Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001346-TA|BGIBMGA001346-PA|undefined
(1624 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g10270.1 68414.m01157 pentatricopeptide (PPR) repeat-containi... 39 0.032
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 38 0.042
At3g01560.1 68416.m00086 proline-rich family protein contains pr... 38 0.074
At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid t... 37 0.097
At3g59290.1 68416.m06609 epsin N-terminal homology (ENTH) domain... 36 0.17
At5g11350.1 68418.m01325 endonuclease/exonuclease/phosphatase fa... 35 0.39
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 35 0.39
At1g23540.1 68414.m02960 protein kinase family protein contains ... 35 0.39
At1g19220.1 68414.m02392 transcriptional factor B3 family protei... 35 0.39
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 35 0.52
At4g38890.1 68417.m05508 dihydrouridine synthase family protein ... 34 0.69
At1g30330.1 68414.m03709 auxin-responsive factor (ARF6) identica... 34 0.69
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 34 0.91
At2g20100.1 68415.m02348 ethylene-responsive family protein simi... 34 0.91
At1g64060.1 68414.m07256 respiratory burst oxidase protein F (Rb... 34 0.91
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 34 0.91
At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identica... 33 1.2
At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identica... 33 1.2
At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identica... 33 1.2
At3g54300.1 68416.m06001 synaptobrevin family protein similar to... 33 1.2
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 33 1.2
At4g32760.1 68417.m04661 VHS domain-containing protein / GAT dom... 33 1.6
At3g11850.2 68416.m01453 expressed protein contains Pfam profile... 33 1.6
At3g11850.1 68416.m01452 expressed protein contains Pfam profile... 33 1.6
At5g41410.1 68418.m05031 homeodomain protein (BEL1) identical to... 33 2.1
At5g38560.1 68418.m04662 protein kinase family protein contains ... 33 2.1
At3g06480.1 68416.m00750 DEAD box RNA helicase, putative similar... 33 2.1
At1g50620.1 68414.m05688 PHD finger family protein contains Pfam... 33 2.1
At5g56980.1 68418.m07112 expressed protein non-consensus CG dono... 32 2.8
At5g03330.2 68418.m00285 OTU-like cysteine protease family prote... 32 2.8
At5g03330.1 68418.m00284 OTU-like cysteine protease family prote... 32 2.8
At4g36540.2 68417.m05189 basic helix-loop-helix (bHLH) family pr... 32 2.8
At4g36540.1 68417.m05188 basic helix-loop-helix (bHLH) family pr... 32 2.8
At4g34440.1 68417.m04894 protein kinase family protein contains ... 32 2.8
At2g24630.1 68415.m02942 glycosyl transferase family 2 protein s... 32 2.8
At2g24230.1 68415.m02894 leucine-rich repeat transmembrane prote... 32 2.8
At1g72390.1 68414.m08373 expressed protein 32 2.8
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 32 2.8
At5g35980.1 68418.m04333 protein kinase family protein contains ... 32 3.7
At4g22100.1 68417.m03195 glycosyl hydrolase family 1 protein con... 32 3.7
At4g16280.2 68417.m02470 flowering time control protein / FCA ga... 32 3.7
At4g16280.1 68417.m02469 flowering time control protein / FCA ga... 32 3.7
At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (AB... 32 3.7
At3g24550.1 68416.m03083 protein kinase family protein contains ... 32 3.7
At1g22290.1 68414.m02787 14-3-3 protein GF14, putative (GRF10) s... 32 3.7
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 31 4.8
At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family... 31 4.8
At4g27595.1 68417.m03964 protein transport protein-related low s... 31 4.8
At3g24900.1 68416.m03122 disease resistance family protein / LRR... 31 4.8
At2g34170.1 68415.m04182 expressed protein contains Pfam profile... 31 4.8
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 31 4.8
At1g63730.1 68414.m07212 disease resistance protein (TIR-NBS-LRR... 31 4.8
At1g26110.1 68414.m03186 expressed protein 31 4.8
At1g17440.2 68414.m02133 transcription initiation factor IID (TF... 31 4.8
At1g17440.1 68414.m02132 transcription initiation factor IID (TF... 31 4.8
At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing ... 31 6.4
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 31 6.4
At1g08910.1 68414.m00991 zinc finger (MIZ type) family protein s... 31 6.4
At5g65630.1 68418.m08256 DNA-binding bromodomain-containing prot... 31 8.4
At5g01400.1 68418.m00053 expressed protein contains low similari... 31 8.4
At3g10070.1 68416.m01207 transcription initiation factor IID (TF... 31 8.4
At2g39340.1 68415.m04829 SAC3/GANP family protein contains Pfam ... 31 8.4
At2g30720.1 68415.m03747 thioesterase family protein similar to ... 31 8.4
At2g30590.1 68415.m03727 WRKY family transcription factor 31 8.4
At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to ... 31 8.4
>At1g10270.1 68414.m01157 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat;
similar to ESTs gb|R30192 and gb|AA651017
Length = 913
Score = 38.7 bits (86), Expect = 0.032
Identities = 54/241 (22%), Positives = 84/241 (34%), Gaps = 15/241 (6%)
Query: 1253 SPYQQNIPYVNERREVTPEQWFTLEETKAPPGLRDYQSIQATSQFPSCCQQTASGAGQQE 1312
S QQ + N+ P W ++ PG + QS S + S S Q
Sbjct: 678 SDNQQQQSWSNQTAGQQPPSW-----SRQAPGYQQQQSWSQQSGWSSPSGHQQSWTNQTA 732
Query: 1313 LNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQQSAIDYLQPPPQLNNSQ- 1371
QQ TP Q ++Q P QQ++ P Q Q+ Q Q N Q
Sbjct: 733 GQQQPWANQTPGQQQQWANQTPGQQQQLANQTPGQ-QQQWANQTPGQQQQWANQNNGHQQ 791
Query: 1372 --IYXXXXXXXXXVLEAPGTQSSHVYPQSPKQ----GEMFMQPCQIPGPSNVTQRGYVAS 1425
+ P Q + +Q + Q Q + Q G+ A
Sbjct: 792 PWANQNTGHQQSWANQTPSQQQPWANQTTGQQQGWGNQTTGQQQQWANQTAGQQSGWTAQ 851
Query: 1426 TPQHDASASNFQKQFVSVSPNFSINQQP--NQATPVLNSSQIAGPSNQDMYSVSKRSIKL 1483
+ +AS+ Q Q+++ P NQ P N L Q GPS++ + K+ ++L
Sbjct: 852 QQWSNQTASHQQSQWLNPVPGEVANQTPWSNSVDSHLPQQQEPGPSHECQETQEKKVVEL 911
Query: 1484 K 1484
+
Sbjct: 912 R 912
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 38.3 bits (85), Expect = 0.042
Identities = 21/54 (38%), Positives = 23/54 (42%)
Query: 1302 QQTASGAGQQELNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQQ 1355
QQ QQ+ QQ Q Q Q+ PP QQ Q PQH Q T QQ
Sbjct: 128 QQQQHHHHQQQQQQQQQQQQQQQQQQQQHQNQPPSQQQQQQSTPQHQQQPTPQQ 181
Score = 35.5 bits (78), Expect = 0.30
Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 1/113 (0%)
Query: 1250 RHDSPYQQNIPYVNERREVTPEQWFTLEETKAPPGLRDYQSIQATSQFPSCCQQTASGAG 1309
R Q P V+++++ +Q +++ + Q Q QQ
Sbjct: 87 REQQLQQSQHPQVSQQQQQQQQQQIQMQQLLLQRAQQQQQQQQQQHHHHQQQQQQQQQQQ 146
Query: 1310 QQELNQQSQVQTTPSSNIQRSHQLPPHYQQMS-QVVPQHTQHNTLQQSAIDYL 1361
QQ+ QQ Q Q P S Q+ P H QQ + Q PQ + L + + L
Sbjct: 147 QQQQQQQQQHQNQPPSQQQQQQSTPQHQQQPTPQQQPQRRDGSHLANGSANGL 199
Score = 31.5 bits (68), Expect = 4.8
Identities = 25/77 (32%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Query: 1295 SQFPSCCQQTASGAGQQELNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQ 1354
SQ P QQ QQ QQ +Q Q+ Q H+QQ Q Q Q Q
Sbjct: 94 SQHPQVSQQQQQQQQQQIQMQQLLLQRAQQQQ-QQQQQQHHHHQQQQQQQQQQQQQQQQQ 152
Query: 1355 QSAIDYLQPPPQLNNSQ 1371
Q QPP Q Q
Sbjct: 153 QQQ-HQNQPPSQQQQQQ 168
>At3g01560.1 68416.m00086 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 511
Score = 37.5 bits (83), Expect = 0.074
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 17/121 (14%)
Query: 576 EDELEYLKFQIFKWIHELVGDDKISNALDHADVLSQTIRSIPVPMLTLSQNPGNLKSSLP 635
+D+ E L+ Q+ K H++ +++L H D +Q+ +P+ L+ P P
Sbjct: 206 KDKQEILEAQLSK--HQVSNQHAKTHSL-HVDPTAQSPAPVPMQQFPLTSFPQ------P 256
Query: 636 PCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQSSNYAPAPSYPAQN-RNPPKYRRQSSP 694
P TA P+ PS P P L F + Q Y P PS+P NPP Y+ +
Sbjct: 257 PSSTAAPSQP--PSSQLP----PQLPTQFSSQQEP-YCPPPSHPQPPPSNPPPYQAPQTQ 309
Query: 695 T 695
T
Sbjct: 310 T 310
>At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein low similarity to
glucoamylase S1/S2 [Precursor] from Saccharomyces
cerevisiae [SP|P08640], proteophosphoglycan from
Leishmania major [GI:5420387]; contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 256
Score = 37.1 bits (82), Expect = 0.097
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 648 PSLSTPKNYTPALSHSFGTDQSSNYAPAPSYPAQNRNPPKYRRQSSPTAFASGPMIHNAG 707
P+ STP + P S + + + A PS PA + +PP R S P + +S P+ H++
Sbjct: 126 PAASTPVS-PPVESPTTSPSSAKSPAITPSSPAVSHSPPPVRHSSPPVSHSSPPVSHSSP 184
Query: 708 SVGR 711
R
Sbjct: 185 PTSR 188
>At3g59290.1 68416.m06609 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain;
similar to Af10-protein - Avena fatua, EMBL:U80041
Length = 1024
Score = 36.3 bits (80), Expect = 0.17
Identities = 68/264 (25%), Positives = 100/264 (37%), Gaps = 28/264 (10%)
Query: 639 TAQPTSHAGPSLSTPKNYTPALSHSFGTDQSSNYAPAPSYPAQNRNPPKYRRQSSPTAFA 698
T QP +AGP+ S P YTP + S++ P+ S+P Q P SS T +A
Sbjct: 614 TQQP-GYAGPATSQPPQYTPGV---------SSHPPSESFPHQ---PGSATSASSQTPYA 660
Query: 699 SGPMIHNAGSVGRMPIYAQAIPGGRLDYVQNIPHNMRRMSGSSNYASGTFVQNQLTDL-- 756
+ P + +AG Q P G V +P ++ + + S A+ N + D+
Sbjct: 661 TTPNV-SAGQFDGGSFMTQQ-PYGVTQQVHVVPSHIPQRTQSGPVAAFGNNNNIVGDMHQ 718
Query: 757 --SYNQISSLSPKGLGGNVIQNPVNNNLWEGRRMLGNFPASGESWPSNYNQTFASRPRSA 814
S SS +P N + + ++ G P PS+ Q S P +A
Sbjct: 719 PGSTPSSSSQTPYPTTPNAPSGQFDGGNFMTQQPYGVIP-QVHGVPSHIPQRTQSGPVAA 777
Query: 815 SFNXXXXXXXXXXXXXMSGPATFASGPMNLYPLP------DQMQQNMYPNFSNSHDGAQY 868
N +S T AS P +L PL Q Q+ P + D
Sbjct: 778 HGNSNNVVGDMFSPAGLSSLETSASQP-SLTPLTGAIEIVPQNQKKFEPKSTIWADTLSR 836
Query: 869 RNACCNITNASPNLPLAQIEDEFE 892
NI+ N PLA I +FE
Sbjct: 837 GLVNFNISGPKTN-PLADIGVDFE 859
>At5g11350.1 68418.m01325 endonuclease/exonuclease/phosphatase family
protein contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 754
Score = 35.1 bits (77), Expect = 0.39
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
Query: 1214 FQDPQGYDHFAQNMAYCSSYADANQDQSSYMIVGGDRHDSPYQQNIPYVNERREVTPEQW 1273
+ D G D F ++ S DAN + RH PY+Q+ P +++R++ Q
Sbjct: 55 YNDDAGRDQFVTGDSHFQSVHDAN-----FRF----RHGEPYRQHQPPLDQRQQPPFNQ- 104
Query: 1274 FTLEETKAPPGLRDYQSIQATSQFPSCCQQTASGAGQQELNQQSQVQTTPSSNIQRSHQL 1333
E PP +Q + +QFPS A NQ S+ S QR
Sbjct: 105 -NYEFRPPPPSRGQWQQFRQPNQFPSNQNYAACPPPPFYQNQMSRPPPQQSFR-QRPRSK 162
Query: 1334 PPHYQQ 1339
P Y++
Sbjct: 163 PSDYRE 168
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 35.1 bits (77), Expect = 0.39
Identities = 56/272 (20%), Positives = 96/272 (35%), Gaps = 12/272 (4%)
Query: 1289 QSIQATSQFPSCCQQTASGAGQQELNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQHT 1348
+ + S+ C + +G G N + TP + + PP+ ++ S+ P+ +
Sbjct: 381 ECLPVVSRPVDCSKDKCAGGGGGGSNPSPKPTPTPKAPEPKKEINPPNLEEPSKPKPEES 440
Query: 1349 QHNTLQQSAIDYLQPPPQLNNSQIYXXXXXXXXXVLEAPGTQSSHVYPQSPKQGEMFMQP 1408
QQ + P + +N + E+P T+ P+SPKQ +
Sbjct: 441 PKP--QQPSPKPETPSHEPSNPK----EPKPESPKQESPKTEQPKPKPESPKQESPKQEA 494
Query: 1409 CQIPGPSNVTQRGYVASTPQHDASASNFQKQFVSVSPNFSINQQPNQATPVLNSSQIAGP 1468
+ P + S+ Q K Q P Q TP S P
Sbjct: 495 PKPEQPKPKPESPKQESSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQP 554
Query: 1469 SNQDMYSVSKRSIKLKPGQLGTPEDVLVTIQTGPKTESQVPPETPDIPEADDIPEEVEQA 1528
Q+ + S K +P + TP+ PK E PP+T + P+ P +E
Sbjct: 555 PKQET-PKPEESPKPQPPKQETPKPEESPKPQPPKQEQ--PPKT-EAPKMGSPP--LESP 608
Query: 1529 VNDQAYITPQSKEIQPKYPPLKKKPTRVIDRQ 1560
V + Y K+ +P+ P + T+ Q
Sbjct: 609 VPNDPYDASPIKKRRPQPPSPSTEETKTTSPQ 640
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 35.1 bits (77), Expect = 0.39
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 630 LKSSLPPCCTAQPT-SHAGPSL-STPKNYTPALSHSFGTDQSSNYAPAPSYPAQNRNPPK 687
L S LPP + P S + P + STP P + S + S PAP + + NPP
Sbjct: 67 LPSILPPLTDSPPPPSDSSPPVDSTPSPPPPTSNESPSPPEDSETPPAPPNESNDNNPPP 126
Query: 688 YRRQSSPTAFASGPMI 703
+ SP + P +
Sbjct: 127 SQDLQSPPPSSPSPNV 142
>At1g19220.1 68414.m02392 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profile: PF02309 AUX/IAA family
Length = 1086
Score = 35.1 bits (77), Expect = 0.39
Identities = 46/185 (24%), Positives = 68/185 (36%), Gaps = 5/185 (2%)
Query: 1302 QQTASGAGQQELNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQQSAIDYL 1361
QQ S QQ QQ + +PS +Q QQ Q +P + Q SA+
Sbjct: 621 QQNLSQNPQQLQMQQQSSKPSPSQQLQLQLLQKLQQQQQQQSIPPVSSSLQPQLSALQQT 680
Query: 1362 QPPP--QLNNSQIYXXXXXXXXXVLEAPGTQSSHVYPQSPKQGEMFMQPCQIPGPSNVTQ 1419
Q QL +SQ + Q + +QG+M + G S+
Sbjct: 681 QSHQLQQLLSSQNQQPLAHGNNSFPASTFMQPPQIQVSPQQQGQMSNKNLVAAGRSHSGH 740
Query: 1420 RGYVASTPQHDASASNFQKQFVSVSPNFSINQQPNQATPVLNSSQI---AGPSNQDMYSV 1476
A + SA+N VS + S NQQ QA V S + A Q++Y+
Sbjct: 741 TDGEAPSCSTSPSANNTGHDNVSPTNFLSRNQQQGQAASVSASDSVFERASNPVQELYTK 800
Query: 1477 SKRSI 1481
++ I
Sbjct: 801 TESRI 805
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 34.7 bits (76), Expect = 0.52
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Query: 575 DEDELEYLKFQIFKWIHELVGDDKISNALDHADVLSQTIRSIPVPMLTLSQNPGNLKSSL 634
D+ E+ + Q+ K V +++ H + +Q S+P P + + P + L
Sbjct: 203 DKQEIVEAQLQLSKLQLSKVNQQPETHST-HVEPTAQPPASLPQPPASAAAPPSLTQQGL 261
Query: 635 PPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQSSNYAPA-PSYPAQNRNPP 686
PP QP + + LS P P L + F Q + P+ S P PP
Sbjct: 262 PPQQFIQPPA-SQHGLSPPSLQLPQLPNQFSPQQEPYFPPSGQSQPPPTIQPP 313
Score = 31.1 bits (67), Expect = 6.4
Identities = 40/194 (20%), Positives = 67/194 (34%), Gaps = 20/194 (10%)
Query: 1355 QSAIDYLQPPPQLNNSQIYXXXXXXXXXVLEAPGTQSSHVYPQSPKQGEMFMQPCQIPGP 1414
Q+ + L+ ++ +Q+ V + P T S+HV P + + P P
Sbjct: 195 QNGVQLLKDKQEIVEAQLQLSKLQLSK-VNQQPETHSTHVEPTAQPPASLPQPPASAAAP 253
Query: 1415 SNVTQRGYVASTPQHDASASNFQKQFVSVSPNFSINQQPNQATPVLNSSQIAGPSNQDMY 1474
++TQ+G PQ Q P+ + Q PNQ +P PS Q
Sbjct: 254 PSLTQQGL---PPQQFIQPP--ASQHGLSPPSLQLPQLPNQFSP--QQEPYFPPSGQSQ- 305
Query: 1475 SVSKRSIKLKPGQLGTPEDVLVTIQTGPKTESQVPPETPDIPEADDIPEEVEQAVNDQAY 1534
P + P Q+ + Q PP+ P P+ P +++
Sbjct: 306 ---------PPPTIQPPYQPPPPTQSLHQPPYQPPPQQPQYPQQP--PPQLQHPSGYNPE 354
Query: 1535 ITPQSKEIQPKYPP 1548
P ++ P PP
Sbjct: 355 EPPYPQQSYPPNPP 368
>At4g38890.1 68417.m05508 dihydrouridine synthase family protein
contains Pfam domain, PF01207: Dihydrouridine synthase
(Dus)
Length = 700
Score = 34.3 bits (75), Expect = 0.69
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 140 APKSATVTSETQASVQTMSREVETAPRMEPLKRNVAIPLSPQASRNPQDATRCDAVVSGL 199
A + V S Q SV + E M P+K+ P P S DA A SGL
Sbjct: 18 AKAALPVQSTKQFSVYEATSEELIERSMAPIKKEFLCPPPPSRSVKQNDAADVRAPQSGL 77
Query: 200 -QQNVTKQTLKKSRR 213
Q+ +K+ LK+ RR
Sbjct: 78 VQEKKSKRQLKRERR 92
>At1g30330.1 68414.m03709 auxin-responsive factor (ARF6) identical to
ARF6 [Arabidopsis thaliana] GI:4102600 (Science 276
(5320), 1865-1868 (1997))
Length = 933
Score = 34.3 bits (75), Expect = 0.69
Identities = 22/70 (31%), Positives = 29/70 (41%)
Query: 1289 QSIQATSQFPSCCQQTASGAGQQELNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQHT 1348
Q Q Q QQ S QQ+L+QQ Q Q + Q +P +Q SQ Q
Sbjct: 495 QQQQQQQQLSQQQQQQLSQQQQQQLSQQQQQQLSQQQQQQAYLGVPETHQPQSQAQSQSN 554
Query: 1349 QHNTLQQSAI 1358
H + QQ +
Sbjct: 555 NHLSQQQQQV 564
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 33.9 bits (74), Expect = 0.91
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Query: 633 SLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQS-SNYAPAPSYPAQNRNPPKYRRQ 691
S PP + P P S+P ++TPALS S T S + +P+P P+ + P +
Sbjct: 169 SQPPRSSVSPAQP--PKSSSPISHTPALSPSHATSHSPATPSPSPKSPSPVSHSPSHSPA 226
Query: 692 SSPT-AFASGPMIHNAGSVGRMPIY------AQAIPGGRLDYVQNIPHNMRRMSGSSNYA 744
+P+ + A P A + P + A A + P + S SS+ A
Sbjct: 227 HTPSHSPAHTPSHSPAHAPSHSPAHAPSHSPAHAPSHSPAHSPSHSPATPKSPSPSSSPA 286
Query: 745 SGTFVQNQLTDLSYNQISSLSP 766
+ +T S + +SS SP
Sbjct: 287 QSPATPSPMTPQSPSPVSSPSP 308
>At2g20100.1 68415.m02348 ethylene-responsive family protein similar
to Ethylene-regulated ER33 protein (GI:5669656)
[Lycopersicon esculentum]; PMID: 12679534; putative
bHLH133 transcription factor
Length = 362
Score = 33.9 bits (74), Expect = 0.91
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 613 IRSIPVPMLTLSQNPG---NLKSSLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQS 669
+ S PV LT + NP N+ L P SH PS + + P+L +F + +
Sbjct: 6 LESSPVQHLTAAGNPNWWNNVSRGLRPPTPLM--SHEPPSTTA---FIPSLLPNFFSSPT 60
Query: 670 SNYAPAPSYPAQNRNP 685
S+ + +PS+P N NP
Sbjct: 61 SSSSSSPSFPPPNSNP 76
>At1g64060.1 68414.m07256 respiratory burst oxidase protein F
(RbohF) (RbohAp108) / NADPH oxidase identical to
cytochrome b245 beta chain homolog RbohAp108
[GI:2654868], respiratory burst oxidase protein F
[gi:3242456], from Arabidopsis thaliana
Length = 944
Score = 33.9 bits (74), Expect = 0.91
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 8/139 (5%)
Query: 335 LHLNDNNMKRKTFRLIDYMFDNLNDGGPSLNELASFCLNRLQNLFTLATLNKDTTETKEI 394
L L D +R+ ++ D L + +N+ SF +RLQ F + N+D T+E
Sbjct: 231 LELFDALSRRRRLKVEKINHDELYEYWSQIND-ESFD-SRLQIFFDIVDKNEDGRITEEE 288
Query: 395 ISEVIKKSLIKFTQKNKLKLKTANLEDMTSKLINICKNNNVDTKNKVEIEIMALMMKNDF 454
+ E+I S NKL E+ + ++ + ++E + L+ K+ +
Sbjct: 289 VKEIIMLS----ASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETL-LLQKDTY 343
Query: 455 TN-NQAAEYTDQLIKQTCE 472
N +QA YT Q + Q +
Sbjct: 344 LNYSQALSYTSQALSQNLQ 362
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats, Pfam:PF00560;
contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 33.9 bits (74), Expect = 0.91
Identities = 35/117 (29%), Positives = 43/117 (36%), Gaps = 11/117 (9%)
Query: 1444 SPNFSINQQPNQATPVLNSSQIAGPSNQDMYSVSKRSIKLKPGQLGTPEDVLVTIQTGPK 1503
+P P P S + P N+ K S K +P + PED Q PK
Sbjct: 424 TPKTPEQPSPKPQPPKHESPKPEEPENKHELPKQKESPKPQPSK---PEDSPKPEQ--PK 478
Query: 1504 TESQVPPETPDIPEAD---DIPEEVEQAVNDQAY-ITPQSKEIQPKYPPLKKKPTRV 1556
E PE P IPE P E + D Y +P P PP K + TRV
Sbjct: 479 PEESPKPEQPQIPEPTKPVSPPNEAQGPTPDDPYDASPVKNRRSP--PPPKVEDTRV 533
>At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identical to
auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1150
Score = 33.5 bits (73), Expect = 1.2
Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 6/145 (4%)
Query: 1311 QELNQQSQVQTTP--SSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQQSAIDYLQPPPQLN 1368
Q+ QQ Q++T P S + + QL H Q Q VPQ+ +N QQ+A + +
Sbjct: 576 QQQTQQQQLRTQPLQSHSHPQPQQLQQHKLQQLQ-VPQNQLYNG-QQAAQQHQSQQASTH 633
Query: 1369 NSQIYXXXXXXXXXVLEAPGTQSSHVYPQSPKQGEMFMQPCQIPGPSNVTQRGYVASTPQ 1428
+ Q V+ P + + + Q +Q + Q G S T + V T +
Sbjct: 634 HLQPQLVSGSMASSVITPPSSSLNQSFQQQQQQSKQLQQAHHHLGAS--TSQSSVIETSK 691
Query: 1429 HDASASNFQKQFVSVSPNFSINQQP 1453
++ + Q S Q P
Sbjct: 692 SSSNLMSAPPQETQFSRQVEQQQPP 716
Score = 31.1 bits (67), Expect = 6.4
Identities = 38/162 (23%), Positives = 54/162 (33%), Gaps = 7/162 (4%)
Query: 1295 SQFPSCCQQTASGAGQQELNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQ 1354
SQ Q S Q+ QSQ Q +Q+ QL SQ + Q + Q
Sbjct: 501 SQQQQLQQLLHSSLNHQQQQSQSQQQQQQQQLLQQQQQL------QSQQHSNNNQSQSQQ 554
Query: 1355 QSAIDYLQPPPQLNNSQIYXXXXXXXXXVLEAPGTQSSHVYPQSPKQGEMFMQPCQIPGP 1414
Q + Q QL L Q SH +PQ + + +Q Q+P
Sbjct: 555 QQQLLQQQQQQQLQQQHQQPLQQQTQQQQLRTQPLQ-SHSHPQPQQLQQHKLQQLQVPQN 613
Query: 1415 SNVTQRGYVASTPQHDASASNFQKQFVSVSPNFSINQQPNQA 1456
+ AS + Q Q VS S S+ P+ +
Sbjct: 614 QLYNGQQAAQQHQSQQASTHHLQPQLVSGSMASSVITPPSSS 655
>At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identical to
auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1164
Score = 33.5 bits (73), Expect = 1.2
Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 6/145 (4%)
Query: 1311 QELNQQSQVQTTP--SSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQQSAIDYLQPPPQLN 1368
Q+ QQ Q++T P S + + QL H Q Q VPQ+ +N QQ+A + +
Sbjct: 575 QQQTQQQQLRTQPLQSHSHPQPQQLQQHKLQQLQ-VPQNQLYNG-QQAAQQHQSQQASTH 632
Query: 1369 NSQIYXXXXXXXXXVLEAPGTQSSHVYPQSPKQGEMFMQPCQIPGPSNVTQRGYVASTPQ 1428
+ Q V+ P + + + Q +Q + Q G S T + V T +
Sbjct: 633 HLQPQLVSGSMASSVITPPSSSLNQSFQQQQQQSKQLQQAHHHLGAS--TSQSSVIETSK 690
Query: 1429 HDASASNFQKQFVSVSPNFSINQQP 1453
++ + Q S Q P
Sbjct: 691 SSSNLMSAPPQETQFSRQVEQQQPP 715
Score = 31.1 bits (67), Expect = 6.4
Identities = 38/162 (23%), Positives = 54/162 (33%), Gaps = 7/162 (4%)
Query: 1295 SQFPSCCQQTASGAGQQELNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQ 1354
SQ Q S Q+ QSQ Q +Q+ QL SQ + Q + Q
Sbjct: 500 SQQQQLQQLLHSSLNHQQQQSQSQQQQQQQQLLQQQQQL------QSQQHSNNNQSQSQQ 553
Query: 1355 QSAIDYLQPPPQLNNSQIYXXXXXXXXXVLEAPGTQSSHVYPQSPKQGEMFMQPCQIPGP 1414
Q + Q QL L Q SH +PQ + + +Q Q+P
Sbjct: 554 QQQLLQQQQQQQLQQQHQQPLQQQTQQQQLRTQPLQ-SHSHPQPQQLQQHKLQQLQVPQN 612
Query: 1415 SNVTQRGYVASTPQHDASASNFQKQFVSVSPNFSINQQPNQA 1456
+ AS + Q Q VS S S+ P+ +
Sbjct: 613 QLYNGQQAAQQHQSQQASTHHLQPQLVSGSMASSVITPPSSS 654
>At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identical to
auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1165
Score = 33.5 bits (73), Expect = 1.2
Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 6/145 (4%)
Query: 1311 QELNQQSQVQTTP--SSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQQSAIDYLQPPPQLN 1368
Q+ QQ Q++T P S + + QL H Q Q VPQ+ +N QQ+A + +
Sbjct: 576 QQQTQQQQLRTQPLQSHSHPQPQQLQQHKLQQLQ-VPQNQLYNG-QQAAQQHQSQQASTH 633
Query: 1369 NSQIYXXXXXXXXXVLEAPGTQSSHVYPQSPKQGEMFMQPCQIPGPSNVTQRGYVASTPQ 1428
+ Q V+ P + + + Q +Q + Q G S T + V T +
Sbjct: 634 HLQPQLVSGSMASSVITPPSSSLNQSFQQQQQQSKQLQQAHHHLGAS--TSQSSVIETSK 691
Query: 1429 HDASASNFQKQFVSVSPNFSINQQP 1453
++ + Q S Q P
Sbjct: 692 SSSNLMSAPPQETQFSRQVEQQQPP 716
Score = 31.1 bits (67), Expect = 6.4
Identities = 38/162 (23%), Positives = 54/162 (33%), Gaps = 7/162 (4%)
Query: 1295 SQFPSCCQQTASGAGQQELNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQ 1354
SQ Q S Q+ QSQ Q +Q+ QL SQ + Q + Q
Sbjct: 501 SQQQQLQQLLHSSLNHQQQQSQSQQQQQQQQLLQQQQQL------QSQQHSNNNQSQSQQ 554
Query: 1355 QSAIDYLQPPPQLNNSQIYXXXXXXXXXVLEAPGTQSSHVYPQSPKQGEMFMQPCQIPGP 1414
Q + Q QL L Q SH +PQ + + +Q Q+P
Sbjct: 555 QQQLLQQQQQQQLQQQHQQPLQQQTQQQQLRTQPLQ-SHSHPQPQQLQQHKLQQLQVPQN 613
Query: 1415 SNVTQRGYVASTPQHDASASNFQKQFVSVSPNFSINQQPNQA 1456
+ AS + Q Q VS S S+ P+ +
Sbjct: 614 QLYNGQQAAQQHQSQQASTHHLQPQLVSGSMASSVITPPSSS 655
>At3g54300.1 68416.m06001 synaptobrevin family protein similar to
vesicle-associated membrane protein 7B (At VAMP7B),
Arabidopsis thaliana, EMBL:AF025333
Length = 240
Score = 33.5 bits (73), Expect = 1.2
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 361 GPSLNELASFCLNRLQNLFTLATLNKDTTETKEIISEVIKKSLIKFTQKNKLKLKTANLE 420
GP L E +C++ + + L+ L TE K I+ + I+K L + + L KT NL+
Sbjct: 130 GPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQ 189
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 33.5 bits (73), Expect = 1.2
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 610 SQTIRSIPVPMLTLSQNPGNLKSSLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQS 669
S S P P +T+ P + + PP ++ P S+ P S+ N P ++ + S
Sbjct: 115 SSNPNSNPNPPVTVPNPPESSSNPNPPDSSSNPNSNPNPPESS-SNPNPPVTVPNPPESS 173
Query: 670 SNYAPAPSYPAQNRNPP 686
SN P P + N NPP
Sbjct: 174 SN--PNPPESSSNPNPP 188
Score = 31.1 bits (67), Expect = 6.4
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 623 LSQNPGNLKSSLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQSSNYAPAPSYPAQN 682
LS PG + PP ++ P S+ P S+ P D SSN P+ P
Sbjct: 77 LSPPPGPITLPNPPDSSSNPNSNPNPPESSSNPNPP--------DSSSNPNSNPNPPVTV 128
Query: 683 RNPPKYRRQSSPTAFASGP 701
NPP+ +P +S P
Sbjct: 129 PNPPESSSNPNPPDSSSNP 147
>At4g32760.1 68417.m04661 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 838
Score = 33.1 bits (72), Expect = 1.6
Identities = 32/105 (30%), Positives = 39/105 (37%), Gaps = 6/105 (5%)
Query: 601 NALDHADVLSQTIRSIPVPMLTLSQNPGNLKSSLPPCCTAQPTSHAGPS-LSTPKNYTPA 659
NAL D+ S + P P S NP L P QP S AG + L + P
Sbjct: 525 NALALIDMFSDNTNN-PSPATAPSGNPAQ-NIPLNPQGHQQPNSQAGEAGLQQSNGFAPQ 582
Query: 660 LSHSFGTDQSSNY---APAPSYPAQNRNPPKYRRQSSPTAFASGP 701
+ +S S +P S PAQ P Y TAF P
Sbjct: 583 VGYSQFEQPSYGQGVSSPWSSQPAQQPVQPSYEGAQDSTAFPPPP 627
>At3g11850.2 68416.m01453 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 504
Score = 33.1 bits (72), Expect = 1.6
Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 16/197 (8%)
Query: 1101 DEMKDEVDEVLLGMDIDHWFSDLPLVQSEDNYECVQQR--RLRDLLTKKIHDIEKRPNTS 1158
DE++ E + +D FS+ P VQ E+ E +++ + + H++E+ S
Sbjct: 32 DELQTEKRFSIPELDDLDMFSN-PRVQIENECELLRETVSNQQQTIQDLYHELEQERIAS 90
Query: 1159 EEAIDLEIKQETLRVLQKLHLRVETAELQFMAGELLNRLKNRNKA--GFMTQR----KSV 1212
A D +K +K + +E +LQ E LN +A + QR +++
Sbjct: 91 STAADETVKMIQTLEREKAKIDLELKQLQRSVDETLNYENQEIEALENMVYQRDQTIQAL 150
Query: 1213 AFQDPQGYDHFAQNMAYCSSYADANQ---DQSSYMIVGGDRHDSPYQQNIPY---VNERR 1266
F + Q Y H + + AD + ++ MI +D P Q P +NE +
Sbjct: 151 TF-ETQAYKHRMMSFGLTEAEADGERSLLSRNPSMIDFSSEYDCPTQDYPPLKCNINENQ 209
Query: 1267 EVTPEQWFTLEETKAPP 1283
+ + ++ PP
Sbjct: 210 DPLEADIYVADDENYPP 226
>At3g11850.1 68416.m01452 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 504
Score = 33.1 bits (72), Expect = 1.6
Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 16/197 (8%)
Query: 1101 DEMKDEVDEVLLGMDIDHWFSDLPLVQSEDNYECVQQR--RLRDLLTKKIHDIEKRPNTS 1158
DE++ E + +D FS+ P VQ E+ E +++ + + H++E+ S
Sbjct: 32 DELQTEKRFSIPELDDLDMFSN-PRVQIENECELLRETVSNQQQTIQDLYHELEQERIAS 90
Query: 1159 EEAIDLEIKQETLRVLQKLHLRVETAELQFMAGELLNRLKNRNKA--GFMTQR----KSV 1212
A D +K +K + +E +LQ E LN +A + QR +++
Sbjct: 91 STAADETVKMIQTLEREKAKIDLELKQLQRSVDETLNYENQEIEALENMVYQRDQTIQAL 150
Query: 1213 AFQDPQGYDHFAQNMAYCSSYADANQ---DQSSYMIVGGDRHDSPYQQNIPY---VNERR 1266
F + Q Y H + + AD + ++ MI +D P Q P +NE +
Sbjct: 151 TF-ETQAYKHRMMSFGLTEAEADGERSLLSRNPSMIDFSSEYDCPTQDYPPLKCNINENQ 209
Query: 1267 EVTPEQWFTLEETKAPP 1283
+ + ++ PP
Sbjct: 210 DPLEADIYVADDENYPP 226
>At5g41410.1 68418.m05031 homeodomain protein (BEL1) identical to cDNA
homeobox protein (BEL1) GI:28202124
Length = 611
Score = 32.7 bits (71), Expect = 2.1
Identities = 42/172 (24%), Positives = 62/172 (36%), Gaps = 17/172 (9%)
Query: 1199 NRNKAGFMTQRKSVAFQDPQGYDHFAQNMAYCSSYADANQ---DQSSYMIVGGDRHDSPY 1255
N N + K + G DH + S D NQ D SS M + +D P
Sbjct: 49 NSNMGMMIDFSKQQQIRMTSGSDHHHHHHQ-TSGGTDQNQLLEDSSSAMRLCNVNNDFPS 107
Query: 1256 QQNIPYVNERREVTPEQWFTLEETKAPPGLRDYQSIQATSQFPSCCQQTASGAGQQELNQ 1315
+ N +ER P Q +L + + P QS + Q QQ G + Q
Sbjct: 108 EVN----DERPPQRPSQGLSLSLSSSNPTSISLQSFELRPQ-----QQQQQGYSGNKSTQ 158
Query: 1316 QSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQQSAIDYLQPPPQL 1367
+Q T + + H+Q + QH H+ Q + YL P +L
Sbjct: 159 HQNLQHTQMMMMMMNS----HHQNNNNNNHQHHNHHQFQIGSSKYLSPAQEL 206
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 32.7 bits (71), Expect = 2.1
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 612 TIRSIPVPMLTLSQNPGNLKSSLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQSSN 671
T+ S P P + ++ P + ++ PP Q S P ++P P ++ S
Sbjct: 83 TVASSPPPPVVIASPPPSTPATTPPA-PPQTVSPPPPPDASPSPPAPTTTNPPPKPSPSP 141
Query: 672 YAPAPSYPAQNRNPPKYRRQS-SPTAFASGP 701
PS P + +PPK + +PT S P
Sbjct: 142 PGETPSPPGETPSPPKPSPSTPTPTTTTSPP 172
>At3g06480.1 68416.m00750 DEAD box RNA helicase, putative similar to
RNA helicase DRH1 [Arabidopsis thaliana] GI:3149952;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain, PF00397:
WW domain
Length = 1088
Score = 32.7 bits (71), Expect = 2.1
Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 4/116 (3%)
Query: 1292 QATSQFPSCCQQTASGAGQQELNQQSQVQTTPSSNIQRSHQLPPH-YQQMSQVVPQHTQH 1350
Q QFPS Q QQ QQ Q+ Q+S + PH + S Q T
Sbjct: 98 QQPQQFPS--QHVRPQMMQQHPAQQMPQQSGQQFPQQQSQSMVPHPHGHPSVQTYQPTTQ 155
Query: 1351 NTLQQSAIDYLQPPPQLNNSQIYXXXXXXXXXV-LEAPGTQSSHVYPQSPKQGEMF 1405
Q + Q P QL++ + ++ G Q+SH PQ G+ F
Sbjct: 156 QQQQGMQNQHSQMPQQLSHQYAHSQQHYMGFRPHMQTQGLQNSHQTPQGGPHGQQF 211
Score = 30.7 bits (66), Expect = 8.4
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 75 KHGSLSRSPSRQPQFGTSSWRISRSSTAHQPKYRDDEPTRDGPGGHDRSCNVRRVESLKG 134
+ S SRS SR + S SRS + + + R +RD GGH+RS + R S
Sbjct: 967 RSSSYSRSRSRSGSYSRSR---SRSRSWSRSRSRSPRHSRDR-GGHNRSRSYSRSPSPVY 1022
Query: 135 EKCRRAPK 142
E+ RAP+
Sbjct: 1023 ERRDRAPR 1030
>At1g50620.1 68414.m05688 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 629
Score = 32.7 bits (71), Expect = 2.1
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 5/122 (4%)
Query: 1252 DSPYQQNIPYVNERREVT-PEQWFTLEETKAPPGLRDYQSIQ--ATSQFPSC-CQQTASG 1307
D+ +Q P N+ E P + + ET PP L + ++ AT + S CQ S
Sbjct: 501 DANFQTQAPTGNDDAESDDPSEPVSHSETLNPPELEKKEVMRKDATERSVSADCQDKNSK 560
Query: 1308 A-GQQELNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQQSAIDYLQPPPQ 1366
+ L ++ T +S Q Q + Q + P + + Q+ QPP Q
Sbjct: 561 IIAESSLQEEISASQTENSPTQPPSQSDTDHSQQQKTTPNVEEEKSASQAENSPTQPPSQ 620
Query: 1367 LN 1368
N
Sbjct: 621 SN 622
>At5g56980.1 68418.m07112 expressed protein non-consensus CG donor
splice site at exon 1, GA donor splice site at exon 3
Length = 379
Score = 32.3 bits (70), Expect = 2.8
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 543 SEIFRQVAVNDLTDDIIDRHKYLEMNPS---KRKSDEDELEYLKFQIFKWIHELVGDDKI 599
+E+F A +D+ D H Y + NP+ + S D ++ + FK+ H++ G D
Sbjct: 81 TELFSMTAHHDIIGS--DLHVYPDPNPAPLQRAPSLLDRVKSINMSYFKFPHDVTGSDPH 138
Query: 600 SNALDHADV 608
S++ H D+
Sbjct: 139 SHSHSHLDL 147
>At5g03330.2 68418.m00285 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine protease
Length = 356
Score = 32.3 bits (70), Expect = 2.8
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 1419 QRGYVAS-TPQHDASASNFQKQFVSVSPNF--SINQQPNQATPVLNSSQIAGPSNQDMYS 1475
Q GY + + ++ A N Q V S + + N Q ++ +N + PS+ D Y
Sbjct: 98 QEGYTNNYSNNNNGYAWNDQSPAVDYSSEWIGNDNDQDGRSDDSVNVFSCSSPSDTDEYV 157
Query: 1476 VSKRSIKLKP-GQLGTPEDVLVTIQTGPKTESQVPPETPDIPEADDIPEEVE 1526
S S + G+ G + +V I PK ++PPE + + + + +E
Sbjct: 158 YSWESDQCDADGEFGRRLNQMVPIPYIPKINGEIPPEEEAVSDHERLRNRLE 209
>At5g03330.1 68418.m00284 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine protease
Length = 356
Score = 32.3 bits (70), Expect = 2.8
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 1419 QRGYVAS-TPQHDASASNFQKQFVSVSPNF--SINQQPNQATPVLNSSQIAGPSNQDMYS 1475
Q GY + + ++ A N Q V S + + N Q ++ +N + PS+ D Y
Sbjct: 98 QEGYTNNYSNNNNGYAWNDQSPAVDYSSEWIGNDNDQDGRSDDSVNVFSCSSPSDTDEYV 157
Query: 1476 VSKRSIKLKP-GQLGTPEDVLVTIQTGPKTESQVPPETPDIPEADDIPEEVE 1526
S S + G+ G + +V I PK ++PPE + + + + +E
Sbjct: 158 YSWESDQCDADGEFGRRLNQMVPIPYIPKINGEIPPEEEAVSDHERLRNRLE 209
>At4g36540.2 68417.m05189 basic helix-loop-helix (bHLH) family
protein contains Pfam domain, PF00010: Helix-loop-helix
DNA-binding domain
Length = 302
Score = 32.3 bits (70), Expect = 2.8
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 63 EVLERLDTH---SPDKHGSLSRSPSRQPQFGTSSWRISRSSTAHQPKYRDDEPTRDGPGG 119
E L+R++++ + D+ S P P + T+ ISR+S+ H EP ++ G
Sbjct: 32 EELKRVESYLGNNNDELQSFRHFPEFGPDYDTTDGCISRTSSFHM------EPVKNN--G 83
Query: 120 HDRSCNVRRVESLKGEKCRRAPKSATVTSETQASVQTMSREVETAPRME 168
H R+ ++ +G+ +R K ET+ S++ S T E
Sbjct: 84 HSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSE 132
>At4g36540.1 68417.m05188 basic helix-loop-helix (bHLH) family
protein contains Pfam domain, PF00010: Helix-loop-helix
DNA-binding domain
Length = 304
Score = 32.3 bits (70), Expect = 2.8
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 63 EVLERLDTH---SPDKHGSLSRSPSRQPQFGTSSWRISRSSTAHQPKYRDDEPTRDGPGG 119
E L+R++++ + D+ S P P + T+ ISR+S+ H EP ++ G
Sbjct: 32 EELKRVESYLGNNNDELQSFRHFPEFGPDYDTTDGCISRTSSFHM------EPVKNN--G 83
Query: 120 HDRSCNVRRVESLKGEKCRRAPKSATVTSETQASVQTMSREVETAPRME 168
H R+ ++ +G+ +R K ET+ S++ S T E
Sbjct: 84 HSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSE 132
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 32.3 bits (70), Expect = 2.8
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 635 PPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQSSNYAPAPSYPAQNRNPPKYRRQSSP 694
PP P++ + P + P + P+ + D S++++P P+ P Q +PP S P
Sbjct: 19 PPSNGTSPSNESSPP-TPPSSPPPSSISAPPPDISASFSPPPAPPTQETSPPTSPSSSPP 77
Query: 695 TAFASGP 701
P
Sbjct: 78 VVANPSP 84
>At2g24630.1 68415.m02942 glycosyl transferase family 2 protein
similar to cellulose synthase from Agrobacterium
tumeficiens [gi:710492] and Agrobacterium radiobacter
[gi:710493]; contains Pfam glycosyl transferase, group 2
family protein domain PF00535
Length = 690
Score = 32.3 bits (70), Expect = 2.8
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 1487 QLGTPEDVLVTIQTGPKTESQVPPETPDIPEADDIPEEVEQAVNDQAYITPQSKEIQPKY 1546
QLG+ + +VT + G +ES + T E++ +P ++ + V+D + E Q K
Sbjct: 573 QLGSSYEWIVTKKAGRSSESDLLALTDK--ESEKMPNQILRGVSDSELLEISQVEEQKKQ 630
Query: 1547 PPLKKKPTRVIDRQ 1560
P KK ++ ++
Sbjct: 631 PVSVKKTNKIFHKE 644
>At2g24230.1 68415.m02894 leucine-rich repeat transmembrane protein
kinase, putative
Length = 853
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 724 LDYVQNIPHNMRRMSGSSNYASGTFVQNQLTDLSYNQISSLSPKGL 769
L+ ++N+ + ++SGS + G F Q +L D+SYN S P+ +
Sbjct: 114 LNTLKNLNLSFNKISGSFSSNVGNFGQLELLDISYNNFSGAIPEAV 159
>At1g72390.1 68414.m08373 expressed protein
Length = 1088
Score = 32.3 bits (70), Expect = 2.8
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 10/104 (9%)
Query: 1302 QQTASGAGQQELNQQSQVQTTPSSNIQRSHQLPPHYQQMSQ-VVPQHTQHNTLQQSAIDY 1360
QQ QQ+L Q Q+Q S Q+ Q P QQ+ Q PQ Q QQ+
Sbjct: 928 QQLQQQPQQQQLQHQQQLQQPMSQPSQQLAQSPQQQQQLQQHEQPQQAQQQ--QQATASP 985
Query: 1361 LQ---PPPQLNNSQIYXXXXXXXXXVLEAPGTQSSHVYPQSPKQ 1401
LQ PPQ+ + + ++ Q S P SP+Q
Sbjct: 986 LQSVLSPPQVGSP----SAGITQQQLQQSSPQQMSQRTPMSPQQ 1025
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 32.3 bits (70), Expect = 2.8
Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 5/98 (5%)
Query: 609 LSQTIRSIPVPMLTLSQNPGNLKSSLPPCCTAQPTSHAGP-----SLSTPKNYTPALSHS 663
+S T+R +P P + +P + PP P+ A P +S TP S
Sbjct: 432 MSPTVRVLPPPPPSSKMSPTFRATPPPPSSKMSPSFRATPPPPSSKMSPSFRATPPPPSS 491
Query: 664 FGTDQSSNYAPAPSYPAQNRNPPKYRRQSSPTAFASGP 701
+ Y P P P +PP + SP+ A P
Sbjct: 492 KMSPSVKAYPPPPPPPEYEPSPPPPSSEMSPSVRAYPP 529
>At5g35980.1 68418.m04333 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 956
Score = 31.9 bits (69), Expect = 3.7
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 1265 RREVTPEQWFTLEETKAPPG----LRDYQSIQATSQFPSCCQQTASGAGQQELNQQSQVQ 1320
+R P Q F+ ET +PP R Q I + P Q + S GQQ + + +
Sbjct: 831 QRRYAPNQAFSQVETGSPPSNDPHARFGQHIPGSQYIPHVSQNSPSRLGQQPPQRYNHGR 890
Query: 1321 TTPSSNIQRSH---QLPP 1335
+ R+H QLPP
Sbjct: 891 PNAGRTMDRNHMNAQLPP 908
>At4g22100.1 68417.m03195 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; similar to hydroxyisourate hydrolase
(GI:19569603) [Glycine max]; furostanol glycoside
26-O-beta-glucosidase F26G,Costus speciosus,
PATCHX:S78099
Length = 507
Score = 31.9 bits (69), Expect = 3.7
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 901 QIPISSSNPQEQAIGDKARLGIFNGIMIAVSKLKLEPTKFNNPVYCQDV 949
++P+ S EQ G +GI + + +V+ +K++P+ NP + D+
Sbjct: 302 RLPVFSKEESEQVKGSSDFIGIIHYLAASVTSIKIKPSISGNPDFYSDM 350
>At4g16280.2 68417.m02470 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 747
Score = 31.9 bits (69), Expect = 3.7
Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 1312 ELNQQSQVQTTPSSNIQRSH-QLPPHYQQMSQVVPQHTQHNTLQQSAIDYLQPPPQLNNS 1370
E QQ Q Q IQ+S QL P QQ Q V Q Q LQQ L P P +++
Sbjct: 629 EREQQKQQQHQEKPTIQQSQTQLQP-LQQQPQQVQQQYQGQQLQQPFYSSLYPTPGASHN 687
Query: 1371 QIY 1373
Y
Sbjct: 688 TQY 690
>At4g16280.1 68417.m02469 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 505
Score = 31.9 bits (69), Expect = 3.7
Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 1312 ELNQQSQVQTTPSSNIQRSH-QLPPHYQQMSQVVPQHTQHNTLQQSAIDYLQPPPQLNNS 1370
E QQ Q Q IQ+S QL P QQ Q V Q Q LQQ L P P +++
Sbjct: 387 EREQQKQQQHQEKPTIQQSQTQLQP-LQQQPQQVQQQYQGQQLQQPFYSSLYPTPGASHN 445
Query: 1371 QIY 1373
Y
Sbjct: 446 TQY 448
>At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (ABI3)
identical to abscisic acid-insensitive protein 3
GI:16146 SP:Q01593 from [Arabidopsis thaliana], (Plant
Cell 4 (10), 1251-1261 (1992))
Length = 720
Score = 31.9 bits (69), Expect = 3.7
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 625 QNPG-NLKSSLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQSSNYAPAPSYPAQNR 683
QNP N + +PP + T + PS P P +F +D Y PAP+YP Q
Sbjct: 330 QNPNPNNNNLIPP---SDQTCFS-PSTWVPP---PPQQQAFVSDPGFGYMPAPNYPPQPE 382
Query: 684 NPPKYRRQSS-PTAFASGPMIH 704
P S P SGPM H
Sbjct: 383 FLPLLESPPSWPPPPQSGPMPH 404
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 31.9 bits (69), Expect = 3.7
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 615 SIPVPMLTLSQNPGN--LKSSLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQSSNY 672
S P P T S P + S+ PP + P S PS P + TP L + +
Sbjct: 32 SSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPS--PPGSLTPPLPQPSPSAPITPS 89
Query: 673 APAPSYPAQNRNPPKYRRQSSPTAFASGP 701
P+P+ P+ R+PP + T S P
Sbjct: 90 PPSPTTPSNPRSPPSPNQGPPNTPSGSTP 118
>At1g22290.1 68414.m02787 14-3-3 protein GF14, putative (GRF10)
similar to 14-3-3 protein GF14 epsilon GI:5802798 from
[Arabidopsis thaliana]
Length = 196
Score = 31.9 bits (69), Expect = 3.7
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 393 EIISEVIKKSLIKFTQKNKLKLKT--ANLEDMTSKLIN----ICKNNNVDTKNKVEIEIM 446
EI+S +++K K ++N KLK +ED +K+ N + + + V+ ++
Sbjct: 66 EILSSIVQKEESKGNEENVKKLKNYRNKVEDELAKICNDILSVINKQLIPSSTTVDSSVL 125
Query: 447 ALMMKNDFTNN-QAAEYTDQ 465
M DF++N ++ E TDQ
Sbjct: 126 FYNMLADFSSNAESKEATDQ 145
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 31.5 bits (68), Expect = 4.8
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 626 NPGNLKSSLPPCCTAQPTSHAGPSLSTPKN-YTPALSHSFGTDQSSNYAPAPSYPAQNRN 684
+P + SSL T+ P H G TP + TP+ S S S + +P+ A
Sbjct: 650 SPSDTPSSLVSPSTSPPAGHLGSPSDTPSSVVTPSASPSTSPSASPSVSPSAFPSASPSA 709
Query: 685 PPKYRRQSSPTAFAS 699
P SP+A S
Sbjct: 710 SPSASPSVSPSASPS 724
>At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family
protein
Length = 513
Score = 31.5 bits (68), Expect = 4.8
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 1265 RREVTPEQWFTLEETKAPPGLRDYQSIQATSQFP-SCCQQTASGAGQQELNQQSQVQTTP 1323
+++ TP+ F ++T +Q Q S F S QQT S Q + Q + + + P
Sbjct: 7 QQQQTPQPLFQTQQTSL------FQPQQTNSIFSQSQPQQTNSIFSQSQPQQTNSIFSQP 60
Query: 1324 SSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQQ 1355
Q S P +QQ Q + Q Q QQ
Sbjct: 61 QQQQQTSLFQPQQFQQQQQQLNQQQQQQVQQQ 92
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 31.5 bits (68), Expect = 4.8
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 384 LNKDTTETKEII-SEVIKKSLIKFTQKNKLKLKTANLEDMTSKLINICKNNNVDTKNKVE 442
L+ + + K ++ S+ KKS +KLK + L K ++I +N D + +E
Sbjct: 234 LSSELSRLKALVGSDEQKKSNEDDEVVSKLKSEIEMLRGKLEK-VSILENTLKDQEESIE 292
Query: 443 ---IEIMALMMKNDFTNNQAAEYTDQLIKQTCE 472
+++ A M + NN AAE+ +++ KQ E
Sbjct: 293 LLHVDLQAAKMVESYANNLAAEWKNEVDKQVEE 325
>At3g24900.1 68416.m03122 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 884
Score = 31.5 bits (68), Expect = 4.8
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 475 FEGPPPMYPRNYVVFQNTQNSIQGLNESDNFSVAPINERDIDINL---KFYKNQLVQAVE 531
F GP P P N+++ +N+++G ++ AP+ D+ N K ++ L +
Sbjct: 521 FTGPIPPCPSNFLILNLRKNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSAL 580
Query: 532 QWLTSVTGTGLSEIF 546
Q+L SV G+ + F
Sbjct: 581 QFL-SVDHNGIKDTF 594
>At2g34170.1 68415.m04182 expressed protein contains Pfam profile:
PF05097 protein of unknown function (DUF688)
Length = 523
Score = 31.5 bits (68), Expect = 4.8
Identities = 44/230 (19%), Positives = 87/230 (37%), Gaps = 8/230 (3%)
Query: 1330 SHQLPPHYQQMSQVVPQ-HTQHNTLQQSAIDYLQPPPQLNNSQIYXXXXXXXXXVLEAPG 1388
S + P H Q S V Q ++ ++++ A+DY Q + S ++ E
Sbjct: 228 SLRTPSHDQVKSSKVAQLKSRFQSVKKLALDYKQKLGSIAQSPVHPSVGKKFNFGSEQHE 287
Query: 1389 TQSSHVYPQSPKQGEMFMQPCQIPGPSN-VTQRGYVASTPQHDASASNFQKQFVSVSPNF 1447
++SS P SP + M P + G S+ + G+ + + + +N + + N
Sbjct: 288 SKSSASRPSSPYRQNGCMSPYRSVGNSSPLHAAGFPGTRKEAEVMRANRLNKHIR---NI 344
Query: 1448 SINQQPNQATPVLNSSQIAGPSNQDMYSVSKRSIKL-KPGQLGTPEDVLVTIQTGPKTES 1506
S + + + + +Y S+ S + + + + TI P+ E
Sbjct: 345 SKSHESLYPKSTKQDCSTSSAMEKTLYVDSENSPRTSNENRSSNVKKLPETISEEPEMEG 404
Query: 1507 QVPPETPDIP--EADDIPEEVEQAVNDQAYITPQSKEIQPKYPPLKKKPT 1554
+ P ++ E I V+ D+ ++ P PP KKP+
Sbjct: 405 KKPKAVRELKAVETLSISSGVKMMKADELGKNNSGCDLSPLAPPPPKKPS 454
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 31.5 bits (68), Expect = 4.8
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 12/163 (7%)
Query: 69 DTHSPDK-HGSLSRSPSRQPQFGTSSWRISRSSTAHQPKYRDDEPTRDGPGGHDRSCNVR 127
D S +K G S S P S + R H+ ++D R + R
Sbjct: 720 DLKSAEKVKGVESNKKSTDPHVKKDSRDVERP---HRTNSKEDRGKRKEKEKEEERSRHR 776
Query: 128 RVESLKGEKCRRAPKSATVTSETQASVQTMSREVETAPRMEPLKRNVAIPLSPQASRNPQ 187
R E+ +K RR+P S + +++ ++ R V +P KR+ SP + +
Sbjct: 777 RAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSPVRSRRKRS-----SPSSDESSD 831
Query: 188 DATRCDAVVSGLQQNVTKQTLKK--SRRTPTGVHQQQALNTVF 228
D+ R + + ++ ++ S R+P H Q NT++
Sbjct: 832 DSKRKSSSKRKNRSPSPGKSRRRHVSSRSPHSKHSQHK-NTLY 873
>At1g63730.1 68414.m07212 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 966
Score = 31.5 bits (68), Expect = 4.8
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 334 LLHLNDNNMKRKTFRLIDYMFDNLNDGGPSLNELASFCLNRLQNLFTLATLNKDTTETKE 393
+LH +N++ RK ++ +DNL+ L L +F N N A L + +
Sbjct: 405 ILHRQENSLDRKIEGVLRVGYDNLHKNDQFLFLLIAFFFNYQDNDHVKAMLGDSKLDVRY 464
Query: 394 IISEVIKKSLIKFTQKNKL 412
+ + KSLI+ + K +
Sbjct: 465 GLKTLAYKSLIQISIKGDI 483
>At1g26110.1 68414.m03186 expressed protein
Length = 611
Score = 31.5 bits (68), Expect = 4.8
Identities = 45/182 (24%), Positives = 68/182 (37%), Gaps = 25/182 (13%)
Query: 1335 PHYQQMSQVVPQH--TQHNTLQQSAI--DYLQPPPQLNNSQIYXXXXXXXXXVLEAPGTQ 1390
P Q S + P H N+LQQ ++ PPP +S + + EAP
Sbjct: 185 PQLHQQSLIRPPHGLPMPNSLQQPLQYPNFNTPPPPTGSSSLQGSS------LPEAP--- 235
Query: 1391 SSHVYPQSPKQGEMFMQPCQIPGPSNVTQRGYVASTPQHDASASNFQKQFVSVSPNFSIN 1450
S ++P S + PG VT + ST Q S S + ++P N
Sbjct: 236 -SSLFPFSTSSQMLAPSSLPFPGLPPVTLSSSLQSTLQSAPSPSLASE----MAPPLLSN 290
Query: 1451 QQPNQATPVLNSSQIAGPSNQDMYSVSKRSIKLKPGQLGTPEDVLVTIQTGPKTESQVPP 1510
+ P A P L P + ++ S S + + G P ++ TGP + Q P
Sbjct: 291 KAPITAPPTL-------PQDTNLLSFSLSTTRATEASTGLPLSNKPSVVTGPISPPQTTP 343
Query: 1511 ET 1512
T
Sbjct: 344 LT 345
>At1g17440.2 68414.m02133 transcription initiation factor IID (TFIID)
subunit A family protein similar to SP|Q16514
Transcription initiation factor TFIID 20/15 kDa subunits
(TAFII-20/TAFII-15) {Homo sapiens}; contains Pfam profile
PF03847: Transcription initiation factor TFIID subunit A
Length = 683
Score = 31.5 bits (68), Expect = 4.8
Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 13/154 (8%)
Query: 1225 QNMAYCSSYADANQDQSSYMIVG--GDRHDSPYQQNIPYVNERREVTPEQWFTLEETKAP 1282
QN+ SS A N S G G +S QQ ++ + +T F L+ ++
Sbjct: 336 QNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQ--WLKQMSGITSPNSFRLQPSQRQ 393
Query: 1283 PGLRDYQSIQATSQFPSCCQQTASGAGQQELNQ----QSQVQTTPSSNIQRSH---QLPP 1335
L Q Q Q++ QQ+++Q Q Q S + +SH QL
Sbjct: 394 ALLLQQQQQQQQQLSSPQLHQSSMSLNQQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQ 453
Query: 1336 HYQQMSQVVPQHTQHNTLQQS--AIDYLQPPPQL 1367
QQ+ Q Q Q QQ I+ QP P++
Sbjct: 454 MQQQLQQQPQQQMQQQQQQQQQMQINQQQPSPRM 487
Score = 31.5 bits (68), Expect = 4.8
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 1313 LNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQQSAIDYLQPPPQLNNSQ 1371
L QQ Q Q SS + + QQ+SQ++ Q Q + L QS ++ QL Q
Sbjct: 397 LQQQQQQQQQLSSPQLHQSSMSLNQQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQMQ 455
>At1g17440.1 68414.m02132 transcription initiation factor IID (TFIID)
subunit A family protein similar to SP|Q16514
Transcription initiation factor TFIID 20/15 kDa subunits
(TAFII-20/TAFII-15) {Homo sapiens}; contains Pfam profile
PF03847: Transcription initiation factor TFIID subunit A
Length = 683
Score = 31.5 bits (68), Expect = 4.8
Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 13/154 (8%)
Query: 1225 QNMAYCSSYADANQDQSSYMIVG--GDRHDSPYQQNIPYVNERREVTPEQWFTLEETKAP 1282
QN+ SS A N S G G +S QQ ++ + +T F L+ ++
Sbjct: 336 QNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQ--WLKQMSGITSPNSFRLQPSQRQ 393
Query: 1283 PGLRDYQSIQATSQFPSCCQQTASGAGQQELNQ----QSQVQTTPSSNIQRSH---QLPP 1335
L Q Q Q++ QQ+++Q Q Q S + +SH QL
Sbjct: 394 ALLLQQQQQQQQQLSSPQLHQSSMSLNQQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQ 453
Query: 1336 HYQQMSQVVPQHTQHNTLQQS--AIDYLQPPPQL 1367
QQ+ Q Q Q QQ I+ QP P++
Sbjct: 454 MQQQLQQQPQQQMQQQQQQQQQMQINQQQPSPRM 487
Score = 31.5 bits (68), Expect = 4.8
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 1313 LNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQQSAIDYLQPPPQLNNSQ 1371
L QQ Q Q SS + + QQ+SQ++ Q Q + L QS ++ QL Q
Sbjct: 397 LQQQQQQQQQLSSPQLHQSSMSLNQQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQMQ 455
>At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing
protein
Length = 987
Score = 31.1 bits (67), Expect = 6.4
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 22/260 (8%)
Query: 70 THSPDKHGSLSRSPSRQPQFGTSSWRISRSSTAHQPKYRDDEPTRDGPGGHDRSCNVRRV 129
+ SP K + SRS S+ P S+R R S + P +R P H +R
Sbjct: 507 SRSPSKSPARSRSKSKSP----ISYRRRRRSPTYSPPFRR-------PRSHRSRSPLRYQ 555
Query: 130 ESLKGEKCRRAPKSATVTSETQASVQTMSREVETAPR---MEPLKRNVAIPLSPQASRNP 186
E RR+ + + SE++ ++ ++ R + P KR S + SR
Sbjct: 556 RRSTYEGRRRSYRDSRDISESRRYGRSDEHHSSSSRRSRSVSPKKRKSGQEDS-ELSRLR 614
Query: 187 QDATRCDAVVSGLQQNVTKQTLKKSRRTPTGVHQQQALNTVFRKCKSLGDVAVKRDIYKD 246
+D++ S + + + K+ + TP + + + +S+ D A +D +D
Sbjct: 615 RDSSSRGEKKSSRAGSRSPRRRKEVKSTPRDDEENKVKRRTRSRSRSVEDSADIKDKSRD 674
Query: 247 ILDLLKEIVAYSKFGDILFKDSKKQSNFSKSRRHDMDKHRMIRRTASFNLDSLSLDNVLT 306
+ LK S+ +D K + S++ KHR R+ S D+ S +NV
Sbjct: 675 --EELKHHKKRSRSRSR--EDRSKTRDTSRNSDEAKQKHRQRSRSRSLENDNGSHENVDV 730
Query: 307 VES---RTNNCSKKSPAIDK 323
+ + + ++S ++D+
Sbjct: 731 AQDNDLNSRHSKRRSKSLDE 750
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 31.1 bits (67), Expect = 6.4
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 9/124 (7%)
Query: 69 DTHSPDK-HGSLSRSPSRQPQFGTSSWRISRSSTAHQPKYRDDEPTRDGPGGHDRSCNVR 127
D S +K G S S P S + R H+ ++D R + R
Sbjct: 750 DLKSAEKVKGVESNKKSTDPHVKKDSRDVERP---HRTNSKEDRGKRKEKEKEEERSRHR 806
Query: 128 RVESLKGEKCRRAPKSATVTSETQASVQTMSREVETAPRMEPLKRNVAIPLSPQASRNPQ 187
R E+ +K RR+P S + +++ ++ R V +P KR+ SP + +
Sbjct: 807 RAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSPVRSRRKRS-----SPSSDESSD 861
Query: 188 DATR 191
D+ R
Sbjct: 862 DSKR 865
>At1g08910.1 68414.m00991 zinc finger (MIZ type) family protein
similar to putative variable cytadhesin protein
(GI:7677312) {Mycoplasma gallisepticum}; contains Pfam
PF02891: MIZ zinc finger domain
Length = 842
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 9/107 (8%)
Query: 606 ADVLSQTIRSIPVPMLTLSQNPGNLKSSLPPCCTAQPTSHAGPSLSTPKNYTPAL----S 661
+ L T P P L+ N N +S+P ++Q SL + T L +
Sbjct: 473 SQALPMTFSPTPSPQDILATNAANFGTSMPAAQSSQFQGSHVTSLGNCEGRTSDLMARWN 532
Query: 662 HSFGTDQSSNYAPAP----SYPAQNRNPPKYRRQSSPTAFASGPMIH 704
H +G Q + + PAP Y QN++P +++ P+ A H
Sbjct: 533 HIYGRVQ-TQFPPAPLSHHHYSMQNQSPSPAQQRPVPSYIAHPQTFH 578
>At5g65630.1 68418.m08256 DNA-binding bromodomain-containing protein
similar to 5.9 kb fsh membrane protein [Drosophila
melanogaster] GI:157455; contains Pfam profile PF00439:
Bromodomain
Length = 590
Score = 30.7 bits (66), Expect = 8.4
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 1461 NSSQIAGP-SNQDMYSVSKRSIKLKPGQLGTPEDVLVTIQTGPKTESQVPPET-PDIPEA 1518
N +A P + S++K+ +KP Q P ++ + + PP P++P+
Sbjct: 304 NPPMVANPRKGTEQISIAKKLDSVKPPQPTLPPQLVEPSRVQSPSPPPPPPVIQPELPQP 363
Query: 1519 DDIPEEVEQAVNDQAYITPQSKEIQPKYP-PLKKKPTR 1555
P ++E V ++ SK + K P P K P +
Sbjct: 364 QPPPPQLEIEVEAPPDVSEVSKGRKGKLPKPKAKDPNK 401
>At5g01400.1 68418.m00053 expressed protein contains low similarity to
symplekin SP:Q92797 from [Homo sapiens]
Length = 1467
Score = 30.7 bits (66), Expect = 8.4
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 1287 DYQSIQATSQFPSCCQQTASGAGQQELNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQ 1346
D Q Q TSQ + QT+ QQ+ ++ Q + ++ SH H Q+ SQVV
Sbjct: 1245 DSQGTQ-TSQVQANETQTSQEQQQQQASEPQQTSQSQQVSVPLSHSQVDH-QEPSQVVAS 1302
Query: 1347 HTQHNTL--QQSAIDYLQPPP 1365
+Q + + QSA+ Q P
Sbjct: 1303 QSQSSPIGTVQSAMSQSQNSP 1323
>At3g10070.1 68416.m01207 transcription initiation factor IID
(TFIID) subunit A family protein similar to hypothetical
protein GB:CAB10099 [Schizosaccharomyces pombe];
contains Pfam profile PF03847: Transcription initiation
factor TFIID subunit A
Length = 539
Score = 30.7 bits (66), Expect = 8.4
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 632 SSLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQSS-NYAPAPSYPA--QNRNPPKY 688
+S PP QP S + PS T TP+ + S + SS +PAP P+ N NPP+Y
Sbjct: 10 ASQPPETPPQP-SDSKPSTLTQIQPTPSTNPSPSSVVSSIPSSPAPQSPSLNPNPNPPQY 68
Query: 689 RR 690
R
Sbjct: 69 TR 70
>At2g39340.1 68415.m04829 SAC3/GANP family protein contains Pfam
profile: PF03399 SAC3/GANP family
Length = 1006
Score = 30.7 bits (66), Expect = 8.4
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 611 QTIRSIPVPMLTLSQNPGNLKSSLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQSS 670
Q +S P P+ QN G + P P S+AG + Y PA + G QS+
Sbjct: 132 QPSQSYPQPVGAY-QNTG---APQPLSSFQNPGSYAGTPSYSGTYYNPADYQTAGGYQST 187
Query: 671 NY--APAPSYPAQN-RNPPKYRRQSSPTAFASGP 701
NY A SYP+ N N Q + T + S P
Sbjct: 188 NYNNQTAGSYPSTNYSNQTPASNQGNYTDYTSNP 221
>At2g30720.1 68415.m03747 thioesterase family protein similar to
SP|Q9R0X4 48 kDa acyl-CoA thioester hydrolase,
mitochondrial precursor (EC 3.1.2.-) {Mus musculus};
contains Pfam profile PF03061: thioesterase family
protein
Length = 455
Score = 30.7 bits (66), Expect = 8.4
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 762 SSLSPKGLGGNVIQNPVNNNLWEGRRMLGNFPASGESWPSNYNQTFASRPRSA 814
S P L + +PV N LWE RR + P ++ S SR R++
Sbjct: 55 SMRKPISLWPGMYHSPVTNALWEARRNMFEIPTGDDASQSKLTAKSPSRSRTS 107
>At2g30590.1 68415.m03727 WRKY family transcription factor
Length = 380
Score = 30.7 bits (66), Expect = 8.4
Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 8/148 (5%)
Query: 1274 FTLEETKAPPGLRDYQSIQATSQFPSCCQQTASGAGQQELNQQSQVQTTPSSNIQRSHQL 1333
F+L P L+ Q S +P+ QQ+ QQ Q Q Q +L
Sbjct: 124 FSLNSNAKAPLLQLNQQTMPPSNYPTLFPVQQQQQQQQQQQQQEQQQQQQQQQQQFHERL 183
Query: 1334 PPHYQQMSQVVPQHTQHNTLQQS------AIDYLQPPPQLNNSQIYXXXXXXXXXVLEAP 1387
H+ Q + +H L++ + D P +++++ + V
Sbjct: 184 QAHHLHQQQQLQKHQAELMLRKCNGGISLSFDNSSCTPTMSSTRSFVSSLSIDGSVANIE 243
Query: 1388 GTQSSHV-YPQSPKQGEMF-MQPCQIPG 1413
G S H P S Q + + C + G
Sbjct: 244 GKNSFHFGVPSSTDQNSLHSKRKCPLKG 271
>At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to
GTP-binding protein ERG SP:O82653 from [Arabidopsis
thaliana]
Length = 437
Score = 30.7 bits (66), Expect = 8.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 1425 STPQHDASASNFQKQFVSVSPNF----SINQQPNQATPVLNSSQ 1464
+TP++ A NF ++F S PN SIN+ + + V +SSQ
Sbjct: 20 TTPRNPHQAQNFLRRFYSAQPNLDEPTSINEDGSSSDSVFDSSQ 63
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.130 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,215,230
Number of Sequences: 28952
Number of extensions: 1673137
Number of successful extensions: 4614
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 4484
Number of HSP's gapped (non-prelim): 164
length of query: 1624
length of database: 12,070,560
effective HSP length: 91
effective length of query: 1533
effective length of database: 9,435,928
effective search space: 14465277624
effective search space used: 14465277624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 66 (30.7 bits)
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