Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001346-TA|BGIBMGA001346-PA|undefined
(1624 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 39 0.007
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 35 0.081
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.33
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 33 0.43
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 33 0.43
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 32 0.57
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 31 1.0
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 31 1.3
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 31 1.8
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 31 1.8
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 30 2.3
SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb... 30 2.3
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 30 2.3
SPBC18H10.09 |||zinc finger protein, zf-CHY type|Schizosaccharom... 30 3.1
SPBC31F10.04c |srb4|med17|mediator complex subunit Srb4|Schizosa... 30 3.1
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 30 3.1
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 30 3.1
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 30 3.1
SPAC328.07c |||heavy metal ion homeostasis protein |Schizosaccha... 30 3.1
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 30 3.1
SPBC16C6.12c |||Las1-like protein|Schizosaccharomyces pombe|chr ... 30 3.1
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 30 3.1
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 29 4.0
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 29 5.3
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac... 29 5.3
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 29 5.3
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 5.3
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 29 7.1
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 29 7.1
SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces p... 29 7.1
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 29 7.1
SPBC25B2.06c |btb2||BTB/POZ domain protein Btb2|Schizosaccharomy... 29 7.1
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 7.1
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 29 7.1
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 29 7.1
SPBC1709.12 |rid1||GTPase binding protein Rid1|Schizosaccharomyc... 29 7.1
SPCC622.10c |||exocyst complex subunit Sec5 |Schizosaccharomyces... 28 9.3
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 28 9.3
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 28 9.3
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 38.7 bits (86), Expect = 0.007
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 11/204 (5%)
Query: 267 DSKKQSNFSKSRRHDMDKHRMIRRTASF-NLDSLSLDNVLTVESRTNNCS--KKSPAIDK 323
+SK +N + + R+ + T +L S+S + E ++ K + +
Sbjct: 652 NSKLNTNLIEQTSYQRSLIRLEQLTNELESLKSISRNKEKKFEEAISSLQLEKSNIQLQL 711
Query: 324 TELLTQSLMELLHLNDNNMKRKTFRLIDYMFDNLNDGGPSLNELASFCLNRLQNLFT-LA 382
T L ++ + L LND K+ L + D L++ SL E + +QN+ + L+
Sbjct: 712 TSLTSERSLALEKLND---LEKSLVLSERSKDELDESYKSLQEQLASKKIEVQNVSSQLS 768
Query: 383 TLNKDTTETKEIISEVIKKSLIKFTQKNKLKLKTANLEDMTSKLINICKNNNVDTKNKVE 442
N ++ I+ + ++L+ + K+KLK +NLE S L + +N K ++E
Sbjct: 769 ICNSQLEQSNHIVDNLKSENLLLTSVKDKLKADLSNLESKLSSL----QQDNFHMKAQIE 824
Query: 443 IEIMALMMKNDFTNNQAAEYTDQL 466
D N++ E ++ L
Sbjct: 825 SSNQEYTATVDSMNSRILELSNDL 848
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 35.1 bits (77), Expect = 0.081
Identities = 29/149 (19%), Positives = 69/149 (46%), Gaps = 5/149 (3%)
Query: 977 QLLDKANNMIAQAARNSSSYKQQLVHSITNHIPLMTIDMQAEDPERLYDDMLKMAIADNF 1036
++L+K NN I A S S ++Q + P+++ + +A++ ++ K +
Sbjct: 56 EILEKENNAINSEAEKSVSEEEQDEPLVEGESPIVSTNKKAKNKKKKKKQQKKKKVTGKR 115
Query: 1037 ILFTKYNEEDKFQANMFKKKVANRVNELVENIKNTHGFALYNLDFDRIKDEVMNALTRVP 1096
L + ++ +K + K + + ++E+ K L + D++ + V
Sbjct: 116 DLDNQSSDNEKLEGLESSKNIDDDIDEIE---KAAAELKLKYREQDQV-EHVAGVEESAT 171
Query: 1097 LPTDDEMKDEVDEVLLGMDIDHWFSDLPL 1125
+P D E+ +++++ LLG++I DL +
Sbjct: 172 IPLDKELDEKLNK-LLGVNISMLNPDLEI 199
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.33
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 1450 NQQPNQATPVLNSSQIAGPSNQDMYSVSKRSIKLKPGQLGTPEDVLVTIQTGPKTESQVP 1509
+Q N P ++ Q+ P+ M++V+ K PG + T + P SQ+P
Sbjct: 1431 SQPTNPGAPSNHAPQVVPPA--PMHAVAPVQPKA-PGMV-TNAPAPSSAPAPPAPVSQLP 1486
Query: 1510 PETPDIPEADDIPEEVEQAVNDQAYITPQSKEIQPKYPPLKKKPT 1554
P P++P IP +Q + A T S + P P+
Sbjct: 1487 PAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPS 1531
Score = 28.7 bits (61), Expect = 7.1
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Query: 631 KSSLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQSSNYAPAPSYPAQNRNP-PKYR 689
++S P +QPT+ PS P+ PA H+ Q + PA + P P
Sbjct: 1422 ETSTMPLKASQPTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAP 1481
Query: 690 RQSSPTAFASGPMIHNAGSVGRMP 713
P A + P+ SV + P
Sbjct: 1482 VSQLPPAVPNVPVPSMIPSVAQQP 1505
Score = 28.3 bits (60), Expect = 9.3
Identities = 57/246 (23%), Positives = 84/246 (34%), Gaps = 26/246 (10%)
Query: 1319 VQTTPSSNIQRS---HQLPPHYQQMSQVVPQHTQHNTLQQSAIDYLQPPPQLNN-SQIYX 1374
V T+P I S H PP Q M+ +P H N + SA + +++ S +
Sbjct: 1361 VPTSPKPQIPDSSNVHAPPPPVQPMN-AMPSHNAVNA-RPSAPERRDSFGSVSSGSNVSS 1418
Query: 1375 XXXXXXXXVLEA-----PGTQSSHVYPQSPKQGEMFMQPCQIPGPSNVTQRGYVASTPQH 1429
L+A PG S+H P + P Q P VT +S P
Sbjct: 1419 IEDETSTMPLKASQPTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAP 1478
Query: 1430 DASASNFQKQFVSVS-PNF--SINQQ-PNQATPVLNSSQIAGPSNQDMYSVSKRSIKLKP 1485
A S +V P+ S+ QQ P+ P S PS V P
Sbjct: 1479 PAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVP------SP 1532
Query: 1486 GQLGTPEDVLVTIQTGPKTESQVPPETPDIPEADDIPEEVEQAVNDQAYIT--PQSKEIQ 1543
+ + P S +P P+ P + QA+N+ A T S+
Sbjct: 1533 APPAPQHPSAAALSSAPADNSMPHRSSPYAPQE---PVQKPQAINNIAPATNLGTSQSFS 1589
Query: 1544 PKYPPL 1549
P+ P+
Sbjct: 1590 PRMGPV 1595
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 32.7 bits (71), Expect = 0.43
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 392 KEIISEVIKKSLIKFTQKNKLKLKTANLEDMTSKLINICKNNNVDTKNKVEIEIMALMMK 451
KE++ V K L+ Q KL++ N++ +L + K+N ++K E+E + L +
Sbjct: 468 KELMDRVQNKDLLCQEQARKLEVLDLNVKSSREQLQYVSKSNQ---EHKKEVEALQLQLV 524
Query: 452 NDFTNNQAAEYTDQLIK 468
N T ++ + ++ +K
Sbjct: 525 NSSTELESVKSENEKLK 541
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 32.7 bits (71), Expect = 0.43
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 1444 SPNFSINQQPNQATPVLNSSQIAGPSNQDMYSVS 1477
+P+ S +Q N + P L+S+ + G SNQD YS+S
Sbjct: 428 APSNSNSQYMNTSMPTLDSTNMYGQSNQDPYSMS 461
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 32.3 bits (70), Expect = 0.57
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 275 SKSRRHDMDKHRMIRRTASFNLDSLSLD-NVLTVESRTNNCSKKSPAIDKTELLTQSL-M 332
S S + ++DK + +R+ S +L+ LD N R + KKS +DK + L + +
Sbjct: 357 SNSNKKNLDKLKKMRKLCSRSLEPYELDSNTQRKRKRYEDSLKKSKTLDKVDSLNRKMAK 416
Query: 333 ELLHLNDNNMKR 344
EL N +++
Sbjct: 417 ELDRKNSKELQK 428
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 31.5 bits (68), Expect = 1.0
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1086 DEVMNALTRVPLPTDDEMKDEVDEVLLGMDIDHWFSDLPLVQSEDNYECVQQ-RRLRDLL 1144
+ + + + R LPT+ M +V E L+ + +D V++ N + ++ +RD +
Sbjct: 545 ESLESGVFRSDLPTNFNMDPKVYEELI-LQLDKALDFSLTVENNVNVDEIENYEEVRDSI 603
Query: 1145 TKKIHDIEKRPNTSEE 1160
KK+ D+ RP SE+
Sbjct: 604 LKKLSDLRDRPKRSEK 619
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 70 THSPDKHGSLSRSPSRQPQFGTSSWRISRSSTAHQP----KYRDDEPTRDGPGGHDRSCN 125
+ SP H S+ SR P R SRSS + P ++R D+ +R P S +
Sbjct: 128 SRSPSPHSSVDSHQSRSPVRSRDRDRSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRS 187
Query: 126 VRRVESLKGEKCR 138
RR E R
Sbjct: 188 RRRYEERSSRSSR 200
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 625 QNPGNLKSSLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQSSNYA-PAPSYPAQNR 683
+NP ++ S PCC + P+S +LS + ++ GT Y P SY A N
Sbjct: 300 ENPLSISSRPSPCCPSTPSS--AVTLSNGFDSQSNAYNNSGTGPPMLYKFPQRSYTAPNT 357
Query: 684 NPPKYRRQSSPTA 696
+ RR SS T+
Sbjct: 358 SFNSQRRMSSITS 370
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 30.7 bits (66), Expect = 1.8
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Query: 624 SQNPGNLKSSLPPCCTAQ--PTSHAGPSLSTPKNYTPALSHSFGTDQSSNYAP-APSYPA 680
SQNP S+LP P ++ +S N P L S+ Y P A S PA
Sbjct: 177 SQNPAISTSNLPSTTPLYIPPVNYGANQVSQQPN--PQLP-----GVSNYYNPSATSKPA 229
Query: 681 QNRNPPKYRRQSSPTAFASGPMIHNAGSVGR 711
N PP+ +++P+A S NAGS+ +
Sbjct: 230 VNVQPPRIPTKATPSAEPSMTASANAGSISQ 260
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 617 PVPMLTLSQNPGNLKSSLPPCCTAQPTSHAGPS 649
P P LT+S P + SS+P C+ +GPS
Sbjct: 296 PSPCLTVSSGPLSTASSIPSNCSCPSVKSSGPS 328
>SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1066
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 5/86 (5%)
Query: 626 NPGNLKSSLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQSSNYAPA-----PSYPA 680
N + S+ P QP + G L +T ++S S + +S P+ PS
Sbjct: 96 NQATIPSNSPAVSNMQPPTQGGQPLYPTNFFTTSVSASSDSFPNSPTVPSKFSLNPSVAT 155
Query: 681 QNRNPPKYRRQSSPTAFASGPMIHNA 706
P+ +S A S P HNA
Sbjct: 156 STNISPRRHAKSHSVASVSSPNSHNA 181
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 730
Score = 30.3 bits (65), Expect = 2.3
Identities = 39/145 (26%), Positives = 56/145 (38%), Gaps = 16/145 (11%)
Query: 1412 PGPSNVTQRGYVASTPQHDASASNFQKQFVSV--SPNFSINQQPNQATPVLNSSQIAGPS 1469
P PSN Q S ++ SA K V + N S N +P + V N +
Sbjct: 432 PLPSNTQQ-----SESTYEYSARQLPKPPVQAWQNENLSSNNKPQEYVGVENDYNFSNNP 486
Query: 1470 NQDMYSVSKR-SIKLKPGQLGTPEDVLVTIQTGP-----KTESQVPPE-TPDIPEADDIP 1522
M S S+ KP + TPE+ + P + SQ+ P +P+ P
Sbjct: 487 PTAMSEQSFHPSVSQKP--MDTPENGSNSFAASPYLQPYNSASQLAPSYVGSLPQYHGNP 544
Query: 1523 EEVEQAVNDQAYITPQSKEIQPKYP 1547
VEQA+ D T + +I P P
Sbjct: 545 SFVEQALQDLVQPTDSASQIFPLNP 569
>SPBC18H10.09 |||zinc finger protein, zf-CHY
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 29.9 bits (64), Expect = 3.1
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 8/128 (6%)
Query: 147 TSETQASVQTM-SREVETAPRMEPLKRNVAIPLSPQASRNPQDATRCDAVVSGLQQNVTK 205
T E + VQ + S++ ET +EPL + PLS + N T D V Q + K
Sbjct: 39 TKERELMVQQVDSKKPETPTDLEPLANKLEGPLSERVHLN----TTLDYEVLRGQNHCQK 94
Query: 206 QTLKKSRRTPTGVHQQQALNTVFRKCKSLGDVAVKRDIYKDILDLLKEIVAYSKFGDILF 265
Q +++ T +G Q + S G K D D+ ++ + AYS DI
Sbjct: 95 QNTTQTKTTISGSEQLFNDEKPKKIIYSKGGNDGKED---DLQNVNEPQDAYSNDHDIQS 151
Query: 266 KDSKKQSN 273
KD++ N
Sbjct: 152 KDTELLGN 159
>SPBC31F10.04c |srb4|med17|mediator complex subunit
Srb4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 29.9 bits (64), Expect = 3.1
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 363 SLNELASFCLNRLQNLFTLATL----NKDTTETKEIISEVIKKSLIKFTQKNKLKLKTAN 418
S+ + +S + +N+ ATL N + TE + + S+ KK LI+ + + A
Sbjct: 64 SIKDESSAKSSETENVLEFATLDSKRNVNDTEVESMDSQAYKKELIEQIMIAQTECSLAL 123
Query: 419 LEDMTSKLINICKNNNVDT 437
DMTS L++ K N+++T
Sbjct: 124 --DMTSLLLSKFKENSIET 140
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 29.9 bits (64), Expect = 3.1
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 9/128 (7%)
Query: 1310 QQELNQQSQVQTTPSS-NIQRSHQLPPHYQQMSQVVPQHTQHNTLQQSAIDYLQPPPQLN 1368
Q LN QS+ P++ +Q+ QL HY+Q+ V Q QH QQ PQ+
Sbjct: 235 QAMLNNQSRETFPPTAAQLQQLKQL--HYRQLQSVQQQQKQH---QQKKTPQSGSTPQMQ 289
Query: 1369 NSQIYXXXXXXXXXVLEAPGTQSSHVYPQSPKQGEMFMQPCQIPGPSNVTQRGYV-ASTP 1427
N+ + P + + P SPK E Q T G V S P
Sbjct: 290 NTTSQPTTHDTHPPKQQGPISDFRSI-PSSPKT-EGAPSNAQFRPSLPATPNGSVPQSNP 347
Query: 1428 QHDASASN 1435
+D + N
Sbjct: 348 LYDTTGLN 355
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 29.9 bits (64), Expect = 3.1
Identities = 32/123 (26%), Positives = 46/123 (37%), Gaps = 4/123 (3%)
Query: 1306 SGAGQQELNQQSQVQTTPSSNIQRSHQLPPHYQQM-SQVVPQHTQHNTLQQSAIDYLQPP 1364
SG+ Q L S + TPSS +R +PP+ + S+VV + Q+N Y Q
Sbjct: 315 SGSNQASLRSTSTIHYTPSS--KRISVIPPNTSNIGSRVVSRSGQNNNQPAQPGQYNQQS 372
Query: 1365 PQLNNSQIYXXXXXXXXXVLEAPGTQSSHVYPQSPKQGEMFMQPCQIPGPSNVTQRGYVA 1424
+ + Q P + + P SP Q P P TQ Y
Sbjct: 373 QPVQSYQSGQSTQHFQPVQPIQPVQSTQYYQPSSPVQPVQNGVPAPPMQPVQSTQY-YQP 431
Query: 1425 STP 1427
S+P
Sbjct: 432 SSP 434
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1052
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 1491 PEDVLVTIQTGPKTESQVPPETPDIPEADDIPEEVEQAVNDQAYITPQSKEIQP 1544
P D + +QTG V P+T D P ++EQ +N+ + + K+ QP
Sbjct: 704 PVDCSLPVQTGADV---VVPDTTDEEVITSEPVKLEQPINENSNVEEAEKDYQP 754
>SPAC328.07c |||heavy metal ion homeostasis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 277
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 1/89 (1%)
Query: 1252 DSPYQQNIP-YVNERREVTPEQWFTLEETKAPPGLRDYQSIQATSQFPSCCQQTASGAGQ 1310
D Y + P Y + R + E+ F + PG + + PS A G
Sbjct: 38 DVEYSETAPLYSSARASIEGEEAFYQHLSTPDPGNDSGHVRSSNDRIPSTSSNHADGHHV 97
Query: 1311 QELNQQSQVQTTPSSNIQRSHQLPPHYQQ 1339
+ + T SN + + PP Y+Q
Sbjct: 98 DSVFSNLSAKPTVESNTEELEEEPPSYEQ 126
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 29.9 bits (64), Expect = 3.1
Identities = 29/153 (18%), Positives = 65/153 (42%), Gaps = 2/153 (1%)
Query: 417 ANLEDMTSKLINICKNNNVDTKNKVEIEIMALMMKNDFTNNQAAEYTDQLIKQTCEKVFE 476
+N+E + LI KN + +I L +N+ ++ E D L+K+ E
Sbjct: 283 SNIEQKANSLIMEYKNELQSAEEHFSHKIKELTSENELKISRLQEEKDSLLKKVQEGASL 342
Query: 477 GPPPMYPRNYVVFQNTQNSIQGLNESDNFSVAPINERDIDI-NLKFYKNQLVQAVEQWLT 535
+ ++ + + Q++IQ L E +N I + ++ + K L +++Q
Sbjct: 343 AMQRVQNKHDLEKKRLQSAIQPLQEENNSLKQQIEQLQRELASETVVKENLKSSLDQQSA 402
Query: 536 SVTGTGLSEIFRQVAVNDLTDDIID-RHKYLEM 567
+V + + + L +D+ ++K +E+
Sbjct: 403 NVQKLESTNRALESTIKTLEEDVYTMKNKIIEL 435
>SPBC16C6.12c |||Las1-like protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 1087 EVMNALTRVPLPTDDEMKDEVDEVLLGMDIDHWFSDLPLVQSEDNYECVQQRRLRDL-LT 1145
E+ +A+T LP+ ++ L + DH+++ +SED Y+ + L +
Sbjct: 115 ELRHAITHEELPSLPVLRQAAQRALSWL-YDHYWNPAATAESEDTYDYTETNELHKFEIK 173
Query: 1146 KKIHDIEKR 1154
+K+ D+ K+
Sbjct: 174 RKVKDLLKQ 182
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 29.9 bits (64), Expect = 3.1
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 5/105 (4%)
Query: 613 IRSIPVPMLTLSQNPGNLKSSLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQSSNY 672
++S P S +P + P A + S+S P++Y P L + +
Sbjct: 50 LQSFVPPQPPSSSSPSTTGTVAVPINGANAVYPSTNSVSLPQSYDPWLDANGVVPLPHDV 109
Query: 673 APAPSYPAQNRNPPKYR---RQSSPTAFASGPMIHNAGSVGRMPI 714
A PSY Q +P Y SP + P +HN V P+
Sbjct: 110 ASHPSYMVQ--SPTSYHACSNNQSPFPHSHHPPLHNPLPVSCQPV 152
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 29.5 bits (63), Expect = 4.0
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 590 IHELVGDDKISNALDHADVLSQTIRSIPVPMLTLSQNPGNLKSSLPPCCTAQPTSHAGPS 649
+H + + K S L+ P+ + L+ +L S P P H S
Sbjct: 232 LHPFMQESKTSPFATRRPSLNTDHHGRPILLSPLNYQNSSLNPSTPSPFGGSPVMHPPVS 291
Query: 650 LSTPKNYTPALSHSFGTDQSSNYAPAPSYPAQNRNPPKYRRQSSPTAFASGPMIHNAGSV 709
+P+ TPA+ SS+ AP++ N NP +R S + S P NA ++
Sbjct: 292 NLSPR--TPAVP------MSSDGHLAPAFDFLNENPIWSKRFSISSIKYSAPSTSNASNI 343
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 387 DTTETKEIISEVIKKSLIKFTQKNKLKLKTANLEDMTSKLINICKNNNVDTKNKVE--IE 444
D +ETK ++ K + + K+++ L TA E KL+ + K K+ +
Sbjct: 561 DISETKNLVGHDTKTNRSSLSSKHEVDLFTAENEAAREKLVEQLCSLQAQRKQKINEILN 620
Query: 445 IMALMMKNDFTNNQA 459
++++ M N +Q+
Sbjct: 621 LLSMGMYNTINTDQS 635
>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
complex subunit, Fip1 homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 624 SQNPGNLKSSLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQS-SNYAPAPSYPAQN 682
S++P N P ++ +HA P+ + +Y S ++ + SN+ + +YP+ +
Sbjct: 263 SESPANS----PNITSSAGMTHAQPTHNPTSSYGNGASTNYNASRPPSNHPHSSNYPSSS 318
Query: 683 RNPPKYRRQSSPTAFASG 700
R P R S+ ++ SG
Sbjct: 319 RRKPSPDRYSNYSSRGSG 336
>SPCC1183.07 |||U3 snoRNP-associated protein
Rrp5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1690
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/44 (31%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 378 LFTLATLNKDTTETKEIISEVIKKSLIKFTQKNKLKLKTANLED 421
L + L KDT+ K++IS +KKSL++ ++N++ + +L++
Sbjct: 719 LAEVLVLRKDTS--KKLISLSLKKSLVEAAKENRMPINITDLKE 760
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.1 bits (62), Expect = 5.3
Identities = 41/175 (23%), Positives = 65/175 (37%), Gaps = 18/175 (10%)
Query: 1383 VLEAPGTQSSHVYPQSPKQGEMFMQPCQ--IPGPSNVTQRGYVASTPQHDASASNFQKQF 1440
V EAP P +P+ +P +P +V QR V P+ + S Q
Sbjct: 523 VPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPE---ALSVPQPPV 579
Query: 1441 VSVSPNFSINQQPNQATPVLNSSQIAGPSNQDMYSVSKRSIKLKPGQLGTPEDVLVTIQT 1500
V+P QP A V + + P + + S+ +P PE V
Sbjct: 580 APVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPV-APEVPSVPQRPAVPVVPEAPSV---- 634
Query: 1501 GPKTESQVPPETPDIPEADDIPEEVEQAVNDQAYITPQ--SKEIQPKYPPLKKKP 1553
P+ PP P +PE +P+ V +A PQ + + P+ P + + P
Sbjct: 635 -PQ-----PPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPP 683
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 28.7 bits (61), Expect = 7.1
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Query: 125 NVRRVESLKGEKCRRAPKSATVTSETQASVQTMSREVETAP----RMEPLKRNVAIPLSP 180
NV S+K R T++ ++ VQ E P + + K+ ++ P
Sbjct: 218 NVANFTSIKDSGGRDNLYIQTISKPRRSYVQNNKSEQTIKPSKQNKQKEEKKTISQGNKP 277
Query: 181 QASRNPQDATRCDAVVSGLQQNVTKQTLKKSRRTPTGVHQQQALNTV 227
SR+ D +S L +++ + K +RTP Q+ ++N+V
Sbjct: 278 N-SRDEDSELSIDVPLSMLNRSLANNSQKNKKRTPNKPLQESSINSV 323
>SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 766
Score = 28.7 bits (61), Expect = 7.1
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 1313 LNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVVPQHTQHNTLQQSAIDYLQPPPQLNNSQI 1372
L Q+ +Q PS ++H LP H Q + VP H+++ A PP+ +
Sbjct: 256 LGSQTNLQLAPSFAAPQAHPLPSHLSQSN--VPPQLSHSSVPSPA------PPRSVSQPT 307
Query: 1373 YXXXXXXXXXVLEAPGTQS 1391
Y PGT S
Sbjct: 308 YFSQPMPQFSSSFVPGTSS 326
>SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 472
Score = 28.7 bits (61), Expect = 7.1
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 1490 TPEDVLVTIQTGPKTESQVPPETPDIPEA--DDIPEEVEQ----AVNDQAYITPQSKEIQ 1543
+P+D L+++Q ES T ++P+A D P E+ ++ +++ P+SKE +
Sbjct: 89 SPQDQLLSLQLNNVQESVFQQSTFNLPDALLDPGPASKEKQAVLSIGRPSWLPPKSKEEE 148
Query: 1544 PK----YPPLKKKPTRVIDRQK 1561
K + +KK R DRQK
Sbjct: 149 KKHMREFEQIKKSAMR-YDRQK 169
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 28.7 bits (61), Expect = 7.1
Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 3/123 (2%)
Query: 736 RMSGSSNYASGTFVQNQLTDLSYNQISSLSPKGLGGNVIQNPVNNNLWEGRRMLGNFPAS 795
R G+ + +S +Q +S N I + LG N NP + N + L N PA
Sbjct: 213 RNPGNISSSSAPLASDQSPTVSSNHIHASGNLALGSNSGLNPRSPNSFSS--PLDN-PAL 269
Query: 796 GESWPSNYNQTFASRPRSASFNXXXXXXXXXXXXXMSGPATFASGPMNLYPLPDQMQQNM 855
+N N + + S+S N + P GP + +P + N
Sbjct: 270 HTVDSTNVNGSLSPLSNSSSINQVHQNETHGSTISVPNPNLSQMGPSHSSSVPSNLSPNP 329
Query: 856 YPN 858
N
Sbjct: 330 AQN 332
>SPBC25B2.06c |btb2||BTB/POZ domain protein Btb2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 284
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 1047 KFQANMFKKKVANRVNELVENIKNTHGFALYNLDFDRIKD 1086
+F + +F K + N LV N + L NL F+ IKD
Sbjct: 168 RFTSGLFNKAIQVMYNTLVSNWNTEYARLLCNLPFEVIKD 207
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 624 SQNPGNLKSSLPPCCTAQPTSHAGPSLSTPKNYTPALSHSFGTDQSSNYAPAPSYPAQNR 683
S+ P +S+P + PT+ G +++ YTP +H +SN P S A N
Sbjct: 343 SEQPMYSTASVPQQISNGPTAVNGLPMNS---YTPHSNHLHSPSPNSNSGPTDSLSAPNS 399
Query: 684 NPPKYRRQSSPTAFAS 699
++ +FAS
Sbjct: 400 TSSPSMAHANGASFAS 415
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 28.7 bits (61), Expect = 7.1
Identities = 51/271 (18%), Positives = 103/271 (38%), Gaps = 19/271 (7%)
Query: 275 SKSRRHDMDKHRMIRRTASFNLDSLSLDNV-----LTVESRTNNCSKKSPAI-DKTELLT 328
SK+++ + D + + + N D+ S N L+ ++ +N K I D L+
Sbjct: 750 SKNKKLENDLNLLTEKLNKKNADTESFKNTIREAELSKKALNDNLGNKENIISDLKNKLS 809
Query: 329 QSLMELLHLNDNNMKRKTFRLIDYMFDNLNDGGPSLNELASFCLNRLQNLFTLATLNKDT 388
+ L L + K I+ + + ++ L+ + S N+ L +
Sbjct: 810 EESTRLQELQSQLNQDKN--QIETLNERISAAADELSSMESINKNQANELKLAKQKCSNL 867
Query: 389 TETKEIISEVIKKSLIKFTQKNKLKLKTANLEDMTSKLINICKNNNVDTKNKVEIEIMAL 448
E +++ K+ K + K SK + K+ N K+ +
Sbjct: 868 QEKINFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELKTVKSENDSLKSVSNDD---- 923
Query: 449 MMKNDFTNNQAAEYTDQLIKQTCEKVFEGPPPM--YPRNYVVFQNTQNSIQGLNESDNFS 506
K NN+ + Q + + EK+ + + + QN ++Q L +SDN +
Sbjct: 924 QNKEKSVNNEKFKEVSQALAEANEKLNARDEEIERLKVDIIGLQNASLNMQSLKDSDNRT 983
Query: 507 VAPINERDIDINLKFYKNQLVQAVEQWLTSV 537
++ D++ K + +L +A E WL V
Sbjct: 984 IS-----DLESKNKELEKKLKEADEYWLLIV 1009
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 28.7 bits (61), Expect = 7.1
Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 1248 GDRHDSPYQQNIPYVNERREVTP--EQWFTLEETKAPPGLRDYQSIQATSQFPSCCQQTA 1305
G P + N P + ++TP + +++ + P L + Q +Q QQ A
Sbjct: 293 GTSPSPPVEMNFP---DTSDITPAYSEPEPIQDFWSDPTLDQQLAAQQAAQ--QAAQQQA 347
Query: 1306 SGAGQQELNQQSQVQTTPSSNIQRSHQLPPHYQQMSQVV 1344
A QQ QQ+Q+ ++ ++R +QQ + +
Sbjct: 348 ELAAQQAAAQQAQLAAQQAAEMERQRMAAQQHQQALEAI 386
>SPBC1709.12 |rid1||GTPase binding protein Rid1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 367
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 1477 SKRSIKLKPGQLGTPEDVLVTIQTGPKTESQVPPETPDIPEADDIPEEVEQAVNDQAYIT 1536
S RS+K G D L E + +TP P D++P+ E + Q +
Sbjct: 3 SLRSVKRLLGARSLSSDGLSESVNSSDREDSLSFQTPSTPSEDEMPQCFEDLIKPQVLSS 62
Query: 1537 PQSKEI 1542
SK +
Sbjct: 63 EASKSL 68
>SPCC622.10c |||exocyst complex subunit Sec5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 815
Score = 28.3 bits (60), Expect = 9.3
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 318 SPAIDKTELLTQSLMELLHLNDNNMKRKTFRLIDYMFDNLNDGGPSLNELASFCLNRLQN 377
S +I ++++L + LL+L + + F L + LN+ PSL+ S L LQ+
Sbjct: 628 STSITRSDVL-HFVTRLLNLRSRLVPYQKFLLQTFP---LNEVSPSLDPRISKSLRNLQD 683
Query: 378 LFTLATLNKDTTETKEIISEVIKKSLIKFTQKNKLKLKTANLE 420
L+ L + +DT+ + S + K S+ T + L+T LE
Sbjct: 684 LYKLLAI-RDTSFSNTTPSSISKLSIQPPTFQLFSTLETIYLE 725
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 28.3 bits (60), Expect = 9.3
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 5/119 (4%)
Query: 680 AQNRNPPKYRRQSSPTAFASGPMIHNAGSVGRMPIYAQAIPGGRLDYVQNIPHNMRRMSG 739
A N P ++ S+P A ++ + N + + ++ + ++ V +I ++ R
Sbjct: 269 AFNDFPEEFPNASNPEAHSNFTPL-NGNDESTVNMLSRLLSAAAIETVASIMNSEARNMD 327
Query: 740 SSNYASGTFVQNQLTDLSYNQISSLSPKGLGGNVIQNPVNNNLWEGRRMLGNFPASGES 798
S N A+G + + D S+ Q + G NV+QN N G + + P S S
Sbjct: 328 SQNMANGEPSRFRSVDGSFEQFLTDLRSGNLTNVLQNSSQN----GNDQISSDPESNSS 382
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 1309 GQQELNQQSQVQTTPSSNIQRSHQLPPHYQQ 1339
GQ ELN Q+++ S+N R+ Q+P ++QQ
Sbjct: 26 GQSELNTQNRIPYNTSAN-NRNWQIPLYWQQ 55
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.130 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,531,665
Number of Sequences: 5004
Number of extensions: 334362
Number of successful extensions: 1031
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 991
Number of HSP's gapped (non-prelim): 70
length of query: 1624
length of database: 2,362,478
effective HSP length: 83
effective length of query: 1541
effective length of database: 1,947,146
effective search space: 3000551986
effective search space used: 3000551986
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 60 (28.3 bits)
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