Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001348-TA|BGIBMGA001348-PA|IPR001810|Cyclin-like F-box,
IPR006553|Leucine-rich repeat, cysteine-containing subtype,
IPR001395|Aldo/keto reductase
         (595 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   7.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   7.9  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 7/22 (31%), Positives = 11/22 (50%)

Query: 517 DGCPLLTHVNVSWCQSITESGV 538
           D C + +   +SWC  + E  V
Sbjct: 299 DACTIASKQTISWCYKLQEQFV 320


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 7/22 (31%), Positives = 11/22 (50%)

Query: 517 DGCPLLTHVNVSWCQSITESGV 538
           D C + +   +SWC  + E  V
Sbjct: 299 DACTIASKQTISWCYKLQEQFV 320


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.136    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,609
Number of Sequences: 317
Number of extensions: 5769
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 2
length of query: 595
length of database: 114,650
effective HSP length: 61
effective length of query: 534
effective length of database: 95,313
effective search space: 50897142
effective search space used: 50897142
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)