GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001345-TA|BGIBMGA001345-PA|undefined
         (62 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM411853-2|CAL69940.1|  538|Drosophila melanogaster cytochrome P...    27   4.1  
X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein ...    26   5.4  
AY089276-1|AAL90014.1|  259|Drosophila melanogaster AT07704p pro...    26   5.4  
AF291873-1|AAG01548.1|  533|Drosophila melanogaster DNA primase ...    26   5.4  
AF160895-1|AAD46835.1|  533|Drosophila melanogaster GM13640p pro...    26   5.4  
AE014296-3340|AAF51580.2|  533|Drosophila melanogaster CG5553-PA...    26   5.4  
AE013599-3155|AAF46693.1| 2515|Drosophila melanogaster CG9450-PA...    26   5.4  
AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD1916...    26   7.1  
AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA, ...    26   7.1  

>AM411853-2|CAL69940.1|  538|Drosophila melanogaster cytochrome P450
           Cyp18a1 protein.
          Length = 538

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 3   SLNITLIPQRFRVTLTDRPPGEGHSTPYKNNREGA 37
           ++  T+ P+ F+V L  RP G   + PY     GA
Sbjct: 503 NVGATITPESFKVCLKRRPLGPTAADPYHMRNVGA 537


>X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein
           protein.
          Length = 2515

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)

Query: 25  GHSTPYKNNREGAGRTPLE 43
           G S+P K NR+  GRTP++
Sbjct: 897 GMSSPRKGNRQQNGRTPIQ 915


>AY089276-1|AAL90014.1|  259|Drosophila melanogaster AT07704p
          protein.
          Length = 259

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 5  NITLIPQRFRVTLTDRPPGEGHSTPYK 31
          NITL+  R  V L++ PP E   TPYK
Sbjct: 55 NITLVHDRKYVALSNMPPIE--ETPYK 79


>AF291873-1|AAG01548.1|  533|Drosophila melanogaster DNA primase
           protein.
          Length = 533

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 22  PGEGHSTPYKNNREGAGRTPL 42
           PG+ H  PYKN  +G+ +T L
Sbjct: 387 PGDCHGCPYKNMDQGSLKTKL 407


>AF160895-1|AAD46835.1|  533|Drosophila melanogaster GM13640p
           protein.
          Length = 533

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 22  PGEGHSTPYKNNREGAGRTPL 42
           PG+ H  PYKN  +G+ +T L
Sbjct: 387 PGDCHGCPYKNMDQGSLKTKL 407


>AE014296-3340|AAF51580.2|  533|Drosophila melanogaster CG5553-PA
           protein.
          Length = 533

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 22  PGEGHSTPYKNNREGAGRTPL 42
           PG+ H  PYKN  +G+ +T L
Sbjct: 387 PGDCHGCPYKNMDQGSLKTKL 407


>AE013599-3155|AAF46693.1| 2515|Drosophila melanogaster CG9450-PA
           protein.
          Length = 2515

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)

Query: 25  GHSTPYKNNREGAGRTPLE 43
           G S+P K NR+  GRTP++
Sbjct: 897 GMSSPRKGNRQQNGRTPIQ 915


>AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD19168
           protein.
          Length = 1260

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 10  PQRFRVTLTDRPPGEGHSTPYKNNREGAGRTP 41
           PQ+ R TL+ +  GE  S P     EGAG TP
Sbjct: 256 PQKARETLSGKTIGEEQSVP---ALEGAGLTP 284


>AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA,
           isoform A protein.
          Length = 1260

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 10  PQRFRVTLTDRPPGEGHSTPYKNNREGAGRTP 41
           PQ+ R TL+ +  GE  S P     EGAG TP
Sbjct: 256 PQKARETLSGKTIGEEQSVP---ALEGAGLTP 284


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.313    0.129    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,710,831
Number of Sequences: 52641
Number of extensions: 135942
Number of successful extensions: 214
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 208
Number of HSP's gapped (non-prelim): 9
length of query: 62
length of database: 24,830,863
effective HSP length: 43
effective length of query: 19
effective length of database: 22,567,300
effective search space: 428778700
effective search space used: 428778700
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 53 (25.4 bits)