--NLSYLNISWCDAIQDRGVQIILSNCKSLDTLILRGCEGLTENVFGSVE 249
Query: 185 NHLPNIK 191
H+ IK
Sbjct: 250 AHMGAIK 256
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Query: 66 CTQLTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNG 125
C LT+ F ++ + +++++L +C +TD T+ +++ G LE L +S+C+ I+D
Sbjct: 237 CEGLTENVFGSVEAHMGAIKKLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQISDRS 296
Query: 126 IKQLSLSPCAAEHLTVLGLDNCPLVTDEALEHLT-SCHNLQLIELYDCQMVTRNAIRKLR 184
+ L + +L VL L C L+ D L C L+ +++ DC +++ + I L
Sbjct: 297 LVSLGQH---SHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLA 353
Query: 185 NH 186
N+
Sbjct: 354 NN 355
Score = 54.8 bits (126), Expect = 5e-08
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 66 CTQLTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNG 125
C + D G Q + NC+ L+ + L C +T+ + ++KL L C +TD
Sbjct: 211 CDAIQDRGVQIILSNCKSLDTLILRGCEGLTENVFGSVEAHMGAIKKLNLLQCFQLTDIT 270
Query: 126 IKQLSLSPCAAEHLTVLGLDNCPLVTDEALEHL-TSCHNLQLIELYDCQMVTRN 178
++ ++ A E+L + NC ++D +L L HNL+++EL C ++ N
Sbjct: 271 VQNIANGATALEYLC---MSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDN 321
Score = 44.0 bits (99), Expect = 9e-05
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 95 ITDATLVHLSMGCPR-LEKLTLSHCDLITDNGIKQLSLSPCAAEHLTVLGLDNCPLVTDE 153
+ A + +L+ C L++L+L C+ + D+ ++ + EHL+ L C VTD
Sbjct: 109 VKTAVVENLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLS---LYRCKRVTDA 165
Query: 154 ALEHLTS-CHNLQLIELYDCQMVTRNAIRKLRNHLPNI 190
+ E+L CH L + L +C +T A++ + + PN+
Sbjct: 166 SCENLGRYCHKLNYLNLENCSSITDRAMKYIGDGCPNL 203
>L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical
protein C02F5.7b protein.
Length = 466
Score = 155 bits (376), Expect = 2e-38
Identities = 78/170 (45%), Positives = 99/170 (58%), Gaps = 2/170 (1%)
Query: 31 ALRRLCASGCXXXXXXXXXXXXXXXXXXXXXXXXQCTQLTDAGFQALARNCRMLERMDLE 90
AL LC S C CT L D GF LAR CR LER+D+E
Sbjct: 280 ALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDME 339
Query: 91 ECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQLSLSPCAAEHLTVLGLDNCPLV 150
+C LI+D T+ L+ C L +L+LSHC+LITD I+ L+ E L VL LDNCP +
Sbjct: 340 DCSLISDHTINSLANNCTALRELSLSHCELITDESIQNLASKH--RETLNVLELDNCPQL 397
Query: 151 TDEALEHLTSCHNLQLIELYDCQMVTRNAIRKLRNHLPNIKVHAYFAPVT 200
TD L HL C L+ I+LYDCQ V++ AI + ++H PNI++HAYFAPVT
Sbjct: 398 TDSTLSHLRHCKALKRIDLYDCQNVSKEAIVRFQHHRPNIEIHAYFAPVT 447
Score = 74.9 bits (176), Expect = 4e-14
Identities = 47/167 (28%), Positives = 70/167 (41%), Gaps = 7/167 (4%)
Query: 14 RGCAQTVSDEAVSRLGGALRRLCASGCXXXXXXXXXXXXXXXXXXXXXXXXQCTQLTDAG 73
R V + R GG L+ L GC +C ++TDA
Sbjct: 107 RDVKTAVVENLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDAS 166
Query: 74 FQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQLSLSP 133
+ L R C L ++LE C ITD + ++ GCP L L +S CD I D G+ Q+ LS
Sbjct: 167 CENLGRYCHKLNYLNLENCSSITDRAMKYIGDGCPNLSYLNISWCDAIQDRGV-QIILSN 225
Query: 134 CAAEHLTVLGLDNCPLVTDEAL----EHLTSCHNLQLIELYDCQMVT 176
C + L L L C +T+ H+ + L L++ + +T
Sbjct: 226 C--KSLDTLILRGCEGLTENVFGSVEAHMGAIKKLNLLQCFQLTDIT 270
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 66 CTQLTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNG 125
C + D+ + C LE + L C +TDA+ +L C +L L L +C ITD
Sbjct: 133 CENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLNLENCSSITDRA 192
Query: 126 IKQLSLSPCAAEHLTVLGLDNCPLVTDEALEH-LTSCHNLQLIELYDCQMVTRNAIRKLR 184
+K + C +L+ L + C + D ++ L++C +L + L C+ +T N +
Sbjct: 193 MKYIG-DGCP--NLSYLNISWCDAIQDRGVQIILSNCKSLDTLILRGCEGLTENVFGSVE 249
Query: 185 NHLPNIK 191
H+ IK
Sbjct: 250 AHMGAIK 256
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Query: 66 CTQLTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNG 125
C LT+ F ++ + +++++L +C +TD T+ +++ G LE L +S+C+ I+D
Sbjct: 237 CEGLTENVFGSVEAHMGAIKKLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQISDRS 296
Query: 126 IKQLSLSPCAAEHLTVLGLDNCPLVTDEALEHLT-SCHNLQLIELYDCQMVTRNAIRKLR 184
+ L + +L VL L C L+ D L C L+ +++ DC +++ + I L
Sbjct: 297 LVSLGQH---SHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLA 353
Query: 185 NH 186
N+
Sbjct: 354 NN 355
Score = 54.8 bits (126), Expect = 5e-08
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 66 CTQLTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNG 125
C + D G Q + NC+ L+ + L C +T+ + ++KL L C +TD
Sbjct: 211 CDAIQDRGVQIILSNCKSLDTLILRGCEGLTENVFGSVEAHMGAIKKLNLLQCFQLTDIT 270
Query: 126 IKQLSLSPCAAEHLTVLGLDNCPLVTDEALEHL-TSCHNLQLIELYDCQMVTRN 178
++ ++ A E+L + NC ++D +L L HNL+++EL C ++ N
Sbjct: 271 VQNIANGATALEYLC---MSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDN 321
Score = 44.0 bits (99), Expect = 9e-05
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 95 ITDATLVHLSMGCPR-LEKLTLSHCDLITDNGIKQLSLSPCAAEHLTVLGLDNCPLVTDE 153
+ A + +L+ C L++L+L C+ + D+ ++ + EHL+ L C VTD
Sbjct: 109 VKTAVVENLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLS---LYRCKRVTDA 165
Query: 154 ALEHLTS-CHNLQLIELYDCQMVTRNAIRKLRNHLPNI 190
+ E+L CH L + L +C +T A++ + + PN+
Sbjct: 166 SCENLGRYCHKLNYLNLENCSSITDRAMKYIGDGCPNL 203
>Z29560-10|CAA82663.1| 296|Caenorhabditis elegans Hypothetical
protein K03H1.11 protein.
Length = 296
Score = 39.1 bits (87), Expect = 0.002
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 84 LERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQLSLSPCAAEHLTVLG 143
L +DLE I TL L+ G +LEK+ + C+L D K L + + LT +
Sbjct: 128 LSEIDLER---INTWTLALLA-GYDKLEKVEIEGCNLGGDTEAKLLRCFQASFQTLTQID 183
Query: 144 LDNCPLVTDEALEHLT-SCHNLQLIELYDCQMVT 176
L +TD + ++ SC NL + DC VT
Sbjct: 184 LKGTSQITDHFSQRVSRSCPNLAYFRISDCPRVT 217
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Query: 69 LTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQ 128
+TD A++ NC LE + + C +T + L + C +L+ L L+H L +N +K
Sbjct: 246 ITDEHVDAISSNCAHLECLCVNYCPKVTGSCLKLVLQRCRKLKTLFLAHTKL-DNNIVKM 304
Query: 129 LSLSPCAAEHLTVLGLDNCPLVTDEALEHLTSCHNLQLIELYDCQMVTRNAIRKLRN 185
+ E L + G + L +D + LT +L+ ++ + +T + +N
Sbjct: 305 VDWEKTRIEELDIKGTE---LNSDALISILTRLPHLRWLDASWLECMTDQVLEAWQN 358
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Query: 69 LTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQ 128
+TD A++ NC LE + + C +T + L + C +L+ L L+H L +N +K
Sbjct: 229 ITDEHVDAISSNCAHLECLCVNYCPKVTGSCLKLVLQRCRKLKTLFLAHTKL-DNNIVKM 287
Query: 129 LSLSPCAAEHLTVLGLDNCPLVTDEALEHLTSCHNLQLIELYDCQMVTRNAIRKLRN 185
+ E L + G + L +D + LT +L+ ++ + +T + +N
Sbjct: 288 VDWEKTRIEELDIKGTE---LNSDALISILTRLPHLRWLDASWLECMTDQVLEAWQN 341
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Query: 69 LTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQ 128
+TD A++ NC LE + + C +T + L + C +L+ L L+H L +N +K
Sbjct: 263 ITDEHVDAISSNCAHLECLCVNYCPKVTGSCLKLVLQRCRKLKTLFLAHTKL-DNNIVKM 321
Query: 129 LSLSPCAAEHLTVLGLDNCPLVTDEALEHLTSCHNLQLIELYDCQMVTRNAIRKLRN 185
+ E L + G + L +D + LT +L+ ++ + +T + +N
Sbjct: 322 VDWEKTRIEELDIKGTE---LNSDALISILTRLPHLRWLDASWLECMTDQVLEAWQN 375
>Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical
protein C53A5.2 protein.
Length = 1150
Score = 36.3 bits (80), Expect = 0.017
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 109 RLEKLTLSHCDLITDNGIKQLSLSPCAAEHLTVLGLDNCPLVTDEALEHLTSCHNLQLIE 168
R+EKL L+ CD D +K L+ A+ LT L + P +TD A+ L +L+
Sbjct: 1045 RIEKLKLNFCDYFGDEALKFLAQGR-PAQTLTDLEIVLNPCITDGAVYWLLKLKSLRRAH 1103
Query: 169 LYDCQMVT--RNAIRKLRNHLPNIKV 192
Y V + IR+L+ LP V
Sbjct: 1104 FYFLPYVAHRQGFIRQLKMALPRCNV 1129
>Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical protein
C53A5.2 protein.
Length = 1150
Score = 36.3 bits (80), Expect = 0.017
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 109 RLEKLTLSHCDLITDNGIKQLSLSPCAAEHLTVLGLDNCPLVTDEALEHLTSCHNLQLIE 168
R+EKL L+ CD D +K L+ A+ LT L + P +TD A+ L +L+
Sbjct: 1045 RIEKLKLNFCDYFGDEALKFLAQGR-PAQTLTDLEIVLNPCITDGAVYWLLKLKSLRRAH 1103
Query: 169 LYDCQMVT--RNAIRKLRNHLPNIKV 192
Y V + IR+L+ LP V
Sbjct: 1104 FYFLPYVAHRQGFIRQLKMALPRCNV 1129
>Z48809-8|CAA88748.2| 535|Caenorhabditis elegans Hypothetical
protein T01E8.1 protein.
Length = 535
Score = 34.7 bits (76), Expect = 0.052
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 95 ITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQLSLSPCAAEHLTVLGLDNCPLVTDEA 154
+TD L L+ +EK+TL C +T+ G + ++ L + + +TD+
Sbjct: 72 LTDEMLNQLTTNNKYVEKITLVDCPNVTNLGAQAVTTGQILLRQLELRAMHQ---LTDQC 128
Query: 155 LEHLTSCHNLQLIELYDCQMVTRNAIRKLRNHLPNI 190
LE++ S L ++L C +T IR L P I
Sbjct: 129 LENVYSPF-LYSVDLSGCGKITSQGIRTLLIKNPTI 163
Score = 31.5 bits (68), Expect = 0.49
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 77 LARNCRMLERMDLEECVLITDATLVHLSMGCPRLE-KLTLSHCDLITDNGIKQLSLSPCA 135
L NCR L +++ C +++D L L+ CP E ++ + C TD I L+
Sbjct: 427 LGGNCRQLRCLNINGCRMVSDKGLAVLAKRCPLREVRIRGTAC---TDKSIYTLAQFCPE 483
Query: 136 AEHLTVLGLDNCPLVTDEALEHL-TSC 161
E ++ P +D AL+ L SC
Sbjct: 484 LEWISYADYSGRPKFSDAALQCLRDSC 510
Score = 29.1 bits (62), Expect = 2.6
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 84 LERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQLSLSPCAAEHLTVLG 143
L +DL C IT + L + P + L L+HC + D + ++ + L VL
Sbjct: 137 LYSVDLSGCGKITSQGIRTLLIKNPTIGCLYLNHCRSLDDQVL--YDIAHYVGDRLHVLE 194
Query: 144 LDNCPLVTD--EALEHLTS-CHNLQLIEL 169
LD + D AL +L+S C NL + L
Sbjct: 195 LDFPTSLADPAAALHYLSSQCPNLSQLSL 223
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 66 CTQLTDAGFQALARNCRMLE-RMDLEECVLITDATLVHLSMGCPRLE 111
C ++D G LA+ C + E R+ C TD ++ L+ CP LE
Sbjct: 442 CRMVSDKGLAVLAKRCPLREVRIRGTAC---TDKSIYTLAQFCPELE 485
>Z48795-8|CAA88732.2| 535|Caenorhabditis elegans Hypothetical
protein T01E8.1 protein.
Length = 535
Score = 34.7 bits (76), Expect = 0.052
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 95 ITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQLSLSPCAAEHLTVLGLDNCPLVTDEA 154
+TD L L+ +EK+TL C +T+ G + ++ L + + +TD+
Sbjct: 72 LTDEMLNQLTTNNKYVEKITLVDCPNVTNLGAQAVTTGQILLRQLELRAMHQ---LTDQC 128
Query: 155 LEHLTSCHNLQLIELYDCQMVTRNAIRKLRNHLPNI 190
LE++ S L ++L C +T IR L P I
Sbjct: 129 LENVYSPF-LYSVDLSGCGKITSQGIRTLLIKNPTI 163
Score = 31.5 bits (68), Expect = 0.49
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 77 LARNCRMLERMDLEECVLITDATLVHLSMGCPRLE-KLTLSHCDLITDNGIKQLSLSPCA 135
L NCR L +++ C +++D L L+ CP E ++ + C TD I L+
Sbjct: 427 LGGNCRQLRCLNINGCRMVSDKGLAVLAKRCPLREVRIRGTAC---TDKSIYTLAQFCPE 483
Query: 136 AEHLTVLGLDNCPLVTDEALEHL-TSC 161
E ++ P +D AL+ L SC
Sbjct: 484 LEWISYADYSGRPKFSDAALQCLRDSC 510
Score = 29.1 bits (62), Expect = 2.6
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 84 LERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQLSLSPCAAEHLTVLG 143
L +DL C IT + L + P + L L+HC + D + ++ + L VL
Sbjct: 137 LYSVDLSGCGKITSQGIRTLLIKNPTIGCLYLNHCRSLDDQVL--YDIAHYVGDRLHVLE 194
Query: 144 LDNCPLVTD--EALEHLTS-CHNLQLIEL 169
LD + D AL +L+S C NL + L
Sbjct: 195 LDFPTSLADPAAALHYLSSQCPNLSQLSL 223
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 66 CTQLTDAGFQALARNCRMLE-RMDLEECVLITDATLVHLSMGCPRLE 111
C ++D G LA+ C + E R+ C TD ++ L+ CP LE
Sbjct: 442 CRMVSDKGLAVLAKRCPLREVRIRGTAC---TDKSIYTLAQFCPELE 485
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 33.1 bits (72), Expect = 0.16
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 67 TQLTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNGI 126
+++ + F+ L +C L+ + + EC ITD +LSM R+E L++ + +G
Sbjct: 428 SKVDEMAFEDLCTSCGGLKELRINECYKITDE---NLSMIARRMEDLSIL---TLCGDGF 481
Query: 127 KQLS----LSPCAAEHLTVLGLDNCPLVTDEAL 155
K L+ + ++T L LD LV DE L
Sbjct: 482 KSLTSAGLIHISHMRNITELALDYNALVNDELL 514
>Z73896-7|CAA98061.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 30.7 bits (66), Expect = 0.85
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 66 CTQLTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNG 125
C LT L N L+++ L V + D+ + +S C +L L ++ C + G
Sbjct: 404 CEYLTVNSLITLG-NLNNLKQLSLPGIVNVDDSVCLQISR-CSKLTYLNINFCRRVQKRG 461
Query: 126 IKQLSLSPCAAEHLTVLGL 144
+ L + +HL VLG+
Sbjct: 462 LLCLLSCLTSLDHLEVLGI 480
>Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 30.7 bits (66), Expect = 0.85
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 66 CTQLTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNG 125
C LT L N L+++ L V + D+ + +S C +L L ++ C + G
Sbjct: 404 CEYLTVNSLITLG-NLNNLKQLSLPGIVNVDDSVCLQISR-CSKLTYLNINFCRRVQKRG 461
Query: 126 IKQLSLSPCAAEHLTVLGL 144
+ L + +HL VLG+
Sbjct: 462 LLCLLSCLTSLDHLEVLGI 480
>Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical
protein B0564.6b protein.
Length = 423
Score = 30.7 bits (66), Expect = 0.85
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 66 CTQLTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNG 125
C LT L N L+++ L V + D+ + +S C +L L ++ C + G
Sbjct: 302 CEYLTVNSLITLG-NLNNLKQLSLPGIVNVDDSVCLQISR-CSKLTYLNINFCRRVQKRG 359
Query: 126 IKQLSLSPCAAEHLTVLGL 144
+ L + +HL VLG+
Sbjct: 360 LLCLLSCLTSLDHLEVLGI 378
>Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.6a protein.
Length = 525
Score = 30.7 bits (66), Expect = 0.85
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 66 CTQLTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNG 125
C LT L N L+++ L V + D+ + +S C +L L ++ C + G
Sbjct: 404 CEYLTVNSLITLG-NLNNLKQLSLPGIVNVDDSVCLQISR-CSKLTYLNINFCRRVQKRG 461
Query: 126 IKQLSLSPCAAEHLTVLGL 144
+ L + +HL VLG+
Sbjct: 462 LLCLLSCLTSLDHLEVLGI 480
>AC087081-10|AAK66035.1| 326|Caenorhabditis elegans Hypothetical
protein Y82E9BL.8 protein.
Length = 326
Score = 30.7 bits (66), Expect = 0.85
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 144 LDNCPLVTDEALEHLTSCHNLQLIELYDCQMVTRNAIRK-LRN 185
LD C +VT LE SC N + + D ++++++ R LRN
Sbjct: 105 LDGCSIVTLNKLEPTISCENFMKLAIKDLELLSKHTSRLCLRN 147
>U23514-3|AAC46542.2| 421|Caenorhabditis elegans Hypothetical
protein F48E8.7a protein.
Length = 421
Score = 30.3 bits (65), Expect = 1.1
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 75 QALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQLSLSPC 134
+ LA + +DL + V I+D L + PRL ++L+ C + N + + P
Sbjct: 305 EILAAKSNYVTDLDLSDNVEISDPGLAVILNKFPRLTTISLNRCYGLDPNMVVHFNSKP- 363
Query: 135 AAEHLTVLGLDNCPLVTDEALE-HLTSCHNLQLIELY 170
L L + C V+D +E L C NL++ Y
Sbjct: 364 ---SLVYLNVHGC--VSDTNMELFLEMCSNLKVNRQY 395
>U23514-2|AAM48532.1| 418|Caenorhabditis elegans Hypothetical
protein F48E8.7b protein.
Length = 418
Score = 30.3 bits (65), Expect = 1.1
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 75 QALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQLSLSPC 134
+ LA + +DL + V I+D L + PRL ++L+ C + N + + P
Sbjct: 302 EILAAKSNYVTDLDLSDNVEISDPGLAVILNKFPRLTTISLNRCYGLDPNMVVHFNSKP- 360
Query: 135 AAEHLTVLGLDNCPLVTDEALE-HLTSCHNLQLIELY 170
L L + C V+D +E L C NL++ Y
Sbjct: 361 ---SLVYLNVHGC--VSDTNMELFLEMCSNLKVNRQY 392
>AF016430-8|AAK95868.2| 200|Caenorhabditis elegans Hypothetical
protein C05C8.1 protein.
Length = 200
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 138 HLTVLGLDNCPLVTDEALEHLTSCHNLQLIELYDCQMV--TRNAIRKLRNHLPNIKV 192
HL L ++ C +T+ LEHLT L + L + + V KLR LP +
Sbjct: 140 HLKTLHIEECRRITEFGLEHLTKFSALDKLVLRNLKSVHGKEKVQEKLRGALPKTDI 196
>Z81041-11|CAJ90515.1| 713|Caenorhabditis elegans Hypothetical
protein C27A7.3b protein.
Length = 713
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 148 PLVTDEALEHLTSCHNLQLIELYDCQMVTRNAIRKLRNHLPNIKVH 193
P + + + + C N E+ C + ++KL HL N K H
Sbjct: 417 PPIRENKWDSMEECLNFGSAEVLQCDKAEGHDLKKLSLHLENCKEH 462
>Z81041-10|CAB02785.3| 743|Caenorhabditis elegans Hypothetical
protein C27A7.3a protein.
Length = 743
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 148 PLVTDEALEHLTSCHNLQLIELYDCQMVTRNAIRKLRNHLPNIKVH 193
P + + + + C N E+ C + ++KL HL N K H
Sbjct: 447 PPIRENKWDSMEECLNFGSAEVLQCDKAEGHDLKKLSLHLENCKEH 492
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.325 0.136 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,089,782
Number of Sequences: 27539
Number of extensions: 138698
Number of successful extensions: 441
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 370
Number of HSP's gapped (non-prelim): 51
length of query: 219
length of database: 12,573,161
effective HSP length: 79
effective length of query: 140
effective length of database: 10,397,580
effective search space: 1455661200
effective search space used: 1455661200
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 58 (27.5 bits)
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