GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001347-TA|BGIBMGA001347-PA|IPR009911|Fibroin P25
         (220 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P04148 Cluster: Fibrohexamerin precursor; n=2; Bombyx|R...   439   e-122
UniRef50_O62605 Cluster: Fibrohexamerin precursor; n=2; Obtectom...   222   5e-57
UniRef50_Q9BLL4 Cluster: Fibroin P25; n=1; Papilio xuthus|Rep: F...   217   2e-55
UniRef50_Q14UU6 Cluster: Low molecular weight silk protein; n=1;...   174   2e-42
UniRef50_A5E451 Cluster: Putative uncharacterized protein; n=1; ...    35   1.4  
UniRef50_Q8JKF9 Cluster: Orf154; n=1; Heliothis zea virus 1|Rep:...    33   4.2  
UniRef50_Q1ATV3 Cluster: Fumarylacetoacetate (FAA) hydrolase; n=...    33   5.5  
UniRef50_A0LYQ0 Cluster: Protein containing DUF344; n=15; cellul...    32   9.6  

>UniRef50_P04148 Cluster: Fibrohexamerin precursor; n=2; Bombyx|Rep:
           Fibrohexamerin precursor - Bombyx mori (Silk moth)
          Length = 220

 Score =  439 bits (1082), Expect = e-122
 Identities = 197/200 (98%), Positives = 198/200 (99%)

Query: 21  SPIYRPCYLDDYKCISDHLAAISKCIPGRGQIPSQYEIPVFQFEIPYFNATYVDHNLITR 80
           SPIYRPCYLDDYKCISDHLAA SKCIPGRGQIPSQYEIPVFQFEIPYFNATYVDHNLITR
Sbjct: 21  SPIYRPCYLDDYKCISDHLAANSKCIPGRGQIPSQYEIPVFQFEIPYFNATYVDHNLITR 80

Query: 81  NHDKCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKEDVVLSFYINGSYPLIR 140
           NHD+CRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKEDVVLSFYINGSYPLIR
Sbjct: 81  NHDQCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKEDVVLSFYINGSYPLIR 140

Query: 141 LTTVFDKGNNFDLCSAFTFADLAGGLPIFHINPNDQRTAQWLSKDLTLLHIYEREHIFGK 200
           LTTVFDKGNNFDLCSAFTFADLAGGLPIFHINPNDQRTAQWLSKDLTLLHIYEREHIFGK
Sbjct: 141 LTTVFDKGNNFDLCSAFTFADLAGGLPIFHINPNDQRTAQWLSKDLTLLHIYEREHIFGK 200

Query: 201 RNWLARSFISRTLCDFGCHH 220
           RNWLARSFISRTLCDFGC H
Sbjct: 201 RNWLARSFISRTLCDFGCQH 220


>UniRef50_O62605 Cluster: Fibrohexamerin precursor; n=2;
           Obtectomera|Rep: Fibrohexamerin precursor - Galleria
           mellonella (Wax moth)
          Length = 218

 Score =  222 bits (543), Expect = 5e-57
 Identities = 105/197 (53%), Positives = 140/197 (71%), Gaps = 2/197 (1%)

Query: 23  IYRPCYLDDYKCISDHLAAISKCIPG-RGQIPSQYEIPVFQFEIPYFNATYVDHNLITRN 81
           + RPC LDD KCI D+++A S C    RG IPS+Y IP F FE P+FNA+Y+D+NLI RN
Sbjct: 22  VVRPCRLDDLKCIRDNISANSNCNANVRGSIPSEYVIPRFNFETPFFNASYIDNNLIIRN 81

Query: 82  HDKCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKEDVVLSFYINGSYPLIRL 141
           +D CRVSEF+ NV+   +VL VDCP L+ ES+RTL QH S +E+   +++I G YPLIRL
Sbjct: 82  NDACRVSEFFFNVKADTSVLAVDCPNLDLESDRTLIQHASLQEETTYNYHIRGIYPLIRL 141

Query: 142 TTVFDKGNNFDLCSAFTFADLAGGLPIFHINPNDQRTAQWLSKDLTLLHIYEREHIFGKR 201
           TT     +  +LC+AFT+AD+   LPIF I+P D+ TA +LS+DL+LL+IYERE    + 
Sbjct: 142 TTNLLNADRLNLCNAFTYADVT-ALPIFKIDPKDRPTANFLSRDLSLLNIYERETFAYRP 200

Query: 202 NWLARSFISRTLCDFGC 218
             L R F++  +CDFGC
Sbjct: 201 PQLIRQFVNSLICDFGC 217


>UniRef50_Q9BLL4 Cluster: Fibroin P25; n=1; Papilio xuthus|Rep:
           Fibroin P25 - Papilio xuthus
          Length = 215

 Score =  217 bits (529), Expect = 2e-55
 Identities = 100/198 (50%), Positives = 139/198 (70%), Gaps = 2/198 (1%)

Query: 23  IYRPCYLDDYKCISDHLAAISKCIPG-RGQIPSQYEIPVFQFEIPYFNATYVDHNLITRN 81
           + RPC L D  CI  +LAA S+C P   G+IP++Y +    F  PYFNATY+D+NL+  N
Sbjct: 18  VVRPCALSDLACIGRNLAANSRCNPNVPGRIPARYTVQSLPFHAPYFNATYIDYNLVVSN 77

Query: 82  HDKCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKEDVVLSFYINGSYPLIRL 141
           H++CRVSEF+ N+ +   VL++DCP L+FESNR   QH S +ED   S+ I G+YPLIRL
Sbjct: 78  HNRCRVSEFFINLSSKTAVLSLDCPNLDFESNRLTIQHASLQEDRQFSYTIQGTYPLIRL 137

Query: 142 TTVFDKGNNFDLCSAFTFADLAGGLPIFHINPNDQRTAQWLSKDLTLLHIYEREHIFGKR 201
           TT     N  +LCS+ TFAD+   LP F +NPN+++TA +LS+DLTLL+I+ERE  F + 
Sbjct: 138 TTNLHASNGLNLCSSLTFADVV-ALPKFRLNPNNKQTANYLSRDLTLLNIFERECFFWRA 196

Query: 202 NWLARSFISRTLCDFGCH 219
           + LAR FI+  +C++GC+
Sbjct: 197 SLLARYFINSLICNYGCN 214


>UniRef50_Q14UU6 Cluster: Low molecular weight silk protein; n=1;
           Yponomeuta evonymellus|Rep: Low molecular weight silk
           protein - Yponomeuta evonymella (Bird-cherry ermine
           moth)
          Length = 217

 Score =  174 bits (423), Expect = 2e-42
 Identities = 79/197 (40%), Positives = 126/197 (63%), Gaps = 1/197 (0%)

Query: 23  IYRPCYLDDYKCISDHLAAISKCIPGRGQIPSQYEIPVFQFEIPYFNATYVDHNLITRNH 82
           I RPC+L D +CI D+LAA S C            +  F+FE P+F+++Y+++NLI RN 
Sbjct: 20  IVRPCHLQDLECIQDNLAANSHCKTNIAGTAPTATVSNFRFECPFFHSSYIENNLIMRNV 79

Query: 83  DKCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKEDVVLSFYINGSYPLIRLT 142
           D C VSEF+ N+ T K +L++DC     E++RT+ QH S  ED V  ++IN +YP++RLT
Sbjct: 80  DSCVVSEFFFNMDTDKALLSIDCLDFGLEADRTVLQHRSLHEDSVYQYHINSTYPILRLT 139

Query: 143 TVFDKGNNFDLCSAFTFADLAGGLPIFHINPNDQRTAQWLSKDLTLLHIYEREHIFGKRN 202
           T  +  +  + CS +TF ++   LPIFHI+P D+ T+++L++D++ L  +ERE    + +
Sbjct: 140 TNMNNADRINFCSEYTFVEIP-VLPIFHIDPKDKLTSKFLTRDMSELFAFERETFNYRGS 198

Query: 203 WLARSFISRTLCDFGCH 219
            +   F+   +CDFGC+
Sbjct: 199 GIMNWFLQHKICDFGCN 215


>UniRef50_A5E451 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 793

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 158 TFADLAGGLPIFHINPNDQRTAQWLSKDLTLLHIYEREHIFGKRNWLARSFIS 210
           TF+D     P  HIN    R +    K L +L  Y  EH FG R W+ ++++S
Sbjct: 138 TFSDFIASNP--HINTESPRFSLESEKTLIILSPYSPEHAFG-RKWVTKTYLS 187


>UniRef50_Q8JKF9 Cluster: Orf154; n=1; Heliothis zea virus 1|Rep:
           Orf154 - Heliothis zea virus 1
          Length = 1505

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 65  IPYFNATYVDHNLITRNHDKCRVSEFYDNVRTLKTVLTVDCPWLNF 110
           I  FN T+ D N+   +H+  R+S  Y   R L+  ++ D  +LNF
Sbjct: 159 IQSFNETFFDMNINDDDHNNWRLSREYVCARNLREKISTDSTFLNF 204


>UniRef50_Q1ATV3 Cluster: Fumarylacetoacetate (FAA) hydrolase; n=3;
           Actinobacteria (class)|Rep: Fumarylacetoacetate (FAA)
           hydrolase - Rubrobacter xylanophilus (strain DSM 9941 /
           NBRC 16129)
          Length = 320

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 25  RPCYLDDYKCISDHLAAISKCIPGRGQIPSQ-YEIPVFQFEIPY 67
           +P  L D+    +H+  I++ +   G +P   YEIP F F  PY
Sbjct: 65  QPPTLRDFVVFEEHVEGITRSVSEEGGVPEAWYEIPTFYFGNPY 108


>UniRef50_A0LYQ0 Cluster: Protein containing DUF344; n=15; cellular
           organisms|Rep: Protein containing DUF344 - Gramella
           forsetii (strain KT0803)
          Length = 294

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 68  FNATYVDHNLITRNHDKCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKEDVV 127
           FN T+ ++ L+TR H +  ++E    + T   + T D     FE  R   QH++    ++
Sbjct: 121 FNRTHYENVLVTRVHPEYILNENIPGINTTSDI-TEDFWEKRFEQIRDFEQHIAENGTII 179

Query: 128 LSFYIN 133
             F+++
Sbjct: 180 FKFFLH 185


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.327    0.141    0.464 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,724,049
Number of Sequences: 1657284
Number of extensions: 9629865
Number of successful extensions: 21435
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 21423
Number of HSP's gapped (non-prelim): 9
length of query: 220
length of database: 575,637,011
effective HSP length: 98
effective length of query: 122
effective length of database: 413,223,179
effective search space: 50413227838
effective search space used: 50413227838
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 70 (32.3 bits)