Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001347-TA|BGIBMGA001347-PA|IPR009911|Fibroin P25
         (220 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.6  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 183 SKDLTLLHIYEREHIFGKRNWLARSFIS 210
           SK   ++ + + +H FGK N   RSF S
Sbjct: 188 SKYQFVVLVLQLQHRFGKINRTMRSFFS 215


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 183 SKDLTLLHIYEREHIFGKRNWLARSFIS 210
           SK   ++ + + +H FGK N   RSF S
Sbjct: 188 SKYQFVVLVLQLQHRFGKINRTMRSFFS 215


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/26 (30%), Positives = 16/26 (61%)

Query: 192 YEREHIFGKRNWLARSFISRTLCDFG 217
           Y+++H++  +  L+    S +LCD G
Sbjct: 112 YDQQHLYHPQVLLSPGGYSGSLCDQG 137


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.327    0.141    0.464 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,269
Number of Sequences: 317
Number of extensions: 2525
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 3
length of query: 220
length of database: 114,650
effective HSP length: 54
effective length of query: 166
effective length of database: 97,532
effective search space: 16190312
effective search space used: 16190312
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 42 (21.0 bits)