Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001344-TA|BGIBMGA001344-PA|IPR011009|Protein
kinase-like, IPR002290|Serine/threonine protein kinase,
IPR000719|Protein kinase, IPR008271|Serine/threonine protein kinase,
active site
         (255 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    49   3e-08
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.0  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   9.2  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 49.2 bits (112), Expect = 3e-08
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 3/94 (3%)

Query: 142 SMSHDIISGVDFLHSHRIVHRDLKPHNLLVTVAGRVKLADFGLAKTY---DVEMKLTSVV 198
           S++  +  G++ L   R+VHRDL   N+LV     VK++DFGL++     +V  K     
Sbjct: 596 SIARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSRDVYQDNVYCKNGGGK 655

Query: 199 VTLWYRPPEVLLGARYCSALDVWSAGCVLAQLHT 232
           + + +   E L   RY +  DVWS G +L ++ T
Sbjct: 656 LPVRWMALESLTHQRYTTYSDVWSFGVLLWEIVT 689


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/23 (43%), Positives = 11/23 (47%)

Query: 78  IALLRQLEAYRHPNIVRLLDVCH 100
           IA  R  E Y  P +  LLD  H
Sbjct: 188 IAKFRLQEGYHVPELCELLDAIH 210


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 92  IVRLLDVCHGGQCLERDQQLVLFLVF 117
           I+RL+ VC  G  +  +   VL L+F
Sbjct: 205 IMRLISVCLCGASVHSESSKVLPLLF 230


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.137    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,977
Number of Sequences: 317
Number of extensions: 2242
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 255
length of database: 114,650
effective HSP length: 55
effective length of query: 200
effective length of database: 97,215
effective search space: 19443000
effective search space used: 19443000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)