GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001345-TA|BGIBMGA001345-PA|undefined
         (62 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5K9N8 Cluster: Purine nucleotide binding protein, puta...    32   1.9  
UniRef50_A2FTG9 Cluster: Glycosyl hydrolases family 16 protein; ...    31   4.5  
UniRef50_Q9ZX54 Cluster: Gp23; n=1; Mycobacterium phage TM4|Rep:...    30   7.8  

>UniRef50_Q5K9N8 Cluster: Purine nucleotide binding protein,
           putative; n=1; Filobasidiella neoformans|Rep: Purine
           nucleotide binding protein, putative - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 1001

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 13  FRVTLTDRPPGEGHSTPYKNNREGAGRTPLEMRWSTTWAKK 53
           +R  L   PPG G +T      + AG TPLE+  S T +KK
Sbjct: 469 YRAVLISGPPGIGKTTSAHLMAKEAGYTPLELNASDTRSKK 509


>UniRef50_A2FTG9 Cluster: Glycosyl hydrolases family 16 protein;
           n=1; Trichomonas vaginalis G3|Rep: Glycosyl hydrolases
           family 16 protein - Trichomonas vaginalis G3
          Length = 382

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 16  TLTDRPPGEGHSTPYKNNREGA-GRTPLEMRWSTTWAKKTTGY 57
           T+T+  P E HST + N+ E   G TP +    + W K T  Y
Sbjct: 305 TVTNESPSESHSTSFNNSEESQNGNTPTQNPKQSNW-KNTLLY 346


>UniRef50_Q9ZX54 Cluster: Gp23; n=1; Mycobacterium phage TM4|Rep:
           Gp23 - Mycobacteriophage TM4
          Length = 784

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 16/49 (32%), Positives = 21/49 (42%)

Query: 11  QRFRVTLTDRPPGEGHSTPYKNNREGAGRTPLEMRWSTTWAKKTTGYES 59
           +R+RV  T  P G   + P+     GAG   LE+     W K   G  S
Sbjct: 418 KRYRVDFTTLPSGPFSAAPFDLTYSGAGSGYLELAGRAQWHKVNDGDRS 466


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.313    0.129    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,823,205
Number of Sequences: 1657284
Number of extensions: 2951142
Number of successful extensions: 3718
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3716
Number of HSP's gapped (non-prelim): 3
length of query: 62
length of database: 575,637,011
effective HSP length: 42
effective length of query: 20
effective length of database: 506,031,083
effective search space: 10120621660
effective search space used: 10120621660
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 65 (30.3 bits)